RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 TEX36Q5VZQ5 186 aa14.74□□□□□ -0.05
CTTN-203ENST00000376561 TRAT1Q6PIZ9 186 aa14.74□□□□□ -0.05
CTTN-203ENST00000376561 MEX3BQ6ZN04 569 aaKnown RBP14.74□□□□□ -0.05
CTTN-203ENST00000376561 RNF126Q9BV68 326 aa14.74□□□□□ -0.05
CTTN-203ENST00000376561 MS4A5Q9H3V2 200 aa14.74□□□□□ -0.05
CTTN-203ENST00000376561 FBXO9Q9UK97 447 aaPredicted RBP14.74□□□□□ -0.05
CTTN-203ENST00000376561 UBE2J1Q9Y385 318 aaPredicted RBP14.74□□□□□ -0.05
CTTN-203ENST00000376561 RBM7Q9Y580 266 aaKnown RBP14.74□□□□□ -0.05
CTTN-203ENST00000376561 HCFC1P51610 2035 aa14.74□□□□□ -0.05
CTTN-203ENST00000376561 MEX3AA1L020 520 aaKnown RBP14.74□□□□□ -0.05
CTTN-203ENST00000376561 B9A039 149 aa14.74□□□□□ -0.05
CTTN-203ENST00000376561 OR8U9P0C7N5 309 aa14.74□□□□□ -0.05
CTTN-203ENST00000376561 SELLP14151 372 aa14.74□□□□□ -0.05
CTTN-203ENST00000376561 S100GP29377 79 aa14.74□□□□□ -0.05
CTTN-203ENST00000376561 SRPXP78539 464 aa14.74□□□□□ -0.05
CTTN-203ENST00000376561 OR52L2PQ8NGH6 319 aa14.74□□□□□ -0.05
CTTN-203ENST00000376561 OR8U1Q8NH10 309 aa14.74□□□□□ -0.05
CTTN-203ENST00000376561 ARL11Q969Q4 196 aa14.74□□□□□ -0.05
CTTN-203ENST00000376561 HIVEP3Q5T1R4 2406 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 H0YIZ8 118 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 C15orf65H3BRN8 121 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 RAB32Q13637 225 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 TMEM268Q5VZI3 342 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 SLC35G3Q8N808 338 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 ZNF680Q8NEM1 530 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 OR5D13Q8NGL4 314 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 AKR1E2Q96JD6 320 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 TMEM56Q96MV1 263 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 TOLLIPQ9H0E2 274 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 TMEM56-RWDD3S4R434 201 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 ARFGEF3Q5TH69 2177 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 RNF222A6NCQ9 220 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 DEFB108AA8MXU0 73 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 GYPAP02724 150 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 F2RP25116 425 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 P2RX3P56373 397 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 EDDM3BP56851 147 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 ZNF345Q14585 488 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 GNMTQ14749 295 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 NDUFA5Q16718 116 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 CR1LQ2VPA4 569 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 RFESDQ8TAC1 157 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 NINJ1Q92982 152 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 GAFA1Q96PS6 74 aa14.73□□□□□ -0.05
CTTN-203ENST00000376561 A0A0D9SG52 128 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 A0A1B0GW55 424 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 H0Y980 276 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 SPINT2O43291 252 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 OR2F2O95006 317 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 CDS2O95674 445 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 DUX4L2P0CJ85 424 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 DUX4L3P0CJ86 424 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 DUX4L4P0CJ87 422 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 DUX4L5P0CJ88 424 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 DUX4L6P0CJ89 424 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 DUX4L7P0CJ90 424 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 GZMHP20718 246 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 UCP1P25874 307 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 UQCRFS1P47985 274 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 OR2F1Q13607 317 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 FAM53AQ6NSI3 398 aaPredicted RBP14.72□□□□□ -0.05
CTTN-203ENST00000376561 DUX4L9Q6RFH8 374 aaPredicted RBP14.72□□□□□ -0.05
CTTN-203ENST00000376561 ZNF788Q6ZQV5 615 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 ACOT7LQ6ZUV0 252 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 FAM219AQ8IW50 185 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 ZNF665Q9H7R5 613 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 DUX4Q9UBX2 424 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 KCNS2Q9ULS6 477 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 TMED3Q9Y3Q3 217 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 ACACBO00763 2458 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 LOXP28300 417 aaPredicted RBP14.72□□□□□ -0.05
CTTN-203ENST00000376561 ZNF672Q499Z4 452 aaPredicted RBP14.72□□□□□ -0.05
CTTN-203ENST00000376561 C4orf17Q53FE4 359 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 PRSS54Q6PEW0 395 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 ZNF695Q8IW36 515 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 SLC7A5P1Q8MH63 180 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 C1orf87Q8N0U7 546 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 KCNRGQ8N5I3 272 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 DCUN1D4Q92564 292 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 CCL13Q99616 98 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 OR2S2Q9NQN1 319 aa14.72□□□□□ -0.05
CTTN-203ENST00000376561 TMEM178BH3BS89 294 aa14.71□□□□□ -0.05
CTTN-203ENST00000376561 CFDP00746 253 aaPredicted RBP14.71□□□□□ -0.05
CTTN-203ENST00000376561 PET100P0DJ07 73 aa14.71□□□□□ -0.05
CTTN-203ENST00000376561 LYL1P12980 280 aa14.71□□□□□ -0.05
CTTN-203ENST00000376561 GNLYP22749 145 aa14.71□□□□□ -0.05
CTTN-203ENST00000376561 HTD2P86397 168 aa14.71□□□□□ -0.05
CTTN-203ENST00000376561 SWI5Q1ZZU3 235 aa14.71□□□□□ -0.05
CTTN-203ENST00000376561 TMEM204Q9BSN7 226 aa14.71□□□□□ -0.05
CTTN-203ENST00000376561 NCOR1P1Q9H4R4 102 aa14.71□□□□□ -0.05
CTTN-203ENST00000376561 OR5AC2Q9NZP5 309 aa14.71□□□□□ -0.05
CTTN-203ENST00000376561 RP2O75695 350 aa14.7□□□□□ -0.06
CTTN-203ENST00000376561 WNT2P09544 360 aa14.7□□□□□ -0.06
CTTN-203ENST00000376561 PPP1CCP36873 323 aaKnown RBP14.7□□□□□ -0.06
CTTN-203ENST00000376561 S100A10P60903 97 aa14.7□□□□□ -0.06
CTTN-203ENST00000376561 SELENOHQ8IZQ5 122 aaKnown RBP14.7□□□□□ -0.06
CTTN-203ENST00000376561 MUC15Q8N387 334 aa14.7□□□□□ -0.06
CTTN-203ENST00000376561 FAM216BQ8N7L0 139 aa14.7□□□□□ -0.06
CTTN-203ENST00000376561 INO80EQ8NBZ0 244 aaPredicted RBP14.7□□□□□ -0.06
CTTN-203ENST00000376561 OR51H1Q8NH63 302 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms