RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 PRDX2P32119 198 aa18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 GABRA2P47869 451 aa18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 CDSNQ15517 529 aa18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 CABLES2Q9BTV7 478 aa18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 MBNL3Q9NUK0 354 aaKnown RBP18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 DUX4Q9UBX2 424 aa18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 IGKV1D-17A0A075B6S4 117 aa18.81■□□□□ 0.6
PDLIM2-202ENST00000308354 TMEM30CPA0ZSE6 113 aa18.81■□□□□ 0.6
PDLIM2-202ENST00000308354 TGIF2LYQ8IUE0 185 aa18.81■□□□□ 0.6
PDLIM2-202ENST00000308354 H1FOOQ8IZA3 346 aaPredicted RBP18.81■□□□□ 0.6
PDLIM2-202ENST00000308354 KDF1Q8NAX2 398 aaPredicted RBP18.81■□□□□ 0.6
PDLIM2-202ENST00000308354 PRR7Q8TB68 274 aa18.81■□□□□ 0.6
PDLIM2-202ENST00000308354 PARP12Q9H0J9 701 aaKnown RBP18.81■□□□□ 0.6
PDLIM2-202ENST00000308354 TMED3Q9Y3Q3 217 aa18.81■□□□□ 0.6
PDLIM2-202ENST00000308354 HSPA12AO43301 675 aa18.81■□□□□ 0.6
PDLIM2-202ENST00000308354 CRYZL1O95825 349 aa18.81■□□□□ 0.6
PDLIM2-202ENST00000308354 GLIPR1P48060 266 aa18.81■□□□□ 0.6
PDLIM2-202ENST00000308354 RPL7L1Q6DKI1 246 aaKnown RBP18.81■□□□□ 0.6
PDLIM2-202ENST00000308354 FAM53AQ6NSI3 398 aaPredicted RBP18.81■□□□□ 0.6
PDLIM2-202ENST00000308354 MOB1BQ7L9L4 216 aa18.81■□□□□ 0.6
PDLIM2-202ENST00000308354 LINC01560Q8TB33 94 aa18.81■□□□□ 0.6
PDLIM2-202ENST00000308354 GCM1Q9NP62 436 aa18.81■□□□□ 0.6
PDLIM2-202ENST00000308354 OR2W1Q9Y3N9 320 aa18.81■□□□□ 0.6
PDLIM2-202ENST00000308354 ASCL1P50553 236 aa18.8■□□□□ 0.6
PDLIM2-202ENST00000308354 SRPXP78539 464 aa18.8■□□□□ 0.6
PDLIM2-202ENST00000308354 NEUROG1Q92886 237 aa18.8■□□□□ 0.6
PDLIM2-202ENST00000308354 PKDREJQ9NTG1 2253 aa18.8■□□□□ 0.6
PDLIM2-202ENST00000308354 CCL8P80075 99 aa18.8■□□□□ 0.6
PDLIM2-202ENST00000308354 CMTM1Q8IZ96 169 aa18.8■□□□□ 0.6
PDLIM2-202ENST00000308354 EIF4E3Q8N5X7 224 aaKnown RBP18.8■□□□□ 0.6
PDLIM2-202ENST00000308354 OR10Z1Q8NGY1 313 aa18.8■□□□□ 0.6
PDLIM2-202ENST00000308354 OR1L1Q8NH94 360 aa18.8■□□□□ 0.6
PDLIM2-202ENST00000308354 MRGPRDQ8TDS7 321 aa18.8■□□□□ 0.6
PDLIM2-202ENST00000308354 TMEM56Q96MV1 263 aa18.8■□□□□ 0.6
PDLIM2-202ENST00000308354 TMEM56-RWDD3S4R434 201 aa18.8■□□□□ 0.6
PDLIM2-202ENST00000308354 IFNL4K9M1U5 179 aa18.79■□□□□ 0.6
PDLIM2-202ENST00000308354 CD80P33681 288 aa18.79■□□□□ 0.6
PDLIM2-202ENST00000308354 EDDM3AQ14507 147 aa18.79■□□□□ 0.6
PDLIM2-202ENST00000308354 KRBOX4Q5JUW0 171 aa18.79■□□□□ 0.6
PDLIM2-202ENST00000308354 ZNF695Q8IW36 515 aa18.79■□□□□ 0.6
PDLIM2-202ENST00000308354 FBXL17Q9UF56 701 aa18.79■□□□□ 0.6
PDLIM2-202ENST00000308354 IL19Q9UHD0 177 aa18.79■□□□□ 0.6
PDLIM2-202ENST00000308354 PKD1L2Q7Z442 2459 aa18.79■□□□□ 0.6
PDLIM2-202ENST00000308354 DIDO1Q9BTC0 2240 aaKnown RBP18.79■□□□□ 0.6
PDLIM2-202ENST00000308354 C12orf77C9JDV5 145 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 CYB5R3P00387 301 aaPredicted RBP18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 CFHR2P36980 270 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 ADORA2A-AS1P86434 159 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 HMGN3Q15651 99 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 SLC35E4Q6ICL7 350 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 SELENOHQ8IZQ5 122 aaKnown RBP18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 LILRB1Q8NHL6 650 aaPredicted RBP18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 PLPPR2Q96GM1 343 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 DCTN5Q9BTE1 182 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 DCAF16Q9NXF7 216 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 TAS2R3Q9NYW6 316 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 MED19A0JLT2 244 aaPredicted RBP18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 E5RGE8 158 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 TAAR5O14804 337 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 FGF16O43320 207 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 LHBP01229 141 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 CHRNB4P30926 498 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 CEACAM6P40199 344 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 TMEM33P57088 247 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 TESK1Q15569 626 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 TUSC1Q2TAM9 212 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 CLEC9AQ6UXN8 241 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 ZNRF1Q8ND25 227 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 OR4D5Q8NGN0 318 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 OR1S2Q8NGQ3 325 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 C17orf50Q8WW18 174 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 SMIM3Q9BZL3 60 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 TMA7Q9Y2S6 64 aaKnown RBP18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 NSG2Q9Y328 171 aa18.78■□□□□ 0.6
PDLIM2-202ENST00000308354 PGLYRP1O75594 196 aaPredicted RBP18.77■□□□□ 0.6
PDLIM2-202ENST00000308354 DNTTIP1Q9H147 329 aa18.77■□□□□ 0.6
PDLIM2-202ENST00000308354 KCNIP1Q9NZI2 227 aa18.77■□□□□ 0.6
PDLIM2-202ENST00000308354 ZDHHC8Q9ULC8 765 aa18.77■□□□□ 0.6
PDLIM2-202ENST00000308354 ST8SIA3O43173 380 aa18.77■□□□□ 0.59
PDLIM2-202ENST00000308354 ZNF737O75373 536 aa18.77■□□□□ 0.59
PDLIM2-202ENST00000308354 CDS2O95674 445 aa18.77■□□□□ 0.59
PDLIM2-202ENST00000308354 GATA4P43694 442 aa18.77■□□□□ 0.59
PDLIM2-202ENST00000308354 DEFB108BQ8NET1 73 aa18.77■□□□□ 0.59
PDLIM2-202ENST00000308354 OR13A1Q8NGR1 328 aa18.77■□□□□ 0.59
PDLIM2-202ENST00000308354 ERGIC1Q969X5 290 aa18.77■□□□□ 0.59
PDLIM2-202ENST00000308354 PLEKHA2Q9HB19 425 aa18.77■□□□□ 0.59
PDLIM2-202ENST00000308354 NGBQ9NPG2 151 aa18.77■□□□□ 0.59
PDLIM2-202ENST00000308354 COQ3Q9NZJ6 369 aa18.77■□□□□ 0.59
PDLIM2-202ENST00000308354 SHISA9B4DS77 424 aa18.76■□□□□ 0.59
PDLIM2-202ENST00000308354 KRBOX1C9JBD0 128 aa18.76■□□□□ 0.59
PDLIM2-202ENST00000308354 NPIPB11E5RHQ5 1161 aa18.76■□□□□ 0.59
PDLIM2-202ENST00000308354 UCP1P25874 307 aa18.76■□□□□ 0.59
PDLIM2-202ENST00000308354 SSTR5P35346 364 aa18.76■□□□□ 0.59
PDLIM2-202ENST00000308354 DMRTC2Q8IXT2 367 aaPredicted RBP18.76■□□□□ 0.59
PDLIM2-202ENST00000308354 OR10V1Q8NGI7 309 aa18.76■□□□□ 0.59
PDLIM2-202ENST00000308354 RNF141Q8WVD5 230 aa18.76■□□□□ 0.59
PDLIM2-202ENST00000308354 BSCL2Q96G97 398 aaPredicted RBP18.76■□□□□ 0.59
PDLIM2-202ENST00000308354 ESRP2Q9H6T0 727 aaKnown RBP18.76■□□□□ 0.59
PDLIM2-202ENST00000308354 RBM7Q9Y580 266 aaKnown RBP18.76■□□□□ 0.59
PDLIM2-202ENST00000308354 HEXAP06865 529 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms