RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 CA10Q9NS85 328 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 MTCH1Q9NZJ7 389 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 ANXA10Q9UJ72 324 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 NPTNQ9Y639 398 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 NOTCH1P46531 2555 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 YLPM1P49750 1951 aaKnown RBP5.78□□□□□ -1.48
VPS13A-201ENST00000355766 VWFP04275 2813 aa5.78□□□□□ -1.48
VPS13A-201ENST00000355766 HEATR1Q9H583 2144 aaKnown RBP5.77□□□□□ -1.49
VPS13A-201ENST00000355766 MCRIP1C9JLW8 97 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 ATP6V1G2-DDX39BF2Z307 99 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 MLNRO43193 412 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 CREBL2O60519 120 aaPredicted RBP5.77□□□□□ -1.49
VPS13A-201ENST00000355766 FSTL3O95633 263 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 LY86O95711 162 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 HNRNPCP07910 306 aaKnown RBP eCLIP5.77□□□□□ -1.49
VPS13A-201ENST00000355766 FCGR3AP08637 254 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 ZNF735P0CB33 412 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 BCL3P20749 454 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 HRH1P35367 487 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 SNU13P55769 128 aaKnown RBP5.77□□□□□ -1.49
VPS13A-201ENST00000355766 ERVS71-1P61550 626 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 MADCAM1Q13477 382 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 MPPED2Q15777 294 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 PIGYQ3MUY2 71 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 ZNF626Q68DY1 528 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 C11orf88Q6PI97 169 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 C6orf201Q7Z4U5 140 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 WDR86Q86TI4 376 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 LHFPL1Q86WI0 220 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 BPIFB2Q8N4F0 458 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 SPICQ8N5J4 248 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 SCCPDHQ8NBX0 429 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 OR51S1Q8NGJ8 323 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 OR10K1Q8NGX5 313 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 OR6F1Q8NGZ6 308 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 TERB2Q8NHR7 220 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 GIMAP1Q8WWP7 306 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 SLAMF9Q96A28 289 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 ZNF486Q96H40 463 aaPredicted RBP5.77□□□□□ -1.49
VPS13A-201ENST00000355766 NKX3-1Q99801 234 aaPredicted RBP5.77□□□□□ -1.49
VPS13A-201ENST00000355766 OR51J1Q9H342 316 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 ZMAT3Q9HA38 289 aaKnown RBP5.77□□□□□ -1.49
VPS13A-201ENST00000355766 FN3KRPQ9HA64 309 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 NECAP2Q9NVZ3 263 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 IL19Q9UHD0 177 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 OPN4Q9UHM6 478 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 ALG5Q9Y673 324 aa5.77□□□□□ -1.49
VPS13A-201ENST00000355766 A0A0B4J2A0 478 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 SRRM5B3KS81 715 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 SH2D1BO14796 132 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 DEGS1O15121 323 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 SYNGR1O43759 233 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 B3GALNT1O75752 331 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 CCNKO75909 580 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 RGS11O94810 467 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 NXPH2O95156 264 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 SULT1A3P0DMM9 295 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 SULT1A4P0DMN0 295 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 PTHLHP12272 177 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 ANXA3P12429 323 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 GYPEP15421 78 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 PRKACAP17612 351 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 APOBEC3AP31941 199 aaPredicted RBP5.76□□□□□ -1.49
VPS13A-201ENST00000355766 OR3A3P47888 321 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 NPBWR2P48146 333 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 CCR6P51684 374 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 UCP3P55916 312 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 ARPC4P59998 168 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 SNRPD2P62316 118 aaKnown RBP5.76□□□□□ -1.49
VPS13A-201ENST00000355766 MAB21L1Q13394 359 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 MICBQ29980 383 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 MST1LQ2TV78 715 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 TMEM30BQ3MIR4 351 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 RNASE12Q5GAN4 147 aaKnown RBP5.76□□□□□ -1.49
VPS13A-201ENST00000355766 TMEM255AQ5JRV8 349 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 ZNF880Q6PDB4 577 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 TRAT1Q6PIZ9 186 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 DHRS11Q6UWP2 260 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 WDR82Q6UXN9 313 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 Q6ZR03 302 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 GLCCI1Q86VQ1 547 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 FAM185AQ8N0U4 392 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 BEND2Q8NDZ0 799 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 TMEM185AQ8NFB2 350 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 OR4D10Q8NGI6 311 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 PPP1R35Q8TAP8 253 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 ZFAND1Q8TCF1 268 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 ELMOD3Q96FG2 381 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 VRK1Q99986 396 aaPredicted RBP5.76□□□□□ -1.49
VPS13A-201ENST00000355766 SULT4A1Q9BR01 284 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 DPCDQ9BVM2 203 aaPredicted RBP5.76□□□□□ -1.49
VPS13A-201ENST00000355766 TINAGL1Q9GZM7 467 aaPredicted RBP5.76□□□□□ -1.49
VPS13A-201ENST00000355766 DNTTIP1Q9H147 329 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 MED28Q9H204 178 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 PPA2Q9H2U2 334 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 OR51B6Q9H340 312 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 RAB9BQ9NP90 201 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 MYEF2Q9P2K5 600 aaKnown RBP5.76□□□□□ -1.49
VPS13A-201ENST00000355766 SHPKQ9UHJ6 478 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 AK3Q9UIJ7 227 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms