RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 CTXN2P0C2S0 81 aa12.22□□□□□ -0.45
SREBF1-202ENST00000355815 HKR1P10072 659 aa12.22□□□□□ -0.45
SREBF1-202ENST00000355815 FAM3AP98173 230 aa12.22□□□□□ -0.45
SREBF1-202ENST00000355815 GAPTQ8N292 157 aa12.22□□□□□ -0.45
SREBF1-202ENST00000355815 OR1P1Q8NH06 330 aa12.22□□□□□ -0.45
SREBF1-202ENST00000355815 FOXJ2Q9P0K8 574 aa12.22□□□□□ -0.45
SREBF1-202ENST00000355815 DIRC3C9JPN6 131 aa12.22□□□□□ -0.45
SREBF1-202ENST00000355815 HIST3H3Q16695 136 aa12.22□□□□□ -0.45
SREBF1-202ENST00000355815 KIAA1644Q3SXP7 199 aa12.22□□□□□ -0.45
SREBF1-202ENST00000355815 OR10V1Q8NGI7 309 aa12.22□□□□□ -0.45
SREBF1-202ENST00000355815 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.22□□□□□ -0.453e-7■■■□□ 18.5
SREBF1-202ENST00000355815 CA6P23280 308 aa12.21□□□□□ -0.45
SREBF1-202ENST00000355815 CNN1P51911 297 aaKnown RBP12.21□□□□□ -0.45
SREBF1-202ENST00000355815 VWA1Q6PCB0 445 aa12.21□□□□□ -0.45
SREBF1-202ENST00000355815 KIAA1456Q9P272 454 aa12.21□□□□□ -0.45
SREBF1-202ENST00000355815 VAX2Q9UIW0 290 aa12.21□□□□□ -0.45
SREBF1-202ENST00000355815 NAGKQ9UJ70 344 aa12.21□□□□□ -0.45
SREBF1-202ENST00000355815 PCDH15Q96QU1 1955 aa12.21□□□□□ -0.45
SREBF1-202ENST00000355815 DOCK11Q5JSL3 2073 aa12.21□□□□□ -0.45
SREBF1-202ENST00000355815 OTX1P32242 354 aaPredicted RBP12.21□□□□□ -0.45
SREBF1-202ENST00000355815 CDC34P49427 236 aaPredicted RBP12.21□□□□□ -0.45
SREBF1-202ENST00000355815 TAS2R60P59551 318 aa12.21□□□□□ -0.45
SREBF1-202ENST00000355815 ZNF260Q3ZCT1 412 aa12.21□□□□□ -0.45
SREBF1-202ENST00000355815 Q5PR19 223 aa12.21□□□□□ -0.45
SREBF1-202ENST00000355815 OR2V1Q8NHB1 315 aa12.21□□□□□ -0.45
SREBF1-202ENST00000355815 C5orf66Q9H5L9 145 aa12.21□□□□□ -0.45
SREBF1-202ENST00000355815 ZNF319Q9P2F9 582 aa12.21□□□□□ -0.45
SREBF1-202ENST00000355815 CACFD1Q9UGQ2 172 aa12.21□□□□□ -0.45
SREBF1-202ENST00000355815 GPR132Q9UNW8 380 aa12.21□□□□□ -0.45
SREBF1-202ENST00000355815 ATXN7O15265 892 aaPredicted RBP12.21□□□□□ -0.46
SREBF1-202ENST00000355815 CD82P27701 267 aa12.21□□□□□ -0.46
SREBF1-202ENST00000355815 UNC119Q13432 240 aa12.21□□□□□ -0.46
SREBF1-202ENST00000355815 GPR27Q9NS67 375 aa12.21□□□□□ -0.46
SREBF1-202ENST00000355815 PLXNA2O75051 1894 aa12.21□□□□□ -0.46
SREBF1-202ENST00000355815 M0QZK8 103 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 GGCTO75223 188 aaKnown RBP12.2□□□□□ -0.46
SREBF1-202ENST00000355815 FOXO1Q12778 655 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 FNDC7Q5VTL7 733 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 TMEM252Q8N6L7 170 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 OR10G8Q8NGN5 311 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 OR2Y1Q8NGV0 311 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 SSMEM1Q8WWF3 244 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 DBX1A6NMT0 343 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 DHRS7CA6NNS2 312 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 EFNA2O43921 213 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 RAC1P63000 192 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 SPNS3Q6ZMD2 512 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 MRGPRFQ96AM1 343 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 FAM122AQ96E09 287 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 REG4Q9BYZ8 158 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 TWSG1Q9GZX9 223 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 LIN7CQ9NUP9 197 aaKnown RBP12.2□□□□□ -0.46
SREBF1-202ENST00000355815 FAM206AQ9NX38 181 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 COLQQ9Y215 455 aaPredicted RBP12.2□□□□□ -0.46
SREBF1-202ENST00000355815 HS3ST3B1Q9Y662 390 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 SELENOKQ9Y6D0 94 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 DNAH14Q0VDD8 3507 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 SYNGR2O43760 224 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 SNAI3Q3KNW1 292 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 LHFPL2Q6ZUX7 228 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 TIMM8AO60220 97 aaPredicted RBP12.2□□□□□ -0.46
SREBF1-202ENST00000355815 TNFSF15O95150 251 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 PPYP01298 95 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 HLA-DRB5Q30154 266 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 ACY3Q96HD9 319 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 HES7Q9BYE0 225 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 SLC2A8Q9NY64 477 aa12.2□□□□□ -0.46
SREBF1-202ENST00000355815 CHD9Q3L8U1 2897 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 PRR14LQ5THK1 2151 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 THBS4P35443 961 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 IL11RAQ14626 422 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 TEX30Q5JUR7 227 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 RAB40CQ96S21 281 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 ZNF835Q9Y2P0 537 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 CARHSP1Q9Y2V2 147 aaKnown RBP12.19□□□□□ -0.46
SREBF1-202ENST00000355815 IGHV3-43A0A0B4J1X8 118 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 C5orf63A6NC05 138 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 PDCD6O75340 191 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 IGHV3-43DP0DP04 118 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 STUMQ69YW2 141 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 HOGA1Q86XE5 327 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 OR6C3Q9NZP0 311 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 FZR1Q9UM11 496 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 VDAC1P21796 283 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 CDCP2Q5VXM1 449 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 TRAT1Q6PIZ9 186 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 OR52M1Q8NGK5 317 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 OR4A4PQ8NGN8 299 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 ZNF488Q96MN9 340 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 PCED1AQ9H1Q7 454 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 OPN3Q9H1Y3 402 aaPredicted RBP12.19□□□□□ -0.46
SREBF1-202ENST00000355815 SLC7A10Q9NS82 523 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 OR1A1Q9P1Q5 309 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 TCFL5Q9UL49 500 aa12.19□□□□□ -0.46
SREBF1-202ENST00000355815 THADAQ6YHU6 1953 aa12.18□□□□□ -0.46
SREBF1-202ENST00000355815 M0R2Z0 102 aa12.18□□□□□ -0.46
SREBF1-202ENST00000355815 CLPSP04118 112 aa12.18□□□□□ -0.46
SREBF1-202ENST00000355815 CD1AP06126 327 aa12.18□□□□□ -0.46
SREBF1-202ENST00000355815 SFTPCP11686 197 aa12.18□□□□□ -0.46
SREBF1-202ENST00000355815 SUCLG1P53597 346 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms