RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 ABHD14BQ96IU4 210 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 NAT8Q9UHE5 227 aa11.78□□□□□ -0.52
SYNE3-201ENST00000334258 TIAF1O95411 115 aa11.77□□□□□ -0.52
SYNE3-201ENST00000334258 PAX9P55771 341 aa11.77□□□□□ -0.52
SYNE3-201ENST00000334258 RTP5Q14D33 572 aa11.77□□□□□ -0.52
SYNE3-201ENST00000334258 MRGPRGQ86SM5 289 aa11.77□□□□□ -0.52
SYNE3-201ENST00000334258 RNASEH2CQ8TDP1 164 aaKnown RBP11.77□□□□□ -0.52
SYNE3-201ENST00000334258 SLC22A20A6NK97 555 aa11.77□□□□□ -0.53
SYNE3-201ENST00000334258 LINC00614P0C842 121 aa11.77□□□□□ -0.53
SYNE3-201ENST00000334258 ZNF16P17020 682 aaPredicted RBP11.77□□□□□ -0.53
SYNE3-201ENST00000334258 CEACAM6P40199 344 aa11.77□□□□□ -0.53
SYNE3-201ENST00000334258 FUT6P51993 359 aa11.77□□□□□ -0.53
SYNE3-201ENST00000334258 OR8B8Q15620 311 aa11.77□□□□□ -0.53
SYNE3-201ENST00000334258 BEND2Q8NDZ0 799 aa11.77□□□□□ -0.53
SYNE3-201ENST00000334258 OR1F12Q8NHA8 337 aa11.77□□□□□ -0.53
SYNE3-201ENST00000334258 FAM122AQ96E09 287 aa11.77□□□□□ -0.53
SYNE3-201ENST00000334258 DIRC2Q96SL1 478 aa11.77□□□□□ -0.53
SYNE3-201ENST00000334258 ZNF407Q9C0G0 2248 aa11.77□□□□□ -0.53
SYNE3-201ENST00000334258 M0R143 59 aa11.77□□□□□ -0.53
SYNE3-201ENST00000334258 ETV2O00321 342 aaPredicted RBP11.77□□□□□ -0.53
SYNE3-201ENST00000334258 OR4A8P0C604 315 aa11.77□□□□□ -0.53
SYNE3-201ENST00000334258 B4GALT1P15291 398 aa11.77□□□□□ -0.53
SYNE3-201ENST00000334258 UCP1P25874 307 aa11.77□□□□□ -0.53
SYNE3-201ENST00000334258 MDH2P40926 338 aaKnown RBP11.77□□□□□ -0.53
SYNE3-201ENST00000334258 PTGDSP41222 190 aa11.77□□□□□ -0.53
SYNE3-201ENST00000334258 BATFQ16520 125 aa11.77□□□□□ -0.53
SYNE3-201ENST00000334258 C10orf128Q5T292 105 aa11.77□□□□□ -0.53
SYNE3-201ENST00000334258 LYSMD4Q5XG99 296 aa11.77□□□□□ -0.53
SYNE3-201ENST00000334258 CALHM1Q8IU99 346 aa11.77□□□□□ -0.53
SYNE3-201ENST00000334258 ELOVL1Q9BW60 279 aa11.77□□□□□ -0.53
SYNE3-201ENST00000334258 CEP192Q8TEP8 1941 aa11.76□□□□□ -0.53
SYNE3-201ENST00000334258 A0A1W2PR80 420 aa11.76□□□□□ -0.53
SYNE3-201ENST00000334258 ZNF726P1Q15940 193 aa11.76□□□□□ -0.53
SYNE3-201ENST00000334258 IQCJQ1A5X6 159 aa11.76□□□□□ -0.53
SYNE3-201ENST00000334258 SP5Q6BEB4 398 aaPredicted RBP11.76□□□□□ -0.53
SYNE3-201ENST00000334258 ZNF501Q96CX3 271 aaPredicted RBP11.76□□□□□ -0.53
SYNE3-201ENST00000334258 PLSCR2Q9NRY7 297 aa11.76□□□□□ -0.53
SYNE3-201ENST00000334258 TAAR3PQ9P1P4 343 aa11.76□□□□□ -0.53
SYNE3-201ENST00000334258 FER1L5A0AVI2 2057 aa11.76□□□□□ -0.53
SYNE3-201ENST00000334258 CBY3A6NI87 242 aa11.76□□□□□ -0.53
SYNE3-201ENST00000334258 HLA-BQ31612 363 aa11.76□□□□□ -0.53
SYNE3-201ENST00000334258 SPANXN5Q5MJ07 72 aa11.76□□□□□ -0.53
SYNE3-201ENST00000334258 SSX7Q7RTT5 188 aa11.76□□□□□ -0.53
SYNE3-201ENST00000334258 CADM4Q8NFZ8 388 aa11.76□□□□□ -0.53
SYNE3-201ENST00000334258 PLPPR1Q8TBJ4 325 aa11.76□□□□□ -0.53
SYNE3-201ENST00000334258 GPR146Q96CH1 333 aa11.76□□□□□ -0.53
SYNE3-201ENST00000334258 PSENENQ9NZ42 101 aa11.76□□□□□ -0.53
SYNE3-201ENST00000334258 RBM7Q9Y580 266 aaKnown RBP11.76□□□□□ -0.53
SYNE3-201ENST00000334258 CHD3Q12873 2000 aaKnown RBP11.75□□□□□ -0.53
SYNE3-201ENST00000334258 A0A0G2JRQ6 117 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 CD300LBA8K4G0 201 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 PFN1P07737 140 aaKnown RBP11.75□□□□□ -0.53
SYNE3-201ENST00000334258 ZNF32P17041 273 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 CEACAM8P31997 349 aaPredicted RBP11.75□□□□□ -0.53
SYNE3-201ENST00000334258 ZNF92Q03936 586 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 RAB35Q15286 201 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 FAM27BQ5VT28 67 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 SPACA9Q96E40 222 aaPredicted RBP11.75□□□□□ -0.53
SYNE3-201ENST00000334258 RAB40CQ96S21 281 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 P2RX4Q99571 388 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 CACNG5Q9UF02 275 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 RNF150Q9ULK6 438 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 RNF115Q9Y4L5 304 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 LRRC3CA6NJW4 275 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 ZNF705FA8MVS1 300 aaPredicted RBP11.75□□□□□ -0.53
SYNE3-201ENST00000334258 SIAH2O43255 324 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 NXPH2O95156 264 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 ZNF705DP0CH99 300 aaPredicted RBP11.75□□□□□ -0.53
SYNE3-201ENST00000334258 ZNF705BP0CI00 300 aaPredicted RBP11.75□□□□□ -0.53
SYNE3-201ENST00000334258 PAX1P15863 534 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 GZMHP20718 246 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 CCNOP22674 350 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 RPL29P47914 159 aaKnown RBP11.75□□□□□ -0.53
SYNE3-201ENST00000334258 IL1F10Q8WWZ1 152 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 ALKBH3Q96Q83 286 aaPredicted RBP11.75□□□□□ -0.53
SYNE3-201ENST00000334258 RASL10BQ96S79 203 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 OR51I2Q9H344 312 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 RPH3ALQ9UNE2 315 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 A8MXE2 369 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 PGLYRP1O75594 196 aaPredicted RBP11.75□□□□□ -0.53
SYNE3-201ENST00000334258 IL18BPO95998 194 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 HBG1P69891 147 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 HBG2P69892 147 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 OR8G2PQ6IF36 304 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 TMEM54Q969K7 222 aa11.75□□□□□ -0.53
SYNE3-201ENST00000334258 LOC102725191A0A1B0GVB3 256 aa11.74□□□□□ -0.53
SYNE3-201ENST00000334258 PSG2P11465 335 aa11.74□□□□□ -0.53
SYNE3-201ENST00000334258 FGF5P12034 268 aa11.74□□□□□ -0.53
SYNE3-201ENST00000334258 MEF2BQ02080 365 aaPredicted RBP11.74□□□□□ -0.53
SYNE3-201ENST00000334258 ZNF705AQ6ZN79 300 aaPredicted RBP11.74□□□□□ -0.53
SYNE3-201ENST00000334258 OR51G1Q8NGK1 321 aa11.74□□□□□ -0.53
SYNE3-201ENST00000334258 OR1K1Q8NGR3 316 aa11.74□□□□□ -0.53
SYNE3-201ENST00000334258 OR4F5Q8NH21 305 aa11.74□□□□□ -0.53
SYNE3-201ENST00000334258 OR4F4Q96R69 305 aa11.74□□□□□ -0.53
SYNE3-201ENST00000334258 OR6C1Q96RD1 312 aa11.74□□□□□ -0.53
SYNE3-201ENST00000334258 MGAQ8IWI9 3026 aa11.74□□□□□ -0.53
SYNE3-201ENST00000334258 DUXBA0A1W2PPF3 345 aa11.74□□□□□ -0.53
SYNE3-201ENST00000334258 TP53I11O14683 189 aa11.74□□□□□ -0.53
SYNE3-201ENST00000334258 ZNHIT1O43257 154 aa11.74□□□□□ -0.53
SYNE3-201ENST00000334258 F2RP25116 425 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms