RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 RPS27P42677 84 aaKnown RBP13.62□□□□□ -0.23
HCFC1-201ENST00000310441 PSG9Q00887 426 aa13.62□□□□□ -0.23
HCFC1-201ENST00000310441 ZNF841Q6ZN19 808 aa13.62□□□□□ -0.23
HCFC1-201ENST00000310441 OR10AG1Q8NH19 301 aa13.62□□□□□ -0.23
HCFC1-201ENST00000310441 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.62□□□□□ -0.231e-6■■■□□ 17.2
HCFC1-201ENST00000310441 FOXB2Q5VYV0 432 aa13.62□□□□□ -0.23
HCFC1-201ENST00000310441 OR8B12Q8NGG6 310 aa13.62□□□□□ -0.23
HCFC1-201ENST00000310441 OR51B2Q9Y5P1 312 aa13.62□□□□□ -0.23
HCFC1-201ENST00000310441 C17orf51A8MQB3 221 aa13.62□□□□□ -0.23
HCFC1-201ENST00000310441 SPATA45Q537H7 98 aa13.62□□□□□ -0.23
HCFC1-201ENST00000310441 FAM209AQ5JX71 171 aa13.62□□□□□ -0.23
HCFC1-201ENST00000310441 C21orf140B9A014 251 aa13.62□□□□□ -0.23
HCFC1-201ENST00000310441 POLR2GP62487 172 aaKnown RBP eCLIP13.62□□□□□ -0.23
HCFC1-201ENST00000310441 CHST5Q9GZS9 411 aa13.62□□□□□ -0.23
HCFC1-201ENST00000310441 PRDM7Q9NQW5 492 aa13.62□□□□□ -0.23
HCFC1-201ENST00000310441 RSRP1Q9BUV0 290 aa13.62□□□□□ -0.23
HCFC1-201ENST00000310441 C19orf24Q9BVV8 132 aa13.62□□□□□ -0.23
HCFC1-201ENST00000310441 HYPMO75409 117 aa13.62□□□□□ -0.23
HCFC1-201ENST00000310441 OR2A4O95047 310 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 HINT1P49773 126 aaPredicted RBP13.61□□□□□ -0.23
HCFC1-201ENST00000310441 ISXQ2M1V0 245 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 MRPL54Q6P161 138 aaKnown RBP13.61□□□□□ -0.23
HCFC1-201ENST00000310441 SGMS2Q8NHU3 365 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 LSM10Q969L4 123 aaKnown RBP13.61□□□□□ -0.23
HCFC1-201ENST00000310441 OR2A7Q96R45 310 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 OPN4Q9UHM6 478 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 TMEM189A5PLL7 270 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 CYB5R3P00387 301 aaPredicted RBP13.61□□□□□ -0.23
HCFC1-201ENST00000310441 TSPOP30536 169 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 PATE1Q8WXA2 126 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 RND1Q92730 232 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 C11orf68Q9H3H3 251 aaKnown RBP13.61□□□□□ -0.23
HCFC1-201ENST00000310441 AHDC1Q5TGY3 1603 aaPredicted RBP13.61□□□□□ -0.23
HCFC1-201ENST00000310441 A0A1W2PQD3 144 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 PRSS8Q16651 343 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 PRNTQ86SH4 94 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 MS4A4AQ96JQ5 239 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 LRRC75AQ8NAA5 344 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 RFESDQ8TAC1 157 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 GPA33Q99795 319 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 HMGA2P52926 109 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 MFAP2P55001 183 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 AESQ08117 197 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 SPINK9Q5DT21 86 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 C10orf128Q5T292 105 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 ANKRD37Q7Z713 158 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 SSMEM1Q8WWF3 244 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 WFIKKN1Q96NZ8 548 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 TRAF4Q9BUZ4 470 aaPredicted RBP13.61□□□□□ -0.23
HCFC1-201ENST00000310441 MS4A5Q9H3V2 200 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 GAPDHP04406 335 aaKnown RBP13.61□□□□□ -0.23
HCFC1-201ENST00000310441 FOLR2P14207 255 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 ABHD14AQ9BUJ0 271 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 ARRDC1-AS1Q9H2J1 176 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 RABAC1Q9UI14 185 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 C7orf77A4D0Y5 90 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 TCL1AP56279 114 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 NPVFQ9HCQ7 196 aa13.61□□□□□ -0.23
HCFC1-201ENST00000310441 TCF21O43680 179 aa13.6□□□□□ -0.23
HCFC1-201ENST00000310441 ERVFRD-1P60508 538 aa13.6□□□□□ -0.23
HCFC1-201ENST00000310441 NEURL2Q9BR09 285 aa13.6□□□□□ -0.23
HCFC1-201ENST00000310441 SIRT5Q9NXA8 310 aa13.6□□□□□ -0.23
HCFC1-201ENST00000310441 MBD1Q9UIS9 605 aaPredicted RBP13.6□□□□□ -0.23
HCFC1-201ENST00000310441 ADAMTS17Q8TE56 1095 aa13.6□□□□□ -0.23
HCFC1-201ENST00000310441 C16orf92Q96LL3 132 aa13.6□□□□□ -0.23
HCFC1-201ENST00000310441 TNFSF18Q9UNG2 199 aa13.6□□□□□ -0.23
HCFC1-201ENST00000310441 TMEM56-RWDD3S4R434 201 aa13.6□□□□□ -0.23
HCFC1-201ENST00000310441 EMP1P54849 157 aa13.6□□□□□ -0.23
HCFC1-201ENST00000310441 SEZ6L2Q6UXD5 910 aa13.6□□□□□ -0.23
HCFC1-201ENST00000310441 KIR2DL4Q99706 377 aa13.6□□□□□ -0.23
HCFC1-201ENST00000310441 J3QR06 171 aa13.6□□□□□ -0.23
HCFC1-201ENST00000310441 WDR25Q64LD2 544 aaPredicted RBP13.6□□□□□ -0.23
HCFC1-201ENST00000310441 C2orf88Q9BSF0 95 aa13.6□□□□□ -0.23
HCFC1-201ENST00000310441 RNF7Q9UBF6 113 aa13.6□□□□□ -0.23
HCFC1-201ENST00000310441 TMEFF2Q9UIK5 374 aaPredicted RBP13.6□□□□□ -0.23
HCFC1-201ENST00000310441 AMY1AP04745 511 aa13.6□□□□□ -0.23
HCFC1-201ENST00000310441 ARG1P05089 322 aa13.6□□□□□ -0.23
HCFC1-201ENST00000310441 MC5RP33032 325 aa13.6□□□□□ -0.23
HCFC1-201ENST00000310441 SH3BGRL3Q9H299 93 aa13.6□□□□□ -0.23
HCFC1-201ENST00000310441 FBLL1A6NHQ2 334 aaKnown RBP13.6□□□□□ -0.23
HCFC1-201ENST00000310441 FAM106CPP0CH98 169 aa13.6□□□□□ -0.23
HCFC1-201ENST00000310441 WIPI1Q5MNZ9 446 aaPredicted RBP13.6□□□□□ -0.23
HCFC1-201ENST00000310441 SLC23A3Q6PIS1 610 aa13.6□□□□□ -0.23
HCFC1-201ENST00000310441 CLEC18BQ6UXF7 455 aa13.6□□□□□ -0.23
HCFC1-201ENST00000310441 GAPTQ8N292 157 aa13.6□□□□□ -0.23
HCFC1-201ENST00000310441 PCOLCE2Q9UKZ9 415 aa13.6□□□□□ -0.23
HCFC1-201ENST00000310441 IGLV3-16A0A075B6K0 115 aa13.59□□□□□ -0.23
HCFC1-201ENST00000310441 FZR1Q9UM11 496 aa13.59□□□□□ -0.23
HCFC1-201ENST00000310441 KBTBD11O94819 623 aa13.59□□□□□ -0.23
HCFC1-201ENST00000310441 HPRT1P00492 218 aa13.59□□□□□ -0.23
HCFC1-201ENST00000310441 LAMTOR1Q6IAA8 161 aa13.59□□□□□ -0.23
HCFC1-201ENST00000310441 INO80CQ6PI98 192 aaPredicted RBP13.59□□□□□ -0.23
HCFC1-201ENST00000310441 SLC16A13Q7RTY0 426 aa13.59□□□□□ -0.23
HCFC1-201ENST00000310441 LINC00862A6NCI5 91 aa13.59□□□□□ -0.23
HCFC1-201ENST00000310441 LHFPL5Q8TAF8 219 aa13.59□□□□□ -0.23
HCFC1-201ENST00000310441 GEMIN7Q9H840 131 aaKnown RBP13.59□□□□□ -0.23
HCFC1-201ENST00000310441 DAOP14920 347 aa13.59□□□□□ -0.23
HCFC1-201ENST00000310441 KLRB1Q12918 225 aa13.59□□□□□ -0.23
HCFC1-201ENST00000310441 MRGPRFQ96AM1 343 aa13.59□□□□□ -0.23
HCFC1-201ENST00000310441 BRCA1P38398 1863 aaKnown RBP13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms