RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 BDP1A6H8Y1 2624 aa15.14■□□□□ 0.01
SQSTM1-202ENST00000389805 A0A1W2PPQ1 181 aa15.14■□□□□ 0.01
SQSTM1-202ENST00000389805 BCL2P10415 239 aa15.14■□□□□ 0.01
SQSTM1-202ENST00000389805 GNB2P62879 340 aa15.14■□□□□ 0.01
SQSTM1-202ENST00000389805 RTL6Q6ICC9 239 aa15.14■□□□□ 0.01
SQSTM1-202ENST00000389805 SRD5A3Q9H8P0 318 aa15.14■□□□□ 0.01
SQSTM1-202ENST00000389805 CELA3AP09093 270 aa15.13■□□□□ 0.01
SQSTM1-202ENST00000389805 CYB561P49447 251 aa15.13■□□□□ 0.01
SQSTM1-202ENST00000389805 ADGRG7Q96K78 797 aa15.13■□□□□ 0.01
SQSTM1-202ENST00000389805 SF3B5Q9BWJ5 86 aaKnown RBP15.13■□□□□ 0.01
SQSTM1-202ENST00000389805 PLA2G3Q9NZ20 509 aa15.13■□□□□ 0.01
SQSTM1-202ENST00000389805 GCGP01275 180 aa15.13■□□□□ 0.01
SQSTM1-202ENST00000389805 GNRHRP30968 328 aa15.13■□□□□ 0.01
SQSTM1-202ENST00000389805 PCP4P48539 62 aa15.13■□□□□ 0.01
SQSTM1-202ENST00000389805 ELLP55199 621 aaPredicted RBP15.13■□□□□ 0.01
SQSTM1-202ENST00000389805 PNRC1Q12796 327 aaPredicted RBP15.13■□□□□ 0.01
SQSTM1-202ENST00000389805 ABLIM2Q6H8Q1 611 aa15.13■□□□□ 0.01
SQSTM1-202ENST00000389805 TBC1D26Q86UD7 250 aa15.13■□□□□ 0.01
SQSTM1-202ENST00000389805 MED13Q9UHV7 2174 aa15.13■□□□□ 0.01
SQSTM1-202ENST00000389805 MARCH11A6NNE9 402 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 B4E171 279 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 TGOLN2O43493 480 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 TK1P04183 234 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 TSPAN7P41732 249 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 TDGF1P3P51864 188 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 TAS2R30P59541 319 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 RAB35Q15286 201 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 IZUMO4Q1ZYL8 232 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 CCDC71LQ8N9Z2 235 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 OR5T1Q8NG75 326 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 OR2V1Q8NHB1 315 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 MOB3AQ96BX8 217 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 FOXB1Q99853 325 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 TMEM242Q9NWH2 141 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 HMGB3O15347 200 aaKnown RBP15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 CDS2O95674 445 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 ACP1P24666 158 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 ZNF705AQ6ZN79 300 aaPredicted RBP15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 Q6ZPA2 131 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 RPUSD4Q96CM3 377 aaKnown RBP15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 A0A1B0GUS0 222 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 A0A1W2PNU3 283 aaPredicted RBP15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 PPP5D1E7EU14 171 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 CA11O75493 328 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 PPYP01298 95 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 WNT5AP41221 380 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 NUBP1P53384 320 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 ZNF92Q03936 586 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 SSPNQ14714 243 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 HERPUD1Q15011 391 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 SMIM7Q9BQ49 75 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 TMEM208Q9BTX3 173 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 TMEM222Q9H0R3 208 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 FOXJ2Q9P0K8 574 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 GOLT1BQ9Y3E0 138 aa15.12■□□□□ 0.01
SQSTM1-202ENST00000389805 GALR2O43603 387 aaPredicted RBP15.11■□□□□ 0.01
SQSTM1-202ENST00000389805 CD33P20138 364 aa15.11■□□□□ 0.01
SQSTM1-202ENST00000389805 ZNF726P1Q15940 193 aa15.11■□□□□ 0.01
SQSTM1-202ENST00000389805 KCNE4Q8WWG9 221 aa15.11■□□□□ 0.01
SQSTM1-202ENST00000389805 SIGLEC12Q96PQ1 595 aa15.11■□□□□ 0.01
SQSTM1-202ENST00000389805 ATP5SQ99766 215 aa15.11■□□□□ 0.01
SQSTM1-202ENST00000389805 WNT5BQ9H1J7 359 aa15.11■□□□□ 0.01
SQSTM1-202ENST00000389805 ZNF286AQ9HBT8 521 aa15.11■□□□□ 0.01
SQSTM1-202ENST00000389805 SELENOHQ8IZQ5 122 aaKnown RBP15.11■□□□□ 0.01
SQSTM1-202ENST00000389805 RBKSQ9H477 322 aa15.11■□□□□ 0.01
SQSTM1-202ENST00000389805 CISD1Q9NZ45 108 aaKnown RBP15.11■□□□□ 0.01
SQSTM1-202ENST00000389805 IGKV1-12A0A0C4DH73 117 aa15.1■□□□□ 0.01
SQSTM1-202ENST00000389805 A0A1W2PR80 420 aa15.1■□□□□ 0.01
SQSTM1-202ENST00000389805 C9orf172C9J069 976 aa15.1■□□□□ 0.01
SQSTM1-202ENST00000389805 IGKV1D-12P01611 117 aa15.1■□□□□ 0.01
SQSTM1-202ENST00000389805 PFN1P07737 140 aaKnown RBP15.1■□□□□ 0.01
SQSTM1-202ENST00000389805 CST2P09228 141 aa15.1■□□□□ 0.01
SQSTM1-202ENST00000389805 CPT1CQ8TCG5 803 aa15.1■□□□□ 0.01
SQSTM1-202ENST00000389805 SLC7A10Q9NS82 523 aa15.1■□□□□ 0.01
SQSTM1-202ENST00000389805 SERPINA7P05543 415 aa15.1■□□□□ 0.01
SQSTM1-202ENST00000389805 CCL2P13500 99 aa15.1■□□□□ 0.01
SQSTM1-202ENST00000389805 GALR1P47211 349 aa15.1■□□□□ 0.01
SQSTM1-202ENST00000389805 Q6ZSR3 168 aa15.1■□□□□ 0.01
SQSTM1-202ENST00000389805 SLC25A26Q70HW3 274 aa15.1■□□□□ 0.01
SQSTM1-202ENST00000389805 TMEM18Q96B42 140 aa15.1■□□□□ 0.01
SQSTM1-202ENST00000389805 ZNF442Q9H7R0 627 aa15.1■□□□□ 0.01
SQSTM1-202ENST00000389805 GPR35Q9HC97 309 aa15.1■□□□□ 0.01
SQSTM1-202ENST00000389805 DTYMKP23919 212 aa15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 FOXG1P55316 489 aaPredicted RBP15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 ERVFC1-1P60608 527 aa15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 BATFQ16520 125 aa15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 OR2H1Q9GZK4 316 aa15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 DIDO1Q9BTC0 2240 aaKnown RBP15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 DOCK11Q5JSL3 2073 aa15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 A0A096LPE4 126 aa15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 A0A1W2PPZ6 126 aa15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 OR6C6A6NF89 314 aa15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 IFNA5P01569 189 aa15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 IGHEP01854 428 aa15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 MPLP40238 635 aa15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 TESK1Q15569 626 aa15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 IQCJQ1A5X6 159 aa15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 CPEB3Q8NE35 698 aaKnown RBP15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 PIGCQ92535 297 aa15.09■□□□□ 0.01
SQSTM1-202ENST00000389805 Q9N2K0 584 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms