RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 MMP7P09237 267 aaPredicted RBP4.61□□□□□ -1.67
USP8-201ENST00000307179 CTRLP40313 264 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 NSDHLQ15738 373 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 PRSS8Q16651 343 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 RABEPKQ7Z6M1 372 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 GCNT2Q8N0V5 402 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 SUMF1Q8NBK3 374 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 OR4F5Q8NH21 305 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 SPPL3Q8TCT6 385 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 FAM216AQ8WUB2 273 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 EXTL1Q92935 676 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 OR4F4Q96R69 305 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 KLHDC3Q9BQ90 382 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 ZNF552Q9H707 407 aaPredicted RBP4.61□□□□□ -1.67
USP8-201ENST00000307179 ST3GAL6Q9Y274 331 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 ATP23Q9Y6H3 246 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 ZNF816-ZNF321PA0A0X1KG74 233 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 A8MXE2 369 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 C9JCJ5 164 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 TCF21O43680 179 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 LILRA1O75019 489 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 ASCL1P50553 236 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 PCBD1P61457 104 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 C21orf62-AS1Q17RA5 79 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 FAM162BQ5T6X4 162 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 FAM27BQ5VT28 67 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 FAM78BQ5VT40 261 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 ZNF818PQ6ZRF7 136 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 SFTPA1Q8IWL2 248 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 GAPTQ8N292 157 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 RPUSD4Q96CM3 377 aaKnown RBP4.61□□□□□ -1.67
USP8-201ENST00000307179 GNB1LQ9BYB4 327 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 ZNF703Q9H7S9 590 aaPredicted RBP4.61□□□□□ -1.67
USP8-201ENST00000307179 ZDHHC11Q9H8X9 412 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 SLC35D1Q9NTN3 355 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 BET1LQ9NYM9 111 aa4.61□□□□□ -1.67
USP8-201ENST00000307179 TRAV30A0A087WSZ9 112 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 J3QR06 171 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 PGLYRP1O75594 196 aaPredicted RBP4.6□□□□□ -1.67
USP8-201ENST00000307179 OR2J2O76002 312 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 EDN3P14138 238 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 CRISP2P16562 243 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 HNRNPA3P51991 378 aaKnown RBP4.6□□□□□ -1.67
USP8-201ENST00000307179 RHOBP62745 196 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 GNB2P62879 340 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.6□□□□□ -1.67
USP8-201ENST00000307179 LSRQ86X29 649 aaPredicted RBP4.6□□□□□ -1.67
USP8-201ENST00000307179 KMT5CQ86Y97 462 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 SIGLECL1Q8N7X8 197 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 ZNF709Q8N972 641 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 OR5T1Q8NG75 326 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 NABP1Q96AH0 204 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 GPR146Q96CH1 333 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 LIN37Q96GY3 246 aaPredicted RBP4.6□□□□□ -1.67
USP8-201ENST00000307179 UBE2ZQ9H832 354 aaPredicted RBP4.6□□□□□ -1.67
USP8-201ENST00000307179 MRPL27Q9P0M9 148 aaKnown RBP4.6□□□□□ -1.67
USP8-201ENST00000307179 OR2W1Q9Y3N9 320 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 CHTOPQ9Y3Y2 248 aaKnown RBP4.6□□□□□ -1.67
USP8-201ENST00000307179 TNRC6AQ8NDV7 1962 aaKnown RBP4.6□□□□□ -1.67
USP8-201ENST00000307179 ADAMTS20P59510 1910 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 TRBV23OR9-2A0A075B6M9 112 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 IGHV1-69-2A0A0G2JMI3 117 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 CD55P08174 381 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 OR5G3P0C626 314 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 OR10J4P0C629 311 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 PTTG1IPP53801 180 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 ARF6P62330 175 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 NRN1LQ496H8 165 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 AARDQ4LEZ3 155 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 RASL11AQ6T310 242 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 Q6ZWC4 215 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 ZNF295-AS1Q8N0V1 137 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 OR2M7Q8NG81 312 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 SFRP2Q96HF1 295 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 KCNS1Q96KK3 526 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 RSG1Q9BU20 258 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 SF3B5Q9BWJ5 86 aaKnown RBP4.6□□□□□ -1.67
USP8-201ENST00000307179 IL36BQ9NZH7 164 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 ARHGEF17Q96PE2 2063 aaPredicted RBP4.6□□□□□ -1.67
USP8-201ENST00000307179 TMEM265A0A087WTH1 108 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 NDUFS8O00217 210 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 DHHO43323 396 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 ZNF253O75346 499 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 HOXB2P14652 356 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 KITLGP21583 273 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 GCH1P30793 250 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 RRADP55042 308 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 FGF12P61328 243 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 TMEM267Q0VDI3 215 aaPredicted RBP4.6□□□□□ -1.67
USP8-201ENST00000307179 Q6ZSR6 202 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 WDR31Q8NA23 367 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 NECAP1Q8NC96 275 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 OR10G9Q8NGN4 311 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 OR10G7Q8NGN6 311 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 SPSB4Q96A44 273 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 ELOVL1Q9BW60 279 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 SOHLH2Q9NX45 425 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 LAMTOR2Q9Y2Q5 125 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 COX11Q9Y6N1 276 aa4.6□□□□□ -1.67
USP8-201ENST00000307179 CEP192Q8TEP8 1941 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms