RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 H0Y8X5 98 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 FCGR3AP08637 254 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 HOXC4P09017 264 aaPredicted RBP8.18□□□□□ -1.1
VPS13A-203ENST00000360280 ABHD14BQ96IU4 210 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 WIPI2Q9Y4P8 454 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 A0A0B4J293 547 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 J3QR06 171 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 MRPL18Q9H0U6 180 aaKnown RBP8.18□□□□□ -1.1
VPS13A-203ENST00000360280 NTMQ9P121 344 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 STRCQ7RTU9 1775 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 C17orf51A8MQB3 221 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 DMRTC1Q5HYR2 192 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 PTCRAQ6ISU1 281 aaPredicted RBP8.18□□□□□ -1.1
VPS13A-203ENST00000360280 RHOVQ96L33 236 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 TOX2Q96NM4 488 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 V9GYH0 126 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 FAM157AC9JC47 383 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 TM4SF20Q53R12 229 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 NIT1Q86X76 327 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 ASB5Q8WWX0 329 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 CRISPLD2Q9H0B8 497 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 OR51B2Q9Y5P1 312 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 LILRA5A6NI73 299 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 MOSPD3O75425 235 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 PSG9Q00887 426 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 MRGPRFQ96AM1 343 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 H3BMH7 237 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 NDUFS8O00217 210 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 IGF2P01344 180 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 SOD3P08294 240 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 ZNF32P17041 273 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 SCNM1Q9BWG6 230 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 RNF122Q9H9V4 155 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 RECKO95980 971 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 GZMHP20718 246 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 SELENOTP62341 195 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 CACNG7P62955 275 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 PTP4A1Q93096 173 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 C2orf88Q9BSF0 95 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 GAPDHP04406 335 aaKnown RBP8.18□□□□□ -1.1
VPS13A-203ENST00000360280 OR4A5Q8NH83 315 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 NUDT8Q8WV74 236 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 IGKV3-7A0A075B6H7 116 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 TMSB15BA0A087X1C1 80 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 J3KRW8 73 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 TRGC1P0CF51 173 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 LSM6P62312 80 aaKnown RBP8.18□□□□□ -1.1
VPS13A-203ENST00000360280 RELQ04864 619 aaPredicted RBP8.18□□□□□ -1.1
VPS13A-203ENST00000360280 SLC23A3Q6PIS1 610 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 TMEM45BQ96B21 275 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 AQP10Q96PS8 301 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 DSPPQ9NZW4 1301 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 IL11RAQ14626 422 aa8.18□□□□□ -1.1
VPS13A-203ENST00000360280 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.18□□□□□ -1.1
VPS13A-203ENST00000360280 DEFB109BQ30KR1 87 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 GVQW1Q8N7I0 195 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 GLRX2Q9NS18 164 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 FAM181BA6NEQ2 426 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 TMEM210A6NLX4 147 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 B4GALNT1Q00973 533 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 OR1L8Q8NGR8 309 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 TRAV8-7A0A075B6U6 113 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 TRAV17A0A0B4J275 112 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 RPS4XP62701 263 aaKnown RBP8.17□□□□□ -1.1
VPS13A-203ENST00000360280 KCNE5Q9UJ90 142 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 C19orf67A6NJJ6 358 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 TNFSF15O95150 251 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 PAQR9Q6ZVX9 377 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 LINC00469Q8N7U9 141 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 OR4D5Q8NGN0 318 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 ZBP1Q9H171 429 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 BEX4Q9NWD9 120 aaPredicted RBP8.17□□□□□ -1.1
VPS13A-203ENST00000360280 A0A1W2PS18 150 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 CA11O75493 328 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 C6orf106Q9H6K1 298 aaPredicted RBP8.17□□□□□ -1.1
VPS13A-203ENST00000360280 OR11H12B2RN74 326 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 MT-CO3P00414 261 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 OR11H1Q8NG94 326 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 OR11H2Q8NH07 326 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 ASB10Q8WXI3 467 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 MFRPQ9BY79 579 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 PKIBQ9C010 78 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 ADAMTS5Q9UNA0 930 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 TMEM50BP56557 158 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 TCF23Q7RTU1 214 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 FOXJ2Q9P0K8 574 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 OR8B12Q8NGG6 310 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 F11RQ9Y624 299 aaKnown RBP8.17□□□□□ -1.1
VPS13A-203ENST00000360280 ETHE1O95571 254 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 PCMT1P22061 227 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 TMEM177Q53S58 311 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 DLK2Q6UY11 383 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 PXMP4Q9Y6I8 212 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 C7orf71A4D174 169 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 RHBDD2Q6NTF9 364 aa8.17□□□□□ -1.1
VPS13A-203ENST00000360280 MS4A3Q96HJ5 214 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 KLKB1P03952 638 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 ZNF714Q96N38 554 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 PLPP3O14495 311 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 HKR1P10072 659 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms