RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 NEIL1Q96FI4 390 aaPredicted RBP8.84□□□□□ -0.99
CHD3-201ENST00000330494 CHODLQ9H9P2 273 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 CTSDP07339 412 aaPredicted RBP8.84□□□□□ -0.99
CHD3-201ENST00000330494 TMPRSS3P57727 454 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 LHFPL5Q8TAF8 219 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 DNASE2BQ8WZ79 361 aa8.84□□□□□ -0.99
CHD3-201ENST00000330494 AURKAIP1Q9NWT8 199 aaPredicted RBP8.84□□□□□ -0.99
CHD3-201ENST00000330494 TRBV23-1A0A0A0MS06 115 aa8.84□□□□□ -1
CHD3-201ENST00000330494 SYNGR1O43759 233 aa8.84□□□□□ -1
CHD3-201ENST00000330494 ANKRD34CP0C6C1 535 aa8.84□□□□□ -1
CHD3-201ENST00000330494 PPOXP50336 477 aa8.84□□□□□ -1
CHD3-201ENST00000330494 FA2HQ7L5A8 372 aa8.84□□□□□ -1
CHD3-201ENST00000330494 ITLN1Q8WWA0 313 aa8.84□□□□□ -1
CHD3-201ENST00000330494 ST6GAL2Q96JF0 529 aa8.84□□□□□ -1
CHD3-201ENST00000330494 ANGPTL4Q9BY76 406 aa8.84□□□□□ -1
CHD3-201ENST00000330494 SH2D2AQ9NP31 389 aa8.84□□□□□ -1
CHD3-201ENST00000330494 ELF5Q9UKW6 265 aaPredicted RBP8.84□□□□□ -1
CHD3-201ENST00000330494 WDR90Q96KV7 1748 aa8.83□□□□□ -1
CHD3-201ENST00000330494 ZNF646O15015 1829 aaPredicted RBP8.83□□□□□ -1
CHD3-201ENST00000330494 AWAT1Q58HT5 328 aa8.83□□□□□ -1
CHD3-201ENST00000330494 FDCSPQ8NFU4 85 aa8.83□□□□□ -1
CHD3-201ENST00000330494 UFC1Q9Y3C8 167 aa8.83□□□□□ -1
CHD3-201ENST00000330494 PRR19A6NJB7 356 aa8.83□□□□□ -1
CHD3-201ENST00000330494 RPL36A-HNRNPH2H7BZ11 118 aa8.83□□□□□ -1
CHD3-201ENST00000330494 CLDN34H7C241 214 aa8.83□□□□□ -1
CHD3-201ENST00000330494 SYNGR2O43760 224 aa8.83□□□□□ -1
CHD3-201ENST00000330494 GNG7O60262 68 aa8.83□□□□□ -1
CHD3-201ENST00000330494 FAM214BQ7L5A3 538 aa8.83□□□□□ -1
CHD3-201ENST00000330494 DTD1Q8TEA8 209 aa8.83□□□□□ -1
CHD3-201ENST00000330494 WIPI2Q9Y4P8 454 aa8.83□□□□□ -1
CHD3-201ENST00000330494 ESPL1Q14674 2120 aa8.83□□□□□ -1
CHD3-201ENST00000330494 DXOO77932 396 aaKnown RBP8.83□□□□□ -1
CHD3-201ENST00000330494 LIMS1P48059 325 aa8.83□□□□□ -1
CHD3-201ENST00000330494 ZNF79Q15937 498 aa8.83□□□□□ -1
CHD3-201ENST00000330494 OIT3Q8WWZ8 545 aa8.83□□□□□ -1
CHD3-201ENST00000330494 SLC35B3Q9H1N7 401 aa8.83□□□□□ -1
CHD3-201ENST00000330494 PCDHGA9Q9Y5G4 932 aaKnown RBP8.83□□□□□ -1
CHD3-201ENST00000330494 DOCK8Q8NF50 2099 aa8.83□□□□□ -1
CHD3-201ENST00000330494 FBP1P09467 338 aa8.83□□□□□ -1
CHD3-201ENST00000330494 SCTP09683 121 aa8.83□□□□□ -1
CHD3-201ENST00000330494 IRF3Q14653 427 aa8.83□□□□□ -1
CHD3-201ENST00000330494 PSG5Q15238 335 aa8.83□□□□□ -1
CHD3-201ENST00000330494 DDA1Q9BW61 102 aa8.83□□□□□ -1
CHD3-201ENST00000330494 PPIAL4EA0A075B759 164 aa8.83□□□□□ -1
CHD3-201ENST00000330494 PPIAL4DF5H284 164 aa8.83□□□□□ -1
CHD3-201ENST00000330494 PPIAL4FP0DN26 164 aa8.83□□□□□ -1
CHD3-201ENST00000330494 CACFD1Q9UGQ2 172 aa8.83□□□□□ -1
CHD3-201ENST00000330494 PAM16Q9Y3D7 125 aa8.83□□□□□ -1
CHD3-201ENST00000330494 PPIAL4AQ9Y536 164 aa8.83□□□□□ -1
CHD3-201ENST00000330494 FBLL1A6NHQ2 334 aaKnown RBP8.82□□□□□ -1
CHD3-201ENST00000330494 NPIPB8E9PQR5 432 aa8.82□□□□□ -1
CHD3-201ENST00000330494 FCN1O00602 326 aa8.82□□□□□ -1
CHD3-201ENST00000330494 OR5AL1P0C617 328 aa8.82□□□□□ -1
CHD3-201ENST00000330494 TMEM50BP56557 158 aa8.82□□□□□ -1
CHD3-201ENST00000330494 UBE2L3P68036 154 aaKnown RBP8.82□□□□□ -1
CHD3-201ENST00000330494 FAM78BQ5VT40 261 aa8.82□□□□□ -1
CHD3-201ENST00000330494 MS4A5Q9H3V2 200 aa8.82□□□□□ -1
CHD3-201ENST00000330494 IGHV3OR16-10A0A075B7F0 116 aa8.82□□□□□ -1
CHD3-201ENST00000330494 H3BVH4 76 aa8.82□□□□□ -1
CHD3-201ENST00000330494 SIAH2O43255 324 aa8.82□□□□□ -1
CHD3-201ENST00000330494 GSTZ1O43708 216 aaPredicted RBP8.82□□□□□ -1
CHD3-201ENST00000330494 RBM11P57052 281 aaKnown RBP8.82□□□□□ -1
CHD3-201ENST00000330494 SCAND1P57086 179 aa8.82□□□□□ -1
CHD3-201ENST00000330494 LILRB1Q8NHL6 650 aaPredicted RBP8.82□□□□□ -1
CHD3-201ENST00000330494 TMEM171Q8WVE6 324 aa8.82□□□□□ -1
CHD3-201ENST00000330494 SIGLEC12Q96PQ1 595 aa8.82□□□□□ -1
CHD3-201ENST00000330494 ZNF552Q9H707 407 aaPredicted RBP8.82□□□□□ -1
CHD3-201ENST00000330494 KCNK7Q9Y2U2 307 aa8.82□□□□□ -1
CHD3-201ENST00000330494 OR2W1Q9Y3N9 320 aa8.82□□□□□ -1
CHD3-201ENST00000330494 KLF9Q13886 244 aaPredicted RBP8.82□□□□□ -1
CHD3-201ENST00000330494 TMEM241Q24JQ0 296 aa8.82□□□□□ -1
CHD3-201ENST00000330494 PGLYRP3Q96LB9 341 aa8.82□□□□□ -1
CHD3-201ENST00000330494 CA10Q9NS85 328 aa8.82□□□□□ -1
CHD3-201ENST00000330494 CELA3AP09093 270 aa8.82□□□□□ -1
CHD3-201ENST00000330494 BRS3P32247 399 aa8.82□□□□□ -1
CHD3-201ENST00000330494 DPPA3Q6W0C5 159 aa8.82□□□□□ -1
CHD3-201ENST00000330494 RCC2Q9P258 522 aaKnown RBP8.82□□□□□ -1
CHD3-201ENST00000330494 CTDSPLO15194 276 aa8.82□□□□□ -1
CHD3-201ENST00000330494 PLA2G10O15496 165 aa8.82□□□□□ -1
CHD3-201ENST00000330494 RPL7P18124 248 aaKnown RBP8.82□□□□□ -1
CHD3-201ENST00000330494 RCC1P18754 421 aaPredicted RBP8.82□□□□□ -1
CHD3-201ENST00000330494 ACP1P24666 158 aa8.82□□□□□ -1
CHD3-201ENST00000330494 LTBRP36941 435 aa8.82□□□□□ -1
CHD3-201ENST00000330494 ZP4Q12836 540 aa8.82□□□□□ -1
CHD3-201ENST00000330494 PCOLCEQ15113 449 aa8.82□□□□□ -1
CHD3-201ENST00000330494 SLC25A42Q86VD7 318 aa8.82□□□□□ -1
CHD3-201ENST00000330494 ASB13Q8WXK3 278 aa8.82□□□□□ -1
CHD3-201ENST00000330494 ATP5SQ99766 215 aa8.82□□□□□ -1
CHD3-201ENST00000330494 SOSTQ9BQB4 213 aa8.82□□□□□ -1
CHD3-201ENST00000330494 SDK2Q58EX2 2172 aa8.82□□□□□ -1
CHD3-201ENST00000330494 MMDQ15546 238 aa8.82□□□□□ -1
CHD3-201ENST00000330494 OR4A47Q6IF82 309 aa8.82□□□□□ -1
CHD3-201ENST00000330494 LPAR5Q9H1C0 372 aa8.82□□□□□ -1
CHD3-201ENST00000330494 THYN1Q9P016 225 aa8.82□□□□□ -1
CHD3-201ENST00000330494 SLC45A2Q9UMX9 530 aa8.82□□□□□ -1
CHD3-201ENST00000330494 RFPL3SP0C7P2 107 aa8.81□□□□□ -1
CHD3-201ENST00000330494 PDPNQ86YL7 162 aa8.81□□□□□ -1
CHD3-201ENST00000330494 CHRDL1Q9BU40 450 aa8.81□□□□□ -1
CHD3-201ENST00000330494 RTTNQ86VV8 2226 aa8.81□□□□□ -1
CHD3-201ENST00000330494 FAM27BQ5VT28 67 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms