RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 ZNF355PQ9NSJ1 428 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 UQCR10Q9UDW1 63 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 LOC102724200A0A096LPH7 203 aaPredicted RBP12.12□□□□□ -0.47
SMC5-201ENST00000361138 PMS2P1A4D2B8 440 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 RNPS1Q15287 305 aaKnown RBP12.12□□□□□ -0.47
SMC5-201ENST00000361138 Q6ZS52 159 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 Q8WTZ3 238 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 TMEM56Q96MV1 263 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 TRIP12Q14669 1992 aaPredicted RBP12.12□□□□□ -0.47
SMC5-201ENST00000361138 CHRNB4P30926 498 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 OR4A47Q6IF82 309 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 MRPL18Q9H0U6 180 aaKnown RBP12.11□□□□□ -0.47
SMC5-201ENST00000361138 LHFPL6Q9Y693 200 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 C5orf52A6NGY3 159 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 GNG10P50151 68 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 EGR4Q05215 589 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 SLC23A3Q6PIS1 610 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 RASL10BQ96S79 203 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 ATG101Q9BSB4 218 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 RBKSQ9H477 322 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 POLR2AP24928 1970 aaKnown RBP12.11□□□□□ -0.47
SMC5-201ENST00000361138 CA11O75493 328 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 TAF15Q92804 592 aaKnown RBP eCLIP12.11□□□□□ -0.47
SMC5-201ENST00000361138 PCM1Q15154 2024 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 LRRC3CA6NJW4 275 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 PGLYRP1O75594 196 aaPredicted RBP12.11□□□□□ -0.47
SMC5-201ENST00000361138 HAND1O96004 215 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 SPINK2P20155 84 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 SLC25A47Q6Q0C1 308 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 GNB4Q9HAV0 340 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 BARX1Q9HBU1 254 aaPredicted RBP12.11□□□□□ -0.47
SMC5-201ENST00000361138 OR1A1Q9P1Q5 309 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 SRP19P09132 144 aaKnown RBP12.11□□□□□ -0.47
SMC5-201ENST00000361138 SCTP09683 121 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 RHBDD2Q6NTF9 364 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 GPR146Q96CH1 333 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 Q96M66 194 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 WFIKKN1Q96NZ8 548 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 UCN2Q96RP3 112 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 MENTQ9BUN1 341 aa12.11□□□□□ -0.47
SMC5-201ENST00000361138 A6NDN8 102 aa12.1□□□□□ -0.47
SMC5-201ENST00000361138 MARS2Q96GW9 593 aaKnown RBP12.1□□□□□ -0.47
SMC5-201ENST00000361138 HSPB8Q9UJY1 196 aa12.1□□□□□ -0.47
SMC5-201ENST00000361138 RNF122Q9H9V4 155 aa12.1□□□□□ -0.47
SMC5-201ENST00000361138 PROCRQ9UNN8 238 aa12.1□□□□□ -0.47
SMC5-201ENST00000361138 MEX3AA1L020 520 aaKnown RBP12.1□□□□□ -0.47
SMC5-201ENST00000361138 DHRS7CA6NNS2 312 aa12.1□□□□□ -0.47
SMC5-201ENST00000361138 NEURL1O76050 574 aa12.1□□□□□ -0.47
SMC5-201ENST00000361138 AGAP20933 346 aa12.1□□□□□ -0.47
SMC5-201ENST00000361138 MESP2Q0VG99 397 aa12.1□□□□□ -0.47
SMC5-201ENST00000361138 HES1Q14469 280 aa12.1□□□□□ -0.47
SMC5-201ENST00000361138 LEMD1Q68G75 181 aa12.1□□□□□ -0.47
SMC5-201ENST00000361138 RAMP1O60894 148 aa12.1□□□□□ -0.47
SMC5-201ENST00000361138 LINC00114Q6XXX2 140 aa12.1□□□□□ -0.47
SMC5-201ENST00000361138 LYG1Q8N1E2 194 aa12.1□□□□□ -0.47
SMC5-201ENST00000361138 OR4S2Q8NH73 311 aa12.1□□□□□ -0.47
SMC5-201ENST00000361138 EGLN1Q9GZT9 426 aa12.1□□□□□ -0.47
SMC5-201ENST00000361138 GPR35Q9HC97 309 aa12.1□□□□□ -0.47
SMC5-201ENST00000361138 COLCA2A8K830 154 aa12.09□□□□□ -0.47
SMC5-201ENST00000361138 CD1BP29016 333 aa12.09□□□□□ -0.47
SMC5-201ENST00000361138 SPNS3Q6ZMD2 512 aa12.09□□□□□ -0.47
SMC5-201ENST00000361138 OR2Z1Q8NG97 314 aa12.09□□□□□ -0.47
SMC5-201ENST00000361138 OR5R1Q8NH85 324 aa12.09□□□□□ -0.47
SMC5-201ENST00000361138 CCL11P51671 97 aa12.09□□□□□ -0.47
SMC5-201ENST00000361138 OR5A2Q8NGI9 324 aa12.09□□□□□ -0.47
SMC5-201ENST00000361138 PARD6GQ9BYG4 376 aaPredicted RBP12.09□□□□□ -0.47
SMC5-201ENST00000361138 ISLRO14498 428 aa12.09□□□□□ -0.47
SMC5-201ENST00000361138 FNDC7Q5VTL7 733 aa12.09□□□□□ -0.47
SMC5-201ENST00000361138 PDPNQ86YL7 162 aa12.09□□□□□ -0.47
SMC5-201ENST00000361138 TMEM251Q8N6I4 163 aa12.09□□□□□ -0.47
SMC5-201ENST00000361138 SH3BGRL2Q9UJC5 107 aa12.09□□□□□ -0.47
SMC5-201ENST00000361138 RNF24Q9Y225 148 aa12.09□□□□□ -0.47
SMC5-201ENST00000361138 IGSF23A1L1A6 192 aa12.09□□□□□ -0.47
SMC5-201ENST00000361138 KBTBD11O94819 623 aa12.09□□□□□ -0.47
SMC5-201ENST00000361138 MT-ND6P03923 174 aa12.09□□□□□ -0.47
SMC5-201ENST00000361138 IGFBP3P17936 291 aaPredicted RBP12.09□□□□□ -0.47
SMC5-201ENST00000361138 UCP3P55916 312 aa12.09□□□□□ -0.47
SMC5-201ENST00000361138 BPIFA4PQ86YQ2 179 aa12.09□□□□□ -0.47
SMC5-201ENST00000361138 MAFAQ8NHW3 353 aaPredicted RBP12.09□□□□□ -0.47
SMC5-201ENST00000361138 MISP3Q96FF7 219 aa12.09□□□□□ -0.47
SMC5-201ENST00000361138 ZNF385AQ96PM9 386 aaKnown RBP12.09□□□□□ -0.47
SMC5-201ENST00000361138 CRISPLD2Q9H0B8 497 aa12.09□□□□□ -0.47
SMC5-201ENST00000361138 CXXC4Q9H2H0 198 aa12.09□□□□□ -0.47
SMC5-201ENST00000361138 GMPPAQ96IJ6 420 aaPredicted RBP12.09□□□□□ -0.47
SMC5-201ENST00000361138 ZNF735P0CB33 412 aa12.08□□□□□ -0.47
SMC5-201ENST00000361138 DMWDQ09019 674 aa12.08□□□□□ -0.47
SMC5-201ENST00000361138 TEPPQ6URK8 271 aa12.08□□□□□ -0.47
SMC5-201ENST00000361138 LRRC75AQ8NAA5 344 aa12.08□□□□□ -0.47
SMC5-201ENST00000361138 AICDAQ9GZX7 198 aa12.08□□□□□ -0.47
SMC5-201ENST00000361138 PARLQ9H300 379 aa12.08□□□□□ -0.47
SMC5-201ENST00000361138 NGBQ9NPG2 151 aa12.08□□□□□ -0.47
SMC5-201ENST00000361138 ZNF207O43670 478 aaKnown RBP12.08□□□□□ -0.48
SMC5-201ENST00000361138 FZR1Q9UM11 496 aa12.08□□□□□ -0.48
SMC5-201ENST00000361138 TRAV39A0A0B4J263 110 aa12.08□□□□□ -0.48
SMC5-201ENST00000361138 K7ERU9 68 aa12.08□□□□□ -0.48
SMC5-201ENST00000361138 SMPD2O60906 423 aa12.08□□□□□ -0.48
SMC5-201ENST00000361138 LCTP09848 1927 aa12.08□□□□□ -0.48
SMC5-201ENST00000361138 KIR2DL1P43626 348 aaPredicted RBP12.08□□□□□ -0.48
SMC5-201ENST00000361138 FGF12P61328 243 aa12.08□□□□□ -0.48
SMC5-201ENST00000361138 RPL24P83731 157 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms