RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 POM121Q96HA1 1249 aa7.31□□□□□ -1.24
VPS36-201ENST00000378060 BARX1Q9HBU1 254 aaPredicted RBP7.31□□□□□ -1.24
VPS36-201ENST00000378060 EML5Q05BV3 1969 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 BCL3P20749 454 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 G0S2P27469 103 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 NHLH2Q02577 135 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 OR5I1Q13606 314 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 UCN2Q96RP3 112 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 CXorf65A6NEN9 183 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 DEFB108AA8MXU0 73 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 GYPAP02724 150 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 SLC25A5P05141 298 aaKnown RBP7.3□□□□□ -1.24
VPS36-201ENST00000378060 IGHV4-34P06331 123 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 FCER1GP30273 86 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 OPRK1P41145 380 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 STARD6P59095 220 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 SLC25A47Q6Q0C1 308 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 APOBEC4Q8WW27 367 aaKnown RBP7.3□□□□□ -1.24
VPS36-201ENST00000378060 PLPPR2Q96GM1 343 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 TMEM222Q9H0R3 208 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 CDK2AP1O14519 115 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 SLC31A2O15432 143 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 F12P00748 615 aaPredicted RBP7.3□□□□□ -1.24
VPS36-201ENST00000378060 CCL3P10147 92 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 CCL2P13500 99 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 OR10J1P30954 320 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 IGLV3-21P80748 117 aaPredicted RBP7.3□□□□□ -1.24
VPS36-201ENST00000378060 MRPS11P82912 194 aaKnown RBP7.3□□□□□ -1.24
VPS36-201ENST00000378060 Q5BKY6 102 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 LINC00518Q8N0U6 118 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 OR4F17Q8NGA8 305 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 ZNF519Q8TB69 540 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 SCARF2Q96GP6 870 aaPredicted RBP7.3□□□□□ -1.24
VPS36-201ENST00000378060 TMEM204Q9BSN7 226 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 TCFL5Q9UL49 500 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 SPTBN2O15020 2390 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 TEX50A0A1B0GTY4 177 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 C4orf51C9J302 202 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 PAGE4O60829 102 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 CYB5R3P00387 301 aaPredicted RBP7.3□□□□□ -1.24
VPS36-201ENST00000378060 HLA-DRB5Q30154 266 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 RNASEKQ6P5S7 137 aaKnown RBP7.3□□□□□ -1.24
VPS36-201ENST00000378060 ZNF383Q8NA42 475 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 ZNF501Q96CX3 271 aaPredicted RBP7.3□□□□□ -1.24
VPS36-201ENST00000378060 GMPPAQ96IJ6 420 aaPredicted RBP7.3□□□□□ -1.24
VPS36-201ENST00000378060 RNF122Q9H9V4 155 aa7.3□□□□□ -1.24
VPS36-201ENST00000378060 SEBOXQ9HB31 216 aaPredicted RBP7.3□□□□□ -1.24
VPS36-201ENST00000378060 A0A0G2JK05 382 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 H0Y980 276 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 HAND1O96004 215 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 MT-CO3P00414 261 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 TMEM11P17152 192 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 PTTG1IPP53801 180 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 PRSS12P56730 875 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 KLF3P57682 345 aaPredicted RBP7.29□□□□□ -1.24
VPS36-201ENST00000378060 ACSM6Q6P461 480 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 PET117Q6UWS5 81 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 LRP11Q86VZ4 500 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 LDLRAD3Q86YD5 345 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 OR5AU1Q8NGC0 362 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 ZNF385AQ96PM9 386 aaKnown RBP7.29□□□□□ -1.24
VPS36-201ENST00000378060 HDHD3Q9BSH5 251 aaPredicted RBP7.29□□□□□ -1.24
VPS36-201ENST00000378060 ARRDC1-AS1Q9H2J1 176 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 IGKV1D-42A0A075B6H8 117 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 LRRC3CA6NJW4 275 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 TMEM210A6NLX4 147 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 TMEM14DPA8MWL7 114 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 HOXD4P09016 255 aaPredicted RBP7.29□□□□□ -1.24
VPS36-201ENST00000378060 HKR1P10072 659 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 FGF12P61328 243 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 UBE2L3P68036 154 aaKnown RBP7.29□□□□□ -1.24
VPS36-201ENST00000378060 FNDC7Q5VTL7 733 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 LAMTOR1Q6IAA8 161 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 DHRS7BQ6IAN0 325 aaPredicted RBP7.29□□□□□ -1.24
VPS36-201ENST00000378060 CYB561D1Q8N8Q1 229 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 MOB3AQ96BX8 217 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 P2RX4Q99571 388 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 FUT9Q9Y231 359 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 CDIPTO14735 213 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 MPDU1O75352 247 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 CXorf1O96002 111 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 ELOBQ15370 118 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 DEFB109BQ30KR1 87 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 TUSC5Q8IXB3 177 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 STXBP6Q8NFX7 210 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 RGP1Q92546 391 aaPredicted RBP7.29□□□□□ -1.24
VPS36-201ENST00000378060 OR10C1Q96KK4 312 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 TMEM191AQ9H0A3 160 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 ESRP2Q9H6T0 727 aaKnown RBP7.29□□□□□ -1.24
VPS36-201ENST00000378060 FAM206AQ9NX38 181 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 PRNDQ9UKY0 176 aa7.29□□□□□ -1.24
VPS36-201ENST00000378060 IGHV3-43A0A0B4J1X8 118 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 A0A1W2PP11 408 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 ZNF205O95201 554 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 SP1P08047 785 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 IGHV3-43DP0DP04 118 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 USF1P22415 310 aaPredicted RBP7.28□□□□□ -1.24
VPS36-201ENST00000378060 TMEM255AQ5JRV8 349 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 ZNF880Q6PDB4 577 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 MOB3BQ86TA1 216 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms