RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 HIST1H2BMQ99879 126 aa11.36□□□□□ -0.59
TRAPPC9-201ENST00000389328 RFNGQ9Y644 331 aa11.36□□□□□ -0.59
TRAPPC9-201ENST00000389328 M0R1X1 148 aa11.36□□□□□ -0.59
TRAPPC9-201ENST00000389328 IGHEP01854 428 aa11.36□□□□□ -0.59
TRAPPC9-201ENST00000389328 HOXA6P31267 233 aa11.36□□□□□ -0.59
TRAPPC9-201ENST00000389328 THBS3P49746 956 aa11.36□□□□□ -0.59
TRAPPC9-201ENST00000389328 ZNF576Q9H609 170 aa11.36□□□□□ -0.59
TRAPPC9-201ENST00000389328 TMEM30CPA0ZSE6 113 aa11.36□□□□□ -0.59
TRAPPC9-201ENST00000389328 HRASP01112 189 aa11.36□□□□□ -0.59
TRAPPC9-201ENST00000389328 CD46P15529 392 aa11.36□□□□□ -0.59
TRAPPC9-201ENST00000389328 CDCP2Q5VXM1 449 aa11.36□□□□□ -0.59
TRAPPC9-201ENST00000389328 DEFB108BQ8NET1 73 aa11.36□□□□□ -0.59
TRAPPC9-201ENST00000389328 MRGPRDQ8TDS7 321 aa11.36□□□□□ -0.59
TRAPPC9-201ENST00000389328 SSMEM1Q8WWF3 244 aa11.36□□□□□ -0.59
TRAPPC9-201ENST00000389328 S1PR3Q99500 378 aa11.36□□□□□ -0.59
TRAPPC9-201ENST00000389328 RAB9BQ9NP90 201 aa11.36□□□□□ -0.59
TRAPPC9-201ENST00000389328 RPLP1P05386 114 aaKnown RBP11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 MPZP25189 248 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 PTTG1IPP53801 180 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 CASP6P55212 293 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 ZNF506Q5JVG8 444 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 Q6ZN92 141 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 OR10S1Q8NGN2 331 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 VWCEQ96DN2 955 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 GALNT14Q96FL9 552 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 HEATR5AQ86XA9 2040 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 LINC01387J3KSC0 135 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 PGLYRP1O75594 196 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 HIST1H1BP16401 226 aaKnown RBP11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 MST1LQ2TV78 715 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 HEPN1Q6WQI6 88 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 WBP1LQ9NX94 342 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 ZNF253O75346 499 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 SRFP11831 508 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 ATP6V1FQ16864 119 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 PYY3Q5JQD4 70 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 MOB1BQ7L9L4 216 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 OR5AU1Q8NGC0 362 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 SCN8AQ9UQD0 1980 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 SHISA7A6NL88 538 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 GCGP01275 180 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 EGR1P18146 543 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 PMELP40967 661 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 ACSM6Q6P461 480 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 ABHD5Q8WTS1 349 aa11.35□□□□□ -0.59
TRAPPC9-201ENST00000389328 LRRC3CA6NJW4 275 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 NPIPB7O75200 414 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 NDUFB4O95168 129 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 IER3P46695 156 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 TMPRSS7Q7RTY8 843 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 OCIAD1Q9NX40 245 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 GOLT1BQ9Y3E0 138 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 EP300Q09472 2414 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 CACNA1GO43497 2377 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 LOC102723971A0A1B0GUV8 181 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 CDIPTO14735 213 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 CXCL1P09341 107 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 UBE2G1P62253 170 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 MARS2Q96GW9 593 aaKnown RBP11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 GPR35Q9HC97 309 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 FSCN3Q9NQT6 498 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 H0Y980 276 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 RRP8O43159 456 aaKnown RBP11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 OR10J4P0C629 311 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 SRD5A2P31213 254 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 RTP5Q14D33 572 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 ELOBQ15370 118 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 ETFRF1Q6IPR1 90 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 OR4C5Q8NGB2 326 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 TAF15Q92804 592 aaKnown RBP eCLIP11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 MUCL1Q96DR8 90 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 LRFN3Q9BTN0 628 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 NAGKQ9UJ70 344 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 SIT1Q9Y3P8 196 aa11.34□□□□□ -0.59
TRAPPC9-201ENST00000389328 CA11O75493 328 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 OR5G3P0C626 314 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 LIFP15018 202 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 MPLP40238 635 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 SRSF4Q08170 494 aaKnown RBP11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 MZT1Q08AG7 82 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 CARFQ8N187 725 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 RCC1LQ96I51 464 aaKnown RBP11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 HSPB9Q9BQS6 159 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 PLA2G3Q9NZ20 509 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 CISD1Q9NZ45 108 aaKnown RBP11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 TCF21O43680 179 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 GNG4P50150 75 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 TMEM183AQ8IXX5 376 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 MESP1Q9BRJ9 268 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 SF3B5Q9BWJ5 86 aaKnown RBP11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 DBX1A6NMT0 343 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 SNURFLB1AK76 121 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 TAS2R45P59539 299 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 TAS2R60P59551 318 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 SLC24A4Q8NFF2 622 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 EDARADDQ8WWZ3 215 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 TM2D1Q9BX74 207 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 FBLN5Q9UBX5 448 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 ABCA7Q8IZY2 2146 aa11.33□□□□□ -0.6
TRAPPC9-201ENST00000389328 TCF20Q9UGU0 1960 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms