RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 WDR82Q6UXN9 313 aa19.46■□□□□ 0.71
CLPTM1-201ENST00000337392 LRRC46Q96FV0 321 aa19.46■□□□□ 0.71
CLPTM1-201ENST00000337392 LRFN3Q9BTN0 628 aa19.46■□□□□ 0.71
CLPTM1-201ENST00000337392 NSG2Q9Y328 171 aa19.46■□□□□ 0.71
CLPTM1-201ENST00000337392 OR5H1A6NKK0 313 aa19.46■□□□□ 0.71
CLPTM1-201ENST00000337392 CDS2O95674 445 aa19.46■□□□□ 0.71
CLPTM1-201ENST00000337392 BMP5P22003 454 aa19.46■□□□□ 0.71
CLPTM1-201ENST00000337392 FAM27E3Q08E93 113 aa19.46■□□□□ 0.71
CLPTM1-201ENST00000337392 FAM201AQ5SY85 155 aa19.46■□□□□ 0.71
CLPTM1-201ENST00000337392 IGF2-ASQ6U949 168 aa19.46■□□□□ 0.71
CLPTM1-201ENST00000337392 Q6ZRM9 215 aa19.46■□□□□ 0.71
CLPTM1-201ENST00000337392 EIF4E3Q8N5X7 224 aaKnown RBP19.46■□□□□ 0.71
CLPTM1-201ENST00000337392 BCL2L14Q9BZR8 327 aa19.46■□□□□ 0.71
CLPTM1-201ENST00000337392 TMED3Q9Y3Q3 217 aa19.46■□□□□ 0.71
CLPTM1-201ENST00000337392 OR3A1P47881 315 aa19.45■□□□□ 0.7
CLPTM1-201ENST00000337392 GUCA2BQ16661 112 aa19.45■□□□□ 0.7
CLPTM1-201ENST00000337392 SNIP1Q8TAD8 396 aaKnown RBP19.45■□□□□ 0.7
CLPTM1-201ENST00000337392 MRGPRDQ8TDS7 321 aa19.45■□□□□ 0.7
CLPTM1-201ENST00000337392 IGSF23A1L1A6 192 aa19.45■□□□□ 0.7
CLPTM1-201ENST00000337392 DEFB108AA8MXU0 73 aa19.45■□□□□ 0.7
CLPTM1-201ENST00000337392 SSTR5P35346 364 aa19.45■□□□□ 0.7
CLPTM1-201ENST00000337392 NKX2-1P43699 371 aaPredicted RBP19.45■□□□□ 0.7
CLPTM1-201ENST00000337392 ZNF146Q15072 292 aa19.45■□□□□ 0.7
CLPTM1-201ENST00000337392 Q6ZS92 163 aa19.45■□□□□ 0.7
CLPTM1-201ENST00000337392 CMTM1Q8IZ96 169 aa19.45■□□□□ 0.7
CLPTM1-201ENST00000337392 OR52L2PQ8NGH6 319 aa19.45■□□□□ 0.7
CLPTM1-201ENST00000337392 TMEM56Q96MV1 263 aa19.45■□□□□ 0.7
CLPTM1-201ENST00000337392 TMEM56-RWDD3S4R434 201 aa19.45■□□□□ 0.7
CLPTM1-201ENST00000337392 IGHV3OR15-7A0A075B7D8 119 aa19.44■□□□□ 0.7
CLPTM1-201ENST00000337392 FAM74A7A6NL05 159 aa19.44■□□□□ 0.7
CLPTM1-201ENST00000337392 SH2D1BO14796 132 aa19.44■□□□□ 0.7
CLPTM1-201ENST00000337392 IGKV1-39P01597 117 aa19.44■□□□□ 0.7
CLPTM1-201ENST00000337392 IGKV1D-39P04432 117 aa19.44■□□□□ 0.7
CLPTM1-201ENST00000337392 EGR1P18146 543 aa19.44■□□□□ 0.7
CLPTM1-201ENST00000337392 F2RP25116 425 aa19.44■□□□□ 0.7
CLPTM1-201ENST00000337392 EIF2S3P41091 472 aaKnown RBP19.44■□□□□ 0.7
CLPTM1-201ENST00000337392 FAM74A3Q4VXF1 159 aa19.44■□□□□ 0.7
CLPTM1-201ENST00000337392 LINC00596Q86U02 117 aa19.44■□□□□ 0.7
CLPTM1-201ENST00000337392 OR10V1Q8NGI7 309 aa19.44■□□□□ 0.7
CLPTM1-201ENST00000337392 SLC25A15Q9Y619 301 aa19.44■□□□□ 0.7
CLPTM1-201ENST00000337392 S100A6P06703 90 aa19.44■□□□□ 0.7
CLPTM1-201ENST00000337392 GABRA2P47869 451 aa19.44■□□□□ 0.7
CLPTM1-201ENST00000337392 GLIPR1P48060 266 aa19.44■□□□□ 0.7
CLPTM1-201ENST00000337392 FOXC1Q12948 553 aa19.44■□□□□ 0.7
CLPTM1-201ENST00000337392 ZNF808Q8N4W9 903 aaPredicted RBP19.44■□□□□ 0.7
CLPTM1-201ENST00000337392 ABHD17AQ96GS6 310 aa19.44■□□□□ 0.7
CLPTM1-201ENST00000337392 TAAR3PQ9P1P4 343 aa19.44■□□□□ 0.7
CLPTM1-201ENST00000337392 MBD3L4A6NDZ8 208 aaPredicted RBP19.43■□□□□ 0.7
CLPTM1-201ENST00000337392 MBD3L3A6NE82 208 aaPredicted RBP19.43■□□□□ 0.7
CLPTM1-201ENST00000337392 MBD3L5A6NJ08 208 aaPredicted RBP19.43■□□□□ 0.7
CLPTM1-201ENST00000337392 GCH1P30793 250 aa19.43■□□□□ 0.7
CLPTM1-201ENST00000337392 EDDM3AQ14507 147 aa19.43■□□□□ 0.7
CLPTM1-201ENST00000337392 NMSQ5H8A3 153 aa19.43■□□□□ 0.7
CLPTM1-201ENST00000337392 ODF3L1Q8IXM7 274 aa19.43■□□□□ 0.7
CLPTM1-201ENST00000337392 MBD3L2Q8NHZ7 208 aaPredicted RBP19.43■□□□□ 0.7
CLPTM1-201ENST00000337392 COQ2Q96H96 371 aa19.43■□□□□ 0.7
CLPTM1-201ENST00000337392 IGLV1-44P01699 117 aa19.43■□□□□ 0.7
CLPTM1-201ENST00000337392 UCP1P25874 307 aa19.43■□□□□ 0.7
CLPTM1-201ENST00000337392 Q6ZRG5 221 aa19.43■□□□□ 0.7
CLPTM1-201ENST00000337392 TMEM171Q8WVE6 324 aa19.43■□□□□ 0.7
CLPTM1-201ENST00000337392 POMT1Q9Y6A1 747 aa19.43■□□□□ 0.7
CLPTM1-201ENST00000337392 NBL1P41271 181 aa19.42■□□□□ 0.7
CLPTM1-201ENST00000337392 EWSR1Q01844 656 aaKnown RBP eCLIP19.42■□□□□ 0.7
CLPTM1-201ENST00000337392 PIGMQ9H3S5 423 aa19.42■□□□□ 0.7
CLPTM1-201ENST00000337392 TREM1Q9NP99 234 aa19.42■□□□□ 0.7
CLPTM1-201ENST00000337392 C12orf77C9JDV5 145 aa19.42■□□□□ 0.7
CLPTM1-201ENST00000337392 C9JQL5 133 aa19.42■□□□□ 0.7
CLPTM1-201ENST00000337392 SRSF7Q16629 238 aaKnown RBP eCLIP19.42■□□□□ 0.7
CLPTM1-201ENST00000337392 BOD1Q96IK1 185 aa19.42■□□□□ 0.7
CLPTM1-201ENST00000337392 CABLES2Q9BTV7 478 aa19.42■□□□□ 0.7
CLPTM1-201ENST00000337392 RIMS4Q9H426 269 aaPredicted RBP19.42■□□□□ 0.7
CLPTM1-201ENST00000337392 PLA2G5P39877 138 aa19.41■□□□□ 0.7
CLPTM1-201ENST00000337392 COL10A1Q03692 680 aa19.41■□□□□ 0.7
CLPTM1-201ENST00000337392 BTNL3Q6UXE8 466 aa19.41■□□□□ 0.7
CLPTM1-201ENST00000337392 ACP7Q6ZNF0 438 aa19.41■□□□□ 0.7
CLPTM1-201ENST00000337392 C5orf30Q96GV9 206 aa19.41■□□□□ 0.7
CLPTM1-201ENST00000337392 CTXN2P0C2S0 81 aa19.41■□□□□ 0.7
CLPTM1-201ENST00000337392 MUC1P15941 1255 aaPredicted RBP19.41■□□□□ 0.7
CLPTM1-201ENST00000337392 PPP1CCP36873 323 aaKnown RBP19.41■□□□□ 0.7
CLPTM1-201ENST00000337392 ZNF718Q3SXZ3 478 aa19.41■□□□□ 0.7
CLPTM1-201ENST00000337392 TMEM88Q6PEY1 159 aa19.41■□□□□ 0.7
CLPTM1-201ENST00000337392 LRRC29Q8WV35 223 aa19.41■□□□□ 0.7
CLPTM1-201ENST00000337392 GPR146Q96CH1 333 aa19.41■□□□□ 0.7
CLPTM1-201ENST00000337392 POM121Q96HA1 1249 aa19.41■□□□□ 0.7
CLPTM1-201ENST00000337392 ABHD14AQ9BUJ0 271 aa19.41■□□□□ 0.7
CLPTM1-201ENST00000337392 DNTTIP1Q9H147 329 aa19.41■□□□□ 0.7
CLPTM1-201ENST00000337392 TLNRD1Q9H1K6 362 aa19.41■□□□□ 0.7
CLPTM1-201ENST00000337392 TRBV6-6A0A0A6YYG2 114 aa19.4■□□□□ 0.7
CLPTM1-201ENST00000337392 J3QW42 95 aa19.4■□□□□ 0.7
CLPTM1-201ENST00000337392 CHST1O43916 411 aa19.4■□□□□ 0.7
CLPTM1-201ENST00000337392 PRR30Q53SZ7 412 aaPredicted RBP19.4■□□□□ 0.7
CLPTM1-201ENST00000337392 IGFL3Q6UXB1 125 aa19.4■□□□□ 0.7
CLPTM1-201ENST00000337392 CISD2Q8N5K1 135 aaKnown RBP19.4■□□□□ 0.7
CLPTM1-201ENST00000337392 OR2C3Q8N628 320 aa19.4■□□□□ 0.7
CLPTM1-201ENST00000337392 ARL11Q969Q4 196 aa19.4■□□□□ 0.7
CLPTM1-201ENST00000337392 TP53TG5Q9Y2B4 290 aa19.4■□□□□ 0.7
CLPTM1-201ENST00000337392 GPR137BO60478 399 aa19.4■□□□□ 0.7
CLPTM1-201ENST00000337392 RAMP3O60896 148 aa19.4■□□□□ 0.7
CLPTM1-201ENST00000337392 SERPINE2P07093 398 aa19.4■□□□□ 0.7
CLPTM1-201ENST00000337392 SELLP14151 372 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms