RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 HLA-DRB5Q30154 266 aa12.84□□□□□ -0.35
RRP1B-201ENST00000340648 OR2Y1Q8NGV0 311 aa12.84□□□□□ -0.35
RRP1B-201ENST00000340648 GPR146Q96CH1 333 aa12.84□□□□□ -0.35
RRP1B-201ENST00000340648 GINS3Q9BRX5 216 aa12.84□□□□□ -0.35
RRP1B-201ENST00000340648 PROCRQ9UNN8 238 aa12.84□□□□□ -0.35
RRP1B-201ENST00000340648 WDR90Q96KV7 1748 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 TRGV5A0A0B4J1U4 118 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 PDE6DO43924 150 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 TMEM11P17152 192 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 CAMPP49913 170 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 SH2D2AQ9NP31 389 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 TRGV10A0A0A0MS01 117 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 DBX1A6NMT0 343 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 F8VVB4 439 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 F8VWA3 439 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 J3QT63 122 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 TOX4O94842 621 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 HAND1O96004 215 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 SUCLG1P53597 346 aaKnown RBP12.83□□□□□ -0.36
RRP1B-201ENST00000340648 PTTG1IPP53801 180 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 FAM162BQ5T6X4 162 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 OR4P4Q8NGL7 312 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 HSD17B10Q99714 261 aaKnown RBP12.83□□□□□ -0.36
RRP1B-201ENST00000340648 ELOVL1Q9BW60 279 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 TDRD6O60522 2096 aaKnown RBP12.83□□□□□ -0.36
RRP1B-201ENST00000340648 IGHV5-10-1A0A0J9YXX1 117 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 IGSF23A1L1A6 192 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 ZNF891A8MT65 544 aaPredicted RBP12.83□□□□□ -0.36
RRP1B-201ENST00000340648 SNURFLB1AK76 121 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 RAMP1O60894 148 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 ASPHD2Q6ICH7 369 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 LRRC29Q8WV35 223 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 PGLYRP1O75594 196 aaPredicted RBP12.83□□□□□ -0.36
RRP1B-201ENST00000340648 MRPL54Q6P161 138 aaKnown RBP12.83□□□□□ -0.36
RRP1B-201ENST00000340648 WDR73Q6P4I2 378 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 WFIKKN1Q96NZ8 548 aa12.83□□□□□ -0.36
RRP1B-201ENST00000340648 KNTC1P50748 2209 aa12.82□□□□□ -0.36
RRP1B-201ENST00000340648 CT45A10P0DMU9 189 aa12.82□□□□□ -0.36
RRP1B-201ENST00000340648 FGF12P61328 243 aa12.82□□□□□ -0.36
RRP1B-201ENST00000340648 HIKESHIQ53FT3 197 aa12.82□□□□□ -0.36
RRP1B-201ENST00000340648 ZNF596Q8TC21 504 aa12.82□□□□□ -0.36
RRP1B-201ENST00000340648 TREM2Q9NZC2 230 aa12.82□□□□□ -0.36
RRP1B-201ENST00000340648 MEOX1P50221 254 aa12.82□□□□□ -0.36
RRP1B-201ENST00000340648 ZNF818PQ6ZRF7 136 aa12.82□□□□□ -0.36
RRP1B-201ENST00000340648 TMEM230Q96A57 120 aa12.82□□□□□ -0.36
RRP1B-201ENST00000340648 RSPO3Q9BXY4 272 aaPredicted RBP12.82□□□□□ -0.36
RRP1B-201ENST00000340648 TINAGQ9UJW2 476 aa12.82□□□□□ -0.36
RRP1B-201ENST00000340648 PMS2P1A4D2B8 440 aa12.82□□□□□ -0.36
RRP1B-201ENST00000340648 M0QZK8 103 aa12.82□□□□□ -0.36
RRP1B-201ENST00000340648 GGCTO75223 188 aaKnown RBP12.82□□□□□ -0.36
RRP1B-201ENST00000340648 WNT16Q9UBV4 365 aa12.82□□□□□ -0.36
RRP1B-201ENST00000340648 MPLP40238 635 aa12.82□□□□□ -0.36
RRP1B-201ENST00000340648 OR5I1Q13606 314 aa12.82□□□□□ -0.36
RRP1B-201ENST00000340648 PSG5Q15238 335 aa12.82□□□□□ -0.36
RRP1B-201ENST00000340648 FGF11Q92914 225 aa12.82□□□□□ -0.36
RRP1B-201ENST00000340648 OR4C12Q96R67 309 aa12.82□□□□□ -0.36
RRP1B-201ENST00000340648 RNF122Q9H9V4 155 aa12.82□□□□□ -0.36
RRP1B-201ENST00000340648 CASP6P55212 293 aa12.81□□□□□ -0.36
RRP1B-201ENST00000340648 RPS23P62266 143 aaKnown RBP12.81□□□□□ -0.36
RRP1B-201ENST00000340648 RBKSQ9H477 322 aa12.81□□□□□ -0.36
RRP1B-201ENST00000340648 LOC102723971A0A1B0GUV8 181 aa12.81□□□□□ -0.36
RRP1B-201ENST00000340648 NDUFB4O95168 129 aa12.81□□□□□ -0.36
RRP1B-201ENST00000340648 NPBWR2P48146 333 aa12.81□□□□□ -0.36
RRP1B-201ENST00000340648 PAX5Q02548 391 aa12.81□□□□□ -0.36
RRP1B-201ENST00000340648 SLC23A3Q6PIS1 610 aa12.81□□□□□ -0.36
RRP1B-201ENST00000340648 SMIM15Q7Z3B0 74 aa12.81□□□□□ -0.36
RRP1B-201ENST00000340648 TDHQ8IZJ6 230 aa12.81□□□□□ -0.36
RRP1B-201ENST00000340648 LINC00469Q8N7U9 141 aa12.81□□□□□ -0.36
RRP1B-201ENST00000340648 CPEB3Q8NE35 698 aaKnown RBP12.81□□□□□ -0.36
RRP1B-201ENST00000340648 OR5D13Q8NGL4 314 aa12.81□□□□□ -0.36
RRP1B-201ENST00000340648 MTCL1Q9Y4B5 1905 aaKnown RBP12.81□□□□□ -0.36
RRP1B-201ENST00000340648 OOEPA6NGQ2 149 aa12.81□□□□□ -0.36
RRP1B-201ENST00000340648 TAF15Q92804 592 aaKnown RBP eCLIP12.81□□□□□ -0.36
RRP1B-201ENST00000340648 STARD4Q96DR4 205 aa12.81□□□□□ -0.36
RRP1B-201ENST00000340648 CISD1Q9NZ45 108 aaKnown RBP12.81□□□□□ -0.36
RRP1B-201ENST00000340648 AUP1Q9Y679 476 aa12.81□□□□□ -0.36
RRP1B-201ENST00000340648 TSC2P49815 1807 aa12.81□□□□□ -0.36
RRP1B-201ENST00000340648 CA11O75493 328 aa12.81□□□□□ -0.36
RRP1B-201ENST00000340648 ETFRF1Q6IPR1 90 aa12.81□□□□□ -0.36
RRP1B-201ENST00000340648 PAQR4Q8N4S7 273 aaPredicted RBP12.81□□□□□ -0.36
RRP1B-201ENST00000340648 ABHD14BQ96IU4 210 aa12.81□□□□□ -0.36
RRP1B-201ENST00000340648 OR1A1Q9P1Q5 309 aa12.81□□□□□ -0.36
RRP1B-201ENST00000340648 ATP23Q9Y6H3 246 aa12.81□□□□□ -0.36
RRP1B-201ENST00000340648 HES1Q14469 280 aa12.8□□□□□ -0.36
RRP1B-201ENST00000340648 ARSJQ5FYB0 599 aaPredicted RBP12.8□□□□□ -0.36
RRP1B-201ENST00000340648 FLVCR1-AS1Q8TAF5 88 aa12.8□□□□□ -0.36
RRP1B-201ENST00000340648 SARAFQ96BY9 339 aa12.8□□□□□ -0.36
RRP1B-201ENST00000340648 RTN4RQ9BZR6 473 aa12.8□□□□□ -0.36
RRP1B-201ENST00000340648 SYNGR1O43759 233 aa12.8□□□□□ -0.36
RRP1B-201ENST00000340648 GCGP01275 180 aa12.8□□□□□ -0.36
RRP1B-201ENST00000340648 MAGEA5P43359 124 aa12.8□□□□□ -0.36
RRP1B-201ENST00000340648 TRA2AQ13595 282 aaKnown RBP eCLIP12.8□□□□□ -0.365e-8■■□□□ 11.4
RRP1B-201ENST00000340648 STUMQ69YW2 141 aa12.8□□□□□ -0.36
RRP1B-201ENST00000340648 HES4Q9HCC6 221 aa12.8□□□□□ -0.36
RRP1B-201ENST00000340648 NAGKQ9UJ70 344 aa12.8□□□□□ -0.36
RRP1B-201ENST00000340648 SLC31A2O15432 143 aa12.8□□□□□ -0.36
RRP1B-201ENST00000340648 OPRK1P41145 380 aa12.8□□□□□ -0.36
RRP1B-201ENST00000340648 AESQ08117 197 aa12.8□□□□□ -0.36
RRP1B-201ENST00000340648 CEACAM21Q3KPI0 293 aa12.8□□□□□ -0.36
RRP1B-201ENST00000340648 STPG1Q5TH74 334 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms