RNA–Protein interactions for RNA: ENST00000292729.12

USP41-201, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP41, Length 920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-201ENST00000292729 LSAMPQ13449 338 aa7.94□□□□□ -1.14
USP41-201ENST00000292729 ECSCRQ19T08 205 aa7.94□□□□□ -1.14
USP41-201ENST00000292729 TMEM30BQ3MIR4 351 aa7.94□□□□□ -1.14
USP41-201ENST00000292729 KCTD21Q4G0X4 260 aa7.94□□□□□ -1.14
USP41-201ENST00000292729 C19orf54Q5BKX5 351 aa7.94□□□□□ -1.14
USP41-201ENST00000292729 ZNF660Q6AZW8 331 aaPredicted RBP7.94□□□□□ -1.14
USP41-201ENST00000292729 SSX6Q7RTT6 188 aa7.94□□□□□ -1.14
USP41-201ENST00000292729 Q8N402 240 aa7.94□□□□□ -1.14
USP41-201ENST00000292729 ARL11Q969Q4 196 aa7.94□□□□□ -1.14
USP41-201ENST00000292729 RHOVQ96L33 236 aa7.94□□□□□ -1.14
USP41-201ENST00000292729 CNBD2Q96M20 576 aa7.94□□□□□ -1.14
USP41-201ENST00000292729 ZNF251Q9BRH9 671 aa7.94□□□□□ -1.14
USP41-201ENST00000292729 GABARAPL3Q9BY60 117 aa7.94□□□□□ -1.14
USP41-201ENST00000292729 SLA2Q9H6Q3 261 aa7.94□□□□□ -1.14
USP41-201ENST00000292729 RANGRFQ9HD47 186 aaPredicted RBP7.94□□□□□ -1.14
USP41-201ENST00000292729 RAB9BQ9NP90 201 aa7.94□□□□□ -1.14
USP41-201ENST00000292729 BLOC1S6Q9UL45 172 aa7.94□□□□□ -1.14
USP41-201ENST00000292729 MYRFQ9Y2G1 1151 aa7.94□□□□□ -1.14
USP41-201ENST00000292729 TRAV39A0A0B4J263 110 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 TMEM30CPA0ZSE6 113 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 C15orf65H3BRN8 121 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 LANCL1O43813 399 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 PRKYO43930 277 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 CNIH1O95406 144 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 IGHV3-11P01762 117 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 CRISP1P54107 249 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 C5orf64Q2M2E5 130 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 MOGAT2Q3SYC2 334 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 AADACL4Q5VUY2 407 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 STEAP3Q658P3 488 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 CD200R1LQ6Q8B3 271 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 FAM220AQ7Z4H9 259 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 TMEM179BQ7Z7N9 219 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 GID4Q8IVV7 300 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 C8orf59Q8N0T1 100 aaPredicted RBP7.93□□□□□ -1.14
USP41-201ENST00000292729 PXT1Q8NFP0 134 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 NPBQ8NG41 125 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 OR9G4Q8NGQ1 327 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 OR13C9Q8NGT0 318 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 CYGBQ8WWM9 190 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 TBX5Q99593 518 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 NABP2Q9BQ15 211 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 DPCDQ9BVM2 203 aaPredicted RBP7.93□□□□□ -1.14
USP41-201ENST00000292729 MRPS26Q9BYN8 205 aaKnown RBP7.93□□□□□ -1.14
USP41-201ENST00000292729 SIGLEC8Q9NYZ4 499 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 DHDHQ9UQ10 334 aa7.93□□□□□ -1.14
USP41-201ENST00000292729 KIAA1109Q2LD37 5005 aa7.92□□□□□ -1.14
USP41-201ENST00000292729 A0A1W2PQL4 384 aaPredicted RBP7.92□□□□□ -1.14
USP41-201ENST00000292729 MAGEB3O15480 346 aa7.92□□□□□ -1.14
USP41-201ENST00000292729 TPPPO94811 219 aa7.92□□□□□ -1.14
USP41-201ENST00000292729 NDUFA3O95167 84 aa7.92□□□□□ -1.14
USP41-201ENST00000292729 BRI3O95415 125 aa7.92□□□□□ -1.14
USP41-201ENST00000292729 FSTP19883 344 aa7.92□□□□□ -1.14
USP41-201ENST00000292729 TPPP2P59282 170 aa7.92□□□□□ -1.14
USP41-201ENST00000292729 PTGES3Q15185 160 aaKnown RBP7.92□□□□□ -1.14
USP41-201ENST00000292729 KISS1Q15726 138 aa7.92□□□□□ -1.14
USP41-201ENST00000292729 BCDIN3DQ7Z5W3 292 aaKnown RBP7.92□□□□□ -1.14
USP41-201ENST00000292729 LAX1Q8IWV1 398 aa7.92□□□□□ -1.14
USP41-201ENST00000292729 RPP25LQ8N5L8 163 aaKnown RBP7.92□□□□□ -1.14
USP41-201ENST00000292729 ZNF439Q8NDP4 499 aa7.92□□□□□ -1.14
USP41-201ENST00000292729 OR2K2Q8NGT1 345 aa7.92□□□□□ -1.14
USP41-201ENST00000292729 CPNE2Q96FN4 548 aaPredicted RBP7.92□□□□□ -1.14
USP41-201ENST00000292729 IFT22Q9H7X7 185 aa7.92□□□□□ -1.14
USP41-201ENST00000292729 WARS2Q9UGM6 360 aaKnown RBP7.92□□□□□ -1.14
USP41-201ENST00000292729 NUBP2Q9Y5Y2 271 aa7.92□□□□□ -1.14
USP41-201ENST00000292729 DNAH10Q8IVF4 4471 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 IGHV3-43A0A0B4J1X8 118 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 LOC100130705A0A1B0GUX0 176 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 CXorf65A6NEN9 183 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 SLC31A2O15432 143 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 MRPS14O60783 128 aaKnown RBP7.91□□□□□ -1.14
USP41-201ENST00000292729 IGHV3-43DP0DP04 118 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 DAPP51397 102 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 GABARAPL2P60520 117 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 EFNB1P98172 346 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 KLF5Q13887 457 aaPredicted RBP7.91□□□□□ -1.14
USP41-201ENST00000292729 TATDN3Q17R31 274 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 AKIRIN2Q53H80 203 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 ACTBL2Q562R1 376 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 CT45A1Q5HYN5 189 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 RBM48Q5RL73 367 aaKnown RBP7.91□□□□□ -1.14
USP41-201ENST00000292729 ZNF691Q5VV52 312 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 TCEANCQ8N8B7 351 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 SUMF2Q8NBJ7 301 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 OR13C3Q8NGS6 347 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 OR2G2Q8NGZ5 317 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 CT45A3Q8NHU0 189 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 TMEM163Q8TC26 289 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 CASTOR1Q8WTX7 329 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 FBLIM1Q8WUP2 373 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 RGP1Q92546 391 aaPredicted RBP7.91□□□□□ -1.14
USP41-201ENST00000292729 FAM192AQ9GZU8 254 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 PLEKHA3Q9HB20 300 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 ETAA1Q9NY74 926 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 CNOT2Q9NZN8 540 aaKnown RBP7.91□□□□□ -1.14
USP41-201ENST00000292729 NDUFA13Q9P0J0 144 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 GNG8Q9UK08 70 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 KLK5Q9Y337 293 aaPredicted RBP7.91□□□□□ -1.14
USP41-201ENST00000292729 FBXO7Q9Y3I1 522 aa7.91□□□□□ -1.14
USP41-201ENST00000292729 SPINT2O43291 252 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms