RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 SCTP09683 121 aa13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 ZNF658BQ4V348 819 aaPredicted RBP13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 RHBDD1Q8TEB9 315 aa13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 HIST1H2BLQ99880 126 aa13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 IGHV1OR21-1A0A087WYE8 117 aa13.85□□□□□ -0.19
CLSTN1-201ENST00000361311 M0R2Z0 102 aa13.85□□□□□ -0.19
CLSTN1-201ENST00000361311 MPLP40238 635 aa13.85□□□□□ -0.19
CLSTN1-201ENST00000361311 KIR2DL1P43626 348 aaPredicted RBP13.85□□□□□ -0.19
CLSTN1-201ENST00000361311 OR4X1Q8NH49 305 aa13.85□□□□□ -0.19
CLSTN1-201ENST00000361311 UCN2Q96RP3 112 aa13.85□□□□□ -0.19
CLSTN1-201ENST00000361311 LNP1A1A4G5 178 aa13.85□□□□□ -0.19
CLSTN1-201ENST00000361311 CXCL1P09341 107 aa13.85□□□□□ -0.19
CLSTN1-201ENST00000361311 CA6P23280 308 aa13.85□□□□□ -0.19
CLSTN1-201ENST00000361311 RAC1P63000 192 aa13.85□□□□□ -0.19
CLSTN1-201ENST00000361311 ACSM6Q6P461 480 aa13.85□□□□□ -0.19
CLSTN1-201ENST00000361311 ZNF385AQ96PM9 386 aaKnown RBP13.85□□□□□ -0.19
CLSTN1-201ENST00000361311 FCGR3BO75015 233 aa13.85□□□□□ -0.19
CLSTN1-201ENST00000361311 CAMPP49913 170 aa13.85□□□□□ -0.19
CLSTN1-201ENST00000361311 GPR146Q96CH1 333 aa13.85□□□□□ -0.19
CLSTN1-201ENST00000361311 C14orf144Q96I85 54 aa13.85□□□□□ -0.19
CLSTN1-201ENST00000361311 SLC45A2Q9UMX9 530 aa13.85□□□□□ -0.19
CLSTN1-201ENST00000361311 GVINP1Q7Z2Y8 2422 aa13.85□□□□□ -0.19
CLSTN1-201ENST00000361311 CCL20P78556 96 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 SLC25A47Q6Q0C1 308 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 J3QR89 54 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 M0R1X1 148 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 IGHEP01854 428 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 SOD3P08294 240 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 PLGLAQ15195 96 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 Q8IYB0 196 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 ADIPOR1Q96A54 375 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 RCC1LQ96I51 464 aaKnown RBP13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 RNF24Q9Y225 148 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 TDRD6O60522 2096 aaKnown RBP13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 LOC390937A0A1W2PQ73 354 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 PIAS2O75928 621 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 SNRPCP09234 159 aaKnown RBP13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 HINT1P49773 126 aaPredicted RBP13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 UCP3P55916 312 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 WIPI1Q5MNZ9 446 aaPredicted RBP13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 SPRED2Q7Z698 418 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 CLDND2Q8NHS1 167 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 FOXD3Q9UJU5 478 aaPredicted RBP13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 IGKV1D-43A0A0B4J1Z2 117 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 GRIFINA4D1Z8 144 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 K7N7A8 449 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 CT45A6P0DMU7 189 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 CT45A5P0DMU8 189 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 CT45A7P0DMV0 189 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 SPATA45Q537H7 98 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 CT45A1Q5HYN5 189 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 CT45A3Q8NHU0 189 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 UQCR10Q9UDW1 63 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 PSG11Q9UQ72 335 aa13.84□□□□□ -0.19
CLSTN1-201ENST00000361311 CASP8AP2Q9UKL3 1982 aa13.83□□□□□ -0.19
CLSTN1-201ENST00000361311 FGF5P12034 268 aa13.83□□□□□ -0.19
CLSTN1-201ENST00000361311 ICAM4Q14773 271 aa13.83□□□□□ -0.19
CLSTN1-201ENST00000361311 IZUMO4Q1ZYL8 232 aa13.83□□□□□ -0.19
CLSTN1-201ENST00000361311 LINC00696Q6ZRV3 163 aa13.83□□□□□ -0.19
CLSTN1-201ENST00000361311 MISP3Q96FF7 219 aa13.83□□□□□ -0.19
CLSTN1-201ENST00000361311 LRFN3Q9BTN0 628 aa13.83□□□□□ -0.19
CLSTN1-201ENST00000361311 CLN8Q9UBY8 286 aa13.83□□□□□ -0.19
CLSTN1-201ENST00000361311 KLF2Q9Y5W3 355 aaPredicted RBP13.83□□□□□ -0.19
CLSTN1-201ENST00000361311 ZDBF2Q9HCK1 2354 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 MPDZO75970 2070 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 IGHMP01871 453 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 SSMEM1Q8WWF3 244 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 RASL10BQ96S79 203 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 TMEM204Q9BSN7 226 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 SDF2L1Q9HCN8 221 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 DCAF16Q9NXF7 216 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 MTCL1Q9Y4B5 1905 aaKnown RBP13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 APC2O95996 2303 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 SUPT4H1P63272 117 aaKnown RBP13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 IGLV3-21P80748 117 aaPredicted RBP13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 HIST3H3Q16695 136 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 MST1LQ2TV78 715 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 PLPPR5Q32ZL2 321 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 FAM166AQ6J272 317 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 CFHR5Q9BXR6 569 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 FBLN5Q9UBX5 448 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 WIPI2Q9Y4P8 454 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 DEFB108AA8MXU0 73 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 C9JQL5 133 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 TMEM250H0YL14 139 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 FOXL2P58012 376 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 CYP2G1PQ6ZSU1 146 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 OR5D13Q8NGL4 314 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 IFI44Q8TCB0 444 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 GTF3AQ92664 365 aaKnown RBP13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 CRISPLD2Q9H0B8 497 aa13.83□□□□□ -0.2
CLSTN1-201ENST00000361311 SDK2Q58EX2 2172 aa13.82□□□□□ -0.2
CLSTN1-201ENST00000361311 IGHV2-70P01814 119 aa13.82□□□□□ -0.2
CLSTN1-201ENST00000361311 VASH2Q86V25 355 aa13.82□□□□□ -0.2
CLSTN1-201ENST00000361311 OR5B21A6NL26 309 aa13.82□□□□□ -0.2
CLSTN1-201ENST00000361311 HPRT1P00492 218 aa13.82□□□□□ -0.2
CLSTN1-201ENST00000361311 G6PCP35575 357 aa13.82□□□□□ -0.2
CLSTN1-201ENST00000361311 Q56UQ5 140 aa13.82□□□□□ -0.2
CLSTN1-201ENST00000361311 VHLLQ6RSH7 139 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms