RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 FAM90A23PA8MXZ1 464 aa13.2□□□□□ -0.3
PDLIM7-201ENST00000355572 GAPDHP04406 335 aaKnown RBP13.2□□□□□ -0.3
PDLIM7-201ENST00000355572 IGLL1P15814 213 aa13.2□□□□□ -0.3
PDLIM7-201ENST00000355572 SRMP19623 302 aa13.2□□□□□ -0.3
PDLIM7-201ENST00000355572 CRHBPP24387 322 aa13.2□□□□□ -0.3
PDLIM7-201ENST00000355572 MAPK3P27361 379 aaPredicted RBP13.2□□□□□ -0.3
PDLIM7-201ENST00000355572 PPP1CCP36873 323 aaKnown RBP13.2□□□□□ -0.3
PDLIM7-201ENST00000355572 ZNF137PP52743 207 aa13.2□□□□□ -0.3
PDLIM7-201ENST00000355572 RPS27AP62979 156 aaKnown RBP13.2□□□□□ -0.3
PDLIM7-201ENST00000355572 IZUMO1Q8IYV9 350 aa13.2□□□□□ -0.3
PDLIM7-201ENST00000355572 PHF21AQ96BD5 680 aa13.2□□□□□ -0.3
PDLIM7-201ENST00000355572 HDHD3Q9BSH5 251 aaPredicted RBP13.2□□□□□ -0.3
PDLIM7-201ENST00000355572 PARP12Q9H0J9 701 aaKnown RBP13.2□□□□□ -0.3
PDLIM7-201ENST00000355572 SPACA1Q9HBV2 294 aa13.2□□□□□ -0.3
PDLIM7-201ENST00000355572 PCDHB16Q9NRJ7 776 aa13.2□□□□□ -0.3
PDLIM7-201ENST00000355572 LRRC42Q9Y546 428 aa13.2□□□□□ -0.3
PDLIM7-201ENST00000355572 SHISA3A0PJX4 238 aa13.19□□□□□ -0.3
PDLIM7-201ENST00000355572 SLC22A1O15245 554 aa13.19□□□□□ -0.3
PDLIM7-201ENST00000355572 IGHG2P01859 326 aa13.19□□□□□ -0.3
PDLIM7-201ENST00000355572 F2RL1P55085 397 aa13.19□□□□□ -0.3
PDLIM7-201ENST00000355572 TPBGQ13641 420 aa13.19□□□□□ -0.3
PDLIM7-201ENST00000355572 MORN2Q502X0 79 aa13.19□□□□□ -0.3
PDLIM7-201ENST00000355572 HSD17B12Q53GQ0 312 aa13.19□□□□□ -0.3
PDLIM7-201ENST00000355572 LCNL1Q6ZST4 164 aa13.19□□□□□ -0.3
PDLIM7-201ENST00000355572 MS4A15Q8N5U1 240 aa13.19□□□□□ -0.3
PDLIM7-201ENST00000355572 OR4F17Q8NGA8 305 aa13.19□□□□□ -0.3
PDLIM7-201ENST00000355572 PHYHIPQ92561 330 aa13.19□□□□□ -0.3
PDLIM7-201ENST00000355572 RITA1Q96K30 269 aa13.19□□□□□ -0.3
PDLIM7-201ENST00000355572 OR4F4Q96R69 305 aa13.19□□□□□ -0.3
PDLIM7-201ENST00000355572 HSPB9Q9BQS6 159 aa13.19□□□□□ -0.3
PDLIM7-201ENST00000355572 TM2D1Q9BX74 207 aa13.19□□□□□ -0.3
PDLIM7-201ENST00000355572 SCN3BQ9NY72 215 aa13.19□□□□□ -0.3
PDLIM7-201ENST00000355572 GNG12Q9UBI6 72 aa13.19□□□□□ -0.3
PDLIM7-201ENST00000355572 AK6Q9Y3D8 172 aaKnown RBP13.19□□□□□ -0.3
PDLIM7-201ENST00000355572 TSSC4Q9Y5U2 329 aaPredicted RBP13.19□□□□□ -0.3
PDLIM7-201ENST00000355572 PSMB11A5LHX3 300 aa13.18□□□□□ -0.3
PDLIM7-201ENST00000355572 FOXI3A8MTJ6 420 aaPredicted RBP13.18□□□□□ -0.3
PDLIM7-201ENST00000355572 M0QZK8 103 aa13.18□□□□□ -0.3
PDLIM7-201ENST00000355572 FGF16O43320 207 aa13.18□□□□□ -0.3
PDLIM7-201ENST00000355572 RGS10O43665 173 aa13.18□□□□□ -0.3
PDLIM7-201ENST00000355572 HSMCR30P0CW71 290 aa13.18□□□□□ -0.3
PDLIM7-201ENST00000355572 SNRPBP14678 240 aaKnown RBP13.18□□□□□ -0.3
PDLIM7-201ENST00000355572 CLDN12P56749 244 aa13.18□□□□□ -0.3
PDLIM7-201ENST00000355572 FABP5Q01469 135 aa13.18□□□□□ -0.3
PDLIM7-201ENST00000355572 P2RY14Q15391 338 aa13.18□□□□□ -0.3
PDLIM7-201ENST00000355572 SSX1Q16384 188 aa13.18□□□□□ -0.3
PDLIM7-201ENST00000355572 C6orf183Q5T699 404 aa13.18□□□□□ -0.3
PDLIM7-201ENST00000355572 IZUMO2Q6UXV1 221 aa13.18□□□□□ -0.3
PDLIM7-201ENST00000355572 WFDC9Q8NEX5 89 aa13.18□□□□□ -0.3
PDLIM7-201ENST00000355572 TMEM59Q9BXS4 323 aa13.18□□□□□ -0.3
PDLIM7-201ENST00000355572 LPAR5Q9H1C0 372 aa13.18□□□□□ -0.3
PDLIM7-201ENST00000355572 SOCS1O15524 211 aa13.17□□□□□ -0.3
PDLIM7-201ENST00000355572 SPINT2O43291 252 aa13.17□□□□□ -0.3
PDLIM7-201ENST00000355572 GLAP06280 429 aa13.17□□□□□ -0.3
PDLIM7-201ENST00000355572 CNTFRP26992 372 aa13.17□□□□□ -0.3
PDLIM7-201ENST00000355572 HMGN3Q15651 99 aa13.17□□□□□ -0.3
PDLIM7-201ENST00000355572 Q3ZCU0 254 aa13.17□□□□□ -0.3
PDLIM7-201ENST00000355572 KHDC1LQ5JSQ8 128 aa13.17□□□□□ -0.3
PDLIM7-201ENST00000355572 FOXB2Q5VYV0 432 aa13.17□□□□□ -0.3
PDLIM7-201ENST00000355572 GLT8D1Q68CQ7 371 aa13.17□□□□□ -0.3
PDLIM7-201ENST00000355572 SVOPQ8N4V2 548 aa13.17□□□□□ -0.3
PDLIM7-201ENST00000355572 UFD1Q92890 307 aa13.17□□□□□ -0.3
PDLIM7-201ENST00000355572 OR2S2Q9NQN1 319 aa13.17□□□□□ -0.3
PDLIM7-201ENST00000355572 AURKAIP1Q9NWT8 199 aaPredicted RBP13.17□□□□□ -0.3
PDLIM7-201ENST00000355572 GHRLQ9UBU3 117 aa13.17□□□□□ -0.3
PDLIM7-201ENST00000355572 TPRKBQ9Y3C4 175 aa13.17□□□□□ -0.3
PDLIM7-201ENST00000355572 NAPSAO96009 420 aa13.16□□□□□ -0.3
PDLIM7-201ENST00000355572 CPEP16870 476 aa13.16□□□□□ -0.3
PDLIM7-201ENST00000355572 CD1BP29016 333 aa13.16□□□□□ -0.3
PDLIM7-201ENST00000355572 GPR12P47775 334 aa13.16□□□□□ -0.3
PDLIM7-201ENST00000355572 OR3A3P47888 321 aa13.16□□□□□ -0.3
PDLIM7-201ENST00000355572 HSPA13P48723 471 aa13.16□□□□□ -0.3
PDLIM7-201ENST00000355572 LSAMPQ13449 338 aa13.16□□□□□ -0.3
PDLIM7-201ENST00000355572 ZNF880Q6PDB4 577 aa13.16□□□□□ -0.3
PDLIM7-201ENST00000355572 SLC35E3Q7Z769 313 aa13.16□□□□□ -0.3
PDLIM7-201ENST00000355572 STPG2Q8N412 459 aa13.16□□□□□ -0.3
PDLIM7-201ENST00000355572 FAM71E2Q8N5Q1 922 aa13.16□□□□□ -0.3
PDLIM7-201ENST00000355572 OR4X2Q8NGF9 303 aa13.16□□□□□ -0.3
PDLIM7-201ENST00000355572 THRSPQ92748 146 aa13.16□□□□□ -0.3
PDLIM7-201ENST00000355572 CNBD2Q96M20 576 aa13.16□□□□□ -0.3
PDLIM7-201ENST00000355572 DUX3Q96PT4 197 aa13.16□□□□□ -0.3
PDLIM7-201ENST00000355572 MRPL20Q9BYC9 149 aaKnown RBP13.16□□□□□ -0.3
PDLIM7-201ENST00000355572 CCDC90BQ9GZT6 254 aa13.16□□□□□ -0.3
PDLIM7-201ENST00000355572 CST11Q9H112 138 aa13.16□□□□□ -0.3
PDLIM7-201ENST00000355572 ABCG5Q9H222 651 aa13.16□□□□□ -0.3
PDLIM7-201ENST00000355572 NCBP2LA6PVI3 153 aaKnown RBP13.15□□□□□ -0.3
PDLIM7-201ENST00000355572 SERPINE3A8MV23 424 aa13.15□□□□□ -0.3
PDLIM7-201ENST00000355572 H3BUI4 141 aa13.15□□□□□ -0.3
PDLIM7-201ENST00000355572 CA11O75493 328 aa13.15□□□□□ -0.3
PDLIM7-201ENST00000355572 PF4V1P10720 104 aa13.15□□□□□ -0.3
PDLIM7-201ENST00000355572 TMEM50BP56557 158 aa13.15□□□□□ -0.3
PDLIM7-201ENST00000355572 KRTAP10-11P60412 298 aa13.15□□□□□ -0.3
PDLIM7-201ENST00000355572 MLLT11Q13015 90 aaPredicted RBP13.15□□□□□ -0.3
PDLIM7-201ENST00000355572 C8orf86Q6ZUL3 223 aa13.15□□□□□ -0.3
PDLIM7-201ENST00000355572 PRSS48Q7RTY5 328 aa13.15□□□□□ -0.3
PDLIM7-201ENST00000355572 TGIF2LXQ8IUE1 241 aa13.15□□□□□ -0.3
PDLIM7-201ENST00000355572 LINC00482Q8N8I6 264 aa13.15□□□□□ -0.3
PDLIM7-201ENST00000355572 OR2T10Q8NGZ9 312 aa13.15□□□□□ -0.3
PDLIM7-201ENST00000355572 S1PR3Q99500 378 aa13.15□□□□□ -0.3
PDLIM7-201ENST00000355572 MGLLQ99685 303 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms