RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 MOGAT3Q86VF5 341 aa11.84□□□□□ -0.51
CDK5RAP1-202ENST00000346416 TPRX1Q8N7U7 411 aa11.84□□□□□ -0.51
CDK5RAP1-202ENST00000346416 BOLLQ8N9W6 283 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP1-202ENST00000346416 OR8U1Q8NH10 309 aa11.84□□□□□ -0.51
CDK5RAP1-202ENST00000346416 PLEKHA2Q9HB19 425 aa11.84□□□□□ -0.51
CDK5RAP1-202ENST00000346416 JKAMPQ9P055 326 aa11.84□□□□□ -0.51
CDK5RAP1-202ENST00000346416 DUXBA0A1W2PPF3 345 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 A8MXK9 166 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 TAAR5O14804 337 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 ROS1P08922 2347 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 VDAC1P21796 283 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 GLIPR1P48060 266 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 RBPJQ06330 500 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 WFDC8Q8IUA0 241 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 EIF4E3Q8N5X7 224 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 MRGPRDQ8TDS7 321 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 ITLN1Q8WWA0 313 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 SPIN2AQ99865 258 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 SPIN2BQ9BPZ2 258 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 PPP1R3CQ9UQK1 317 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 IGKV1D-17A0A075B6S4 117 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 ADAM20O43506 726 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 HBZP02008 142 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 IL2RGP31785 369 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 TMEM33P57088 247 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 NMSQ5H8A3 153 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 RPL7L1Q6DKI1 246 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 TMED6Q8WW62 240 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 IL22RA2Q969J5 263 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 AKR1E2Q96JD6 320 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 KCNS2Q9ULS6 477 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 POMT1Q9Y6A1 747 aa11.83□□□□□ -0.52
CDK5RAP1-202ENST00000346416 SMG1Q96Q15 3661 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP1-202ENST00000346416 ZNF737O75373 536 aa11.82□□□□□ -0.52
CDK5RAP1-202ENST00000346416 SERPINE2P07093 398 aa11.82□□□□□ -0.52
CDK5RAP1-202ENST00000346416 FGF2P09038 288 aa11.82□□□□□ -0.52
CDK5RAP1-202ENST00000346416 PTAFRP25105 342 aa11.82□□□□□ -0.52
CDK5RAP1-202ENST00000346416 FAM90A1Q86YD7 464 aa11.82□□□□□ -0.52
CDK5RAP1-202ENST00000346416 NUP37Q8NFH4 326 aa11.82□□□□□ -0.52
CDK5RAP1-202ENST00000346416 DMBX1Q8NFW5 382 aa11.82□□□□□ -0.52
CDK5RAP1-202ENST00000346416 BARX1Q9HBU1 254 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP1-202ENST00000346416 FBXL17Q9UF56 701 aa11.82□□□□□ -0.52
CDK5RAP1-202ENST00000346416 RCL1Q9Y2P8 373 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP1-202ENST00000346416 IGHV3OR15-7A0A075B7D8 119 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 CLEC18AA5D8T8 446 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 ABCD4O14678 606 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 THBDP07204 575 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 NKX2-1P43699 371 aaPredicted RBP11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 FAM53AQ6NSI3 398 aaPredicted RBP11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 CLEC18CQ8NCF0 446 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 OR52L2PQ8NGH6 319 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 OR13A1Q8NGR1 328 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 ZDHHC8Q9ULC8 765 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 POLEQ07864 2286 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 MEX3AA1L020 520 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 DPRXA6NFQ7 191 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 KALRNO60229 2985 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 LHBP01229 141 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 IGHV1-46P01743 117 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 WNT2P09544 360 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 SSTR5P35346 364 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 GATA4P43694 442 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 P2RY1P47900 373 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 PAX5Q02548 391 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 EDDM3AQ14507 147 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 GNMTQ14749 295 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 CLEC9AQ6UXN8 241 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 DRAM1Q8N682 238 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 RND1Q92730 232 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 ERGIC1Q969X5 290 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 SMIM3Q9BZL3 60 aa11.81□□□□□ -0.52
CDK5RAP1-202ENST00000346416 TNFAIP6P98066 277 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 BSPH1Q075Z2 132 aa11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 CXorf66Q5JRM2 361 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 GPR157Q5UAW9 335 aa11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 NINJ1Q92982 152 aa11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 LURAP1Q96LR2 239 aa11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 LINC00052Q96N35 136 aa11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 IL19Q9UHD0 177 aa11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 CHD8Q9HCK8 2581 aa11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 FGF16O43320 207 aa11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 GPR137BO60478 399 aa11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 SCO1O75880 301 aa11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 ZNF16P17020 682 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 POLR2GP62487 172 aaKnown RBP eCLIP11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 EIF5AP63241 154 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 RFESDQ8TAC1 157 aa11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 RNF141Q8WVD5 230 aa11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 ARL11Q969Q4 196 aa11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 BSCL2Q96G97 398 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 VKORC1Q9BQB6 163 aa11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 DCTN5Q9BTE1 182 aa11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 SEBOXQ9HB31 216 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 GCM1Q9NP62 436 aa11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 RNF150Q9ULK6 438 aa11.8□□□□□ -0.52
CDK5RAP1-202ENST00000346416 USF3Q68DE3 2245 aa11.79□□□□□ -0.52
CDK5RAP1-202ENST00000346416 PIGBOS1A0A0B4J2F0 54 aa11.79□□□□□ -0.52
CDK5RAP1-202ENST00000346416 A0A0G2JRQ6 117 aa11.79□□□□□ -0.52
CDK5RAP1-202ENST00000346416 JTBO76095 146 aa11.79□□□□□ -0.52
CDK5RAP1-202ENST00000346416 GAPDHP04406 335 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms