RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 ADAM20O43506 726 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 SERPINE2P07093 398 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 GZMHP20718 246 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 TNFSF4P23510 183 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 P2RY1P47900 373 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 CASP6P55212 293 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 ADIPOQQ15848 244 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 CR1LQ2VPA4 569 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 GPR157Q5UAW9 335 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 TRAT1Q6PIZ9 186 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 DRAM1Q8N682 238 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 DMBX1Q8NFW5 382 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 OR51H1Q8NH63 302 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 ANGPTL6Q8NI99 470 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 ERGIC1Q969X5 290 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 DCTN5Q9BTE1 182 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 DNTTIP1Q9H147 329 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 C11orf1Q9H5F2 150 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 RCL1Q9Y2P8 373 aaKnown RBP8.01□□□□□ -1.13
TRIM55-201ENST00000276573 DMXL2Q8TDJ6 3036 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 MFSD2BA6NFX1 497 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 C15orf65H3BRN8 121 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 K7N7A8 449 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 GPR137BO60478 399 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 OR4A8P0C604 315 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 CA7P43166 264 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 NKX2-1P43699 371 aaPredicted RBP8.01□□□□□ -1.13
TRIM55-201ENST00000276573 TMEM33P57088 247 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 ID3Q02535 119 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 CXorf66Q5JRM2 361 aaPredicted RBP8.01□□□□□ -1.13
TRIM55-201ENST00000276573 FAM201AQ5SY85 155 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 RPL7L1Q6DKI1 246 aaKnown RBP8.01□□□□□ -1.13
TRIM55-201ENST00000276573 FAM53AQ6NSI3 398 aaPredicted RBP8.01□□□□□ -1.13
TRIM55-201ENST00000276573 ZBTB34Q8NCN2 500 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 Q8TCH9 128 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 MARVELD3Q96A59 401 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 GPR146Q96CH1 333 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 ABHD14BQ96IU4 210 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 PLEKHF2Q9H8W4 249 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 NGBQ9NPG2 151 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 OR2S2Q9NQN1 319 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 SDHAF2Q9NX18 166 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 PFDN2Q9UHV9 154 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 RNF150Q9ULK6 438 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 KCNS2Q9ULS6 477 aa8.01□□□□□ -1.13
TRIM55-201ENST00000276573 BOD1L1Q8NFC6 3051 aa8□□□□□ -1.13
TRIM55-201ENST00000276573 CADP27708 2225 aa8□□□□□ -1.13
TRIM55-201ENST00000276573 PTPRQQ9UMZ3 2332 aa8□□□□□ -1.13
TRIM55-201ENST00000276573 ODAMA1E959 279 aa8□□□□□ -1.13
TRIM55-201ENST00000276573 I3L521 148 aa8□□□□□ -1.13
TRIM55-201ENST00000276573 ATXN7O15265 892 aaPredicted RBP8□□□□□ -1.13
TRIM55-201ENST00000276573 SPINT2O43291 252 aa8□□□□□ -1.13
TRIM55-201ENST00000276573 FGF16O43320 207 aa8□□□□□ -1.13
TRIM55-201ENST00000276573 IGKV1-39P01597 117 aa8□□□□□ -1.13
TRIM55-201ENST00000276573 IGKV1D-39P04432 117 aa8□□□□□ -1.13
TRIM55-201ENST00000276573 ADH4P08319 380 aa8□□□□□ -1.13
TRIM55-201ENST00000276573 CD80P33681 288 aa8□□□□□ -1.13
TRIM55-201ENST00000276573 EIF5AP63241 154 aaKnown RBP8□□□□□ -1.13
TRIM55-201ENST00000276573 HTD2P86397 168 aa8□□□□□ -1.13
TRIM55-201ENST00000276573 EDDM3AQ14507 147 aa8□□□□□ -1.13
TRIM55-201ENST00000276573 GNMTQ14749 295 aa8□□□□□ -1.13
TRIM55-201ENST00000276573 ZNF585BQ52M93 769 aa8□□□□□ -1.13
TRIM55-201ENST00000276573 THOC7Q6I9Y2 204 aaKnown RBP8□□□□□ -1.13
TRIM55-201ENST00000276573 ZNF645Q8N7E2 425 aa8□□□□□ -1.13
TRIM55-201ENST00000276573 ZNRF1Q8ND25 227 aa8□□□□□ -1.13
TRIM55-201ENST00000276573 ST6GALNAC3Q8NDV1 305 aa8□□□□□ -1.13
TRIM55-201ENST00000276573 RFESDQ8TAC1 157 aa8□□□□□ -1.13
TRIM55-201ENST00000276573 NINJ1Q92982 152 aa8□□□□□ -1.13
TRIM55-201ENST00000276573 BSCL2Q96G97 398 aaPredicted RBP8□□□□□ -1.13
TRIM55-201ENST00000276573 DIRC2Q96SL1 478 aa8□□□□□ -1.13
TRIM55-201ENST00000276573 NCOR1P1Q9H4R4 102 aa8□□□□□ -1.13
TRIM55-201ENST00000276573 SPENQ96T58 3664 aaKnown RBP8□□□□□ -1.13
TRIM55-201ENST00000276573 A0A1B0GU03 582 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 A0A1B0GW55 424 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 RNF212BA8MTL3 300 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 VSTM5A8MXK1 200 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 CYB5R3P00387 301 aaPredicted RBP7.99□□□□□ -1.13
TRIM55-201ENST00000276573 GAPDHP04406 335 aaKnown RBP7.99□□□□□ -1.13
TRIM55-201ENST00000276573 CD55P08174 381 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 DUX4L2P0CJ85 424 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 DUX4L3P0CJ86 424 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 DUX4L4P0CJ87 422 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 DUX4L5P0CJ88 424 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 DUX4L6P0CJ89 424 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 DUX4L7P0CJ90 424 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 SLC25A6P12236 298 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 SSTR5P35346 364 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 PPP1CCP36873 323 aaKnown RBP7.99□□□□□ -1.13
TRIM55-201ENST00000276573 ASCL1P50553 236 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 P2RX3P56373 397 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 POLR2GP62487 172 aaKnown RBP eCLIP7.99□□□□□ -1.13
TRIM55-201ENST00000276573 MSMO1Q15800 293 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 TOR2AQ5JU69 321 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 NCMAPQ5T1S8 102 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 KDF1Q8NAX2 398 aaPredicted RBP7.99□□□□□ -1.13
TRIM55-201ENST00000276573 LRRC20Q8TCA0 184 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 LSM10Q969L4 123 aaKnown RBP7.99□□□□□ -1.13
TRIM55-201ENST00000276573 SDSLQ96GA7 329 aa7.99□□□□□ -1.13
TRIM55-201ENST00000276573 BARX1Q9HBU1 254 aaPredicted RBP7.99□□□□□ -1.13
TRIM55-201ENST00000276573 DUX4Q9UBX2 424 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms