RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 OR4C12Q96R67 309 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 NRN1Q9NPD7 142 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 CISD1Q9NZ45 108 aaKnown RBP10.24□□□□□ -0.77
PTPN1-201ENST00000371621 CRYABP02511 175 aaKnown RBP10.24□□□□□ -0.77
PTPN1-201ENST00000371621 CDKN1AP38936 164 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 GNG4P50150 75 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 HYAL1Q12794 435 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 MYBPHQ13203 477 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 H2BFWTQ7Z2G1 175 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 SSMEM1Q8WWF3 244 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 KIR3DX1Q9H7L2 352 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 WNT16Q9UBV4 365 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 RBBP6Q7Z6E9 1792 aaKnown RBP10.24□□□□□ -0.77
PTPN1-201ENST00000371621 KIR2DS1A0A191URI9 304 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 CHEK1O14757 476 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 KIR2DS4P43632 304 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 EIF3IQ13347 325 aaKnown RBP10.23□□□□□ -0.77
PTPN1-201ENST00000371621 KIR2DS1Q14954 304 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 BPIFA4PQ86YQ2 179 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 OR2V1Q8NHB1 315 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 ICAM5Q9UMF0 924 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 IGHV3-15A0A0B4J1V0 119 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 GJE1A6NN92 205 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 TRDCB7Z8K6 153 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 SYNGR4O95473 234 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 ABHD16AO95870 558 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 PATE4P0C8F1 98 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 SRP14P37108 136 aaKnown RBP10.23□□□□□ -0.77
PTPN1-201ENST00000371621 SHBQ15464 509 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 MUC15Q8N387 334 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 PTX4Q96A99 478 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 TOX2Q96NM4 488 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 PMCHL2Q9BQD1 86 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 CST9LQ9H4G1 147 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 VSIRQ9H7M9 311 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 C1QTNF9P0C862 333 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 GPM6AP51674 278 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 GRB2P62993 217 aaKnown RBP10.23□□□□□ -0.77
PTPN1-201ENST00000371621 DPTQ07507 201 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 OCIAD2Q56VL3 154 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 CYP2G1PQ6ZSU1 146 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 ATG4DQ86TL0 474 aaPredicted RBP10.23□□□□□ -0.77
PTPN1-201ENST00000371621 OR8B3Q8NGG8 313 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 ZNF236Q9UL36 1845 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 NKX6-3A6NJ46 265 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 TMEM238C9JI98 176 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 CA3P07451 260 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 OR5AL1P0C617 328 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 MFAP2P55001 183 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 PAQR4Q8N4S7 273 aaPredicted RBP10.23□□□□□ -0.77
PTPN1-201ENST00000371621 WDYHV1Q96HA8 205 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 MOB1AQ9H8S9 216 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 ANK1P16157 1881 aa10.23□□□□□ -0.77
PTPN1-201ENST00000371621 HTTP42858 3142 aa10.22□□□□□ -0.77
PTPN1-201ENST00000371621 DOCK7Q96N67 2140 aa10.22□□□□□ -0.77
PTPN1-201ENST00000371621 TRAV38-1A0A0B4J264 116 aa10.22□□□□□ -0.77
PTPN1-201ENST00000371621 OR10J4P0C629 311 aa10.22□□□□□ -0.77
PTPN1-201ENST00000371621 MRPS11P82912 194 aaKnown RBP10.22□□□□□ -0.77
PTPN1-201ENST00000371621 TM4SF20Q53R12 229 aa10.22□□□□□ -0.77
PTPN1-201ENST00000371621 SLC25A34Q6PIV7 304 aa10.22□□□□□ -0.77
PTPN1-201ENST00000371621 C12orf54Q6X4T0 127 aa10.22□□□□□ -0.77
PTPN1-201ENST00000371621 GATAD1Q8WUU5 269 aa10.22□□□□□ -0.77
PTPN1-201ENST00000371621 TMEM191AQ9H0A3 160 aa10.22□□□□□ -0.77
PTPN1-201ENST00000371621 INSL6Q9Y581 213 aa10.22□□□□□ -0.77
PTPN1-201ENST00000371621 DOPEY2Q9Y3R5 2298 aa10.22□□□□□ -0.77
PTPN1-201ENST00000371621 GAGE12BA1L429 117 aa10.22□□□□□ -0.77
PTPN1-201ENST00000371621 ERVK-16P61578 105 aa10.22□□□□□ -0.77
PTPN1-201ENST00000371621 KIAA0895LQ68EN5 471 aa10.22□□□□□ -0.77
PTPN1-201ENST00000371621 TRIB1Q96RU8 372 aa10.22□□□□□ -0.77
PTPN1-201ENST00000371621 DEFB126Q9BYW3 111 aa10.22□□□□□ -0.77
PTPN1-201ENST00000371621 GAGE1Q13065 139 aa10.22□□□□□ -0.77
PTPN1-201ENST00000371621 TMEM187Q14656 261 aa10.22□□□□□ -0.77
PTPN1-201ENST00000371621 ZIC1Q15915 447 aa10.22□□□□□ -0.77
PTPN1-201ENST00000371621 C19orf25Q9UFG5 118 aaPredicted RBP10.22□□□□□ -0.77
PTPN1-201ENST00000371621 PTPRDP23468 1912 aa10.22□□□□□ -0.77
PTPN1-201ENST00000371621 CASP8AP2Q9UKL3 1982 aa10.21□□□□□ -0.77
PTPN1-201ENST00000371621 RGPD3A6NKT7 1758 aaPredicted RBP10.21□□□□□ -0.77
PTPN1-201ENST00000371621 RGPD4Q7Z3J3 1758 aa10.21□□□□□ -0.77
PTPN1-201ENST00000371621 CTXND1A0A1B0GTU2 59 aa10.21□□□□□ -0.77
PTPN1-201ENST00000371621 ZNHIT1O43257 154 aa10.21□□□□□ -0.77
PTPN1-201ENST00000371621 PIAS2O75928 621 aa10.21□□□□□ -0.77
PTPN1-201ENST00000371621 G6PCP35575 357 aa10.21□□□□□ -0.77
PTPN1-201ENST00000371621 FUT6P51993 359 aa10.21□□□□□ -0.77
PTPN1-201ENST00000371621 ZNF137PP52743 207 aa10.21□□□□□ -0.77
PTPN1-201ENST00000371621 MPV17L2Q567V2 206 aa10.21□□□□□ -0.77
PTPN1-201ENST00000371621 OR8B2Q96RD0 313 aa10.21□□□□□ -0.77
PTPN1-201ENST00000371621 WDR54Q9H977 334 aa10.21□□□□□ -0.77
PTPN1-201ENST00000371621 GPR27Q9NS67 375 aa10.21□□□□□ -0.77
PTPN1-201ENST00000371621 SLC45A2Q9UMX9 530 aa10.21□□□□□ -0.77
PTPN1-201ENST00000371621 ZNF407Q9C0G0 2248 aa10.21□□□□□ -0.77
PTPN1-201ENST00000371621 WDR87Q6ZQQ6 2873 aa10.21□□□□□ -0.77
PTPN1-201ENST00000371621 IGKV1D-8A0A087WSZ0 117 aa10.21□□□□□ -0.78
PTPN1-201ENST00000371621 PSG2P11465 335 aa10.21□□□□□ -0.78
PTPN1-201ENST00000371621 FOXK1P85037 733 aa10.21□□□□□ -0.78
PTPN1-201ENST00000371621 SRYQ05066 204 aa10.21□□□□□ -0.78
PTPN1-201ENST00000371621 PRSS8Q16651 343 aa10.21□□□□□ -0.78
PTPN1-201ENST00000371621 RNF144BQ7Z419 303 aa10.21□□□□□ -0.78
PTPN1-201ENST00000371621 HSPB7Q9UBY9 170 aa10.21□□□□□ -0.78
PTPN1-201ENST00000371621 RLFQ13129 1914 aa10.21□□□□□ -0.78
PTPN1-201ENST00000371621 OR5B21A6NL26 309 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms