RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 A0A1B0GX30 115 aa10.15□□□□□ -0.79
NIF3L1-201ENST00000359683 AVPP01185 164 aa10.15□□□□□ -0.79
NIF3L1-201ENST00000359683 CTXN2P0C2S0 81 aa10.15□□□□□ -0.79
NIF3L1-201ENST00000359683 VAMP1P23763 118 aa10.15□□□□□ -0.79
NIF3L1-201ENST00000359683 CD40LGP29965 261 aa10.15□□□□□ -0.79
NIF3L1-201ENST00000359683 BAK1Q16611 211 aa10.15□□□□□ -0.79
NIF3L1-201ENST00000359683 IGSF11Q5DX21 431 aa10.15□□□□□ -0.79
NIF3L1-201ENST00000359683 VMO1Q7Z5L0 202 aa10.15□□□□□ -0.79
NIF3L1-201ENST00000359683 TMEM229BQ8NBD8 167 aa10.15□□□□□ -0.79
NIF3L1-201ENST00000359683 OR5AP2Q8NGF4 316 aa10.15□□□□□ -0.79
NIF3L1-201ENST00000359683 TRIM63Q969Q1 353 aa10.15□□□□□ -0.79
NIF3L1-201ENST00000359683 UPRTQ96BW1 309 aa10.15□□□□□ -0.79
NIF3L1-201ENST00000359683 TOLLIPQ9H0E2 274 aa10.15□□□□□ -0.79
NIF3L1-201ENST00000359683 GFOD1Q9NXC2 390 aa10.15□□□□□ -0.79
NIF3L1-201ENST00000359683 TRBV6-7A0A0A0MS04 114 aa10.14□□□□□ -0.79
NIF3L1-201ENST00000359683 LY6G6DO95868 133 aa10.14□□□□□ -0.79
NIF3L1-201ENST00000359683 CD34P28906 385 aa10.14□□□□□ -0.79
NIF3L1-201ENST00000359683 LTC4SQ16873 150 aa10.14□□□□□ -0.79
NIF3L1-201ENST00000359683 LY6G6FQ5SQ64 297 aa10.14□□□□□ -0.79
NIF3L1-201ENST00000359683 STEAP3Q658P3 488 aa10.14□□□□□ -0.79
NIF3L1-201ENST00000359683 HCP5Q6MZN7 132 aa10.14□□□□□ -0.79
NIF3L1-201ENST00000359683 FAM53AQ6NSI3 398 aaPredicted RBP10.14□□□□□ -0.79
NIF3L1-201ENST00000359683 OR52L2PQ8NGH6 319 aa10.14□□□□□ -0.79
NIF3L1-201ENST00000359683 IL1F10Q8WWZ1 152 aa10.14□□□□□ -0.79
NIF3L1-201ENST00000359683 PCGF1Q9BSM1 259 aa10.14□□□□□ -0.79
NIF3L1-201ENST00000359683 TMEM133Q9H2Q1 129 aa10.14□□□□□ -0.79
NIF3L1-201ENST00000359683 HEXA-AS1Q9H8Q6 139 aa10.14□□□□□ -0.79
NIF3L1-201ENST00000359683 OR2S2Q9NQN1 319 aa10.14□□□□□ -0.79
NIF3L1-201ENST00000359683 SIRT7Q9NRC8 400 aa10.14□□□□□ -0.79
NIF3L1-201ENST00000359683 TAS2R8Q9NYW2 309 aa10.14□□□□□ -0.79
NIF3L1-201ENST00000359683 JPT1Q9UK76 154 aa10.14□□□□□ -0.79
NIF3L1-201ENST00000359683 KCNS2Q9ULS6 477 aa10.14□□□□□ -0.79
NIF3L1-201ENST00000359683 TLN2Q9Y4G6 2542 aa10.13□□□□□ -0.79
NIF3L1-201ENST00000359683 ANKRD20A5PA0PJZ0 165 aa10.13□□□□□ -0.79
NIF3L1-201ENST00000359683 SDCBPO00560 298 aaPredicted RBP10.13□□□□□ -0.79
NIF3L1-201ENST00000359683 YPEL1O60688 119 aa10.13□□□□□ -0.79
NIF3L1-201ENST00000359683 CD74P04233 296 aa10.13□□□□□ -0.79
NIF3L1-201ENST00000359683 ZBTB25P24278 435 aa10.13□□□□□ -0.79
NIF3L1-201ENST00000359683 NFYBP25208 207 aa10.13□□□□□ -0.79
NIF3L1-201ENST00000359683 HLA-DMAP28067 261 aa10.13□□□□□ -0.79
NIF3L1-201ENST00000359683 DLX1P56177 255 aa10.13□□□□□ -0.79
NIF3L1-201ENST00000359683 TAS2R46P59540 309 aa10.13□□□□□ -0.79
NIF3L1-201ENST00000359683 Q3ZCU0 254 aa10.13□□□□□ -0.79
NIF3L1-201ENST00000359683 CHRFAM7AQ494W8 412 aa10.13□□□□□ -0.79
NIF3L1-201ENST00000359683 MORN2Q502X0 79 aa10.13□□□□□ -0.79
NIF3L1-201ENST00000359683 UTF1Q5T230 341 aa10.13□□□□□ -0.79
NIF3L1-201ENST00000359683 ZNF782Q6ZMW2 699 aaPredicted RBP10.13□□□□□ -0.79
NIF3L1-201ENST00000359683 C1orf229Q6ZS94 237 aaPredicted RBP10.13□□□□□ -0.79
NIF3L1-201ENST00000359683 OVCH2Q7RTZ1 564 aa10.13□□□□□ -0.79
NIF3L1-201ENST00000359683 YPEL2Q96QA6 119 aa10.13□□□□□ -0.79
NIF3L1-201ENST00000359683 TSC22D3Q99576 134 aa10.13□□□□□ -0.79
NIF3L1-201ENST00000359683 CCDC32Q9BV29 185 aa10.13□□□□□ -0.79
NIF3L1-201ENST00000359683 IGHV3-43A0A0B4J1X8 118 aa10.12□□□□□ -0.79
NIF3L1-201ENST00000359683 ZNF736B4DX44 427 aaPredicted RBP10.12□□□□□ -0.79
NIF3L1-201ENST00000359683 RNASEK-C17orf49H0YIS7 233 aa10.12□□□□□ -0.79
NIF3L1-201ENST00000359683 PMP2P02689 132 aa10.12□□□□□ -0.79
NIF3L1-201ENST00000359683 CSF1P09603 554 aa10.12□□□□□ -0.79
NIF3L1-201ENST00000359683 IGHV3-43DP0DP04 118 aa10.12□□□□□ -0.79
NIF3L1-201ENST00000359683 TBPP20226 339 aa10.12□□□□□ -0.79
NIF3L1-201ENST00000359683 CEACAM6P40199 344 aa10.12□□□□□ -0.79
NIF3L1-201ENST00000359683 OR3A3P47888 321 aa10.12□□□□□ -0.79
NIF3L1-201ENST00000359683 TAS2R19P59542 299 aa10.12□□□□□ -0.79
NIF3L1-201ENST00000359683 ARPC4P59998 168 aa10.12□□□□□ -0.79
NIF3L1-201ENST00000359683 TAGLNQ01995 201 aaKnown RBP10.12□□□□□ -0.79
NIF3L1-201ENST00000359683 GNMTQ14749 295 aa10.12□□□□□ -0.79
NIF3L1-201ENST00000359683 CDK10Q15131 360 aa10.12□□□□□ -0.79
NIF3L1-201ENST00000359683 NCR3LG1Q68D85 454 aa10.12□□□□□ -0.79
NIF3L1-201ENST00000359683 ABHD12Q8N2K0 398 aa10.12□□□□□ -0.79
NIF3L1-201ENST00000359683 OR11H6Q8NGC7 330 aa10.12□□□□□ -0.79
NIF3L1-201ENST00000359683 OR10J5Q8NHC4 309 aa10.12□□□□□ -0.79
NIF3L1-201ENST00000359683 SUCNR1Q9BXA5 334 aa10.12□□□□□ -0.79
NIF3L1-201ENST00000359683 NECAP2Q9NVZ3 263 aa10.12□□□□□ -0.79
NIF3L1-201ENST00000359683 OR1A1Q9P1Q5 309 aa10.12□□□□□ -0.79
NIF3L1-201ENST00000359683 GNG12Q9UBI6 72 aa10.12□□□□□ -0.79
NIF3L1-201ENST00000359683 SLC23A1Q9UHI7 598 aa10.12□□□□□ -0.79
NIF3L1-201ENST00000359683 J3QRK9 145 aa10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 BET1O15155 118 aa10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 HSPA12AO43301 675 aa10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 CD3DP04234 171 aa10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 OR5H8P0DN80 308 aa10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 IL7P13232 177 aa10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 HRH1P35367 487 aa10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 RFX2P48378 723 aa10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 PRB3Q04118 309 aaPredicted RBP10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 DYRK1AQ13627 763 aa10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 KLF9Q13886 244 aaPredicted RBP10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 ACTBL2Q562R1 376 aa10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 VAX1Q5SQQ9 334 aa10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 STEAP1BQ6NZ63 245 aa10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 DHRS11Q6UWP2 260 aa10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 H1FOOQ8IZA3 346 aaPredicted RBP10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 PNKDQ8N490 385 aa10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 C8orf31Q8N9H6 132 aa10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 ZNF439Q8NDP4 499 aa10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 OR10V1Q8NGI7 309 aa10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 OR13D1Q8NGV5 346 aa10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 OR5H2Q8NGV7 314 aa10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 ZNF596Q8TC21 504 aa10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 YAE1D1Q9NRH1 226 aa10.11□□□□□ -0.79
NIF3L1-201ENST00000359683 PSG11Q9UQ72 335 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms