RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 CST9LQ9H4G1 147 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 SLC6A13Q9NSD5 602 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 HCSTQ9UBK5 93 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 SCGB1A1P11684 91 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 OR1D5P58170 312 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 MYBPHQ13203 477 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 TGIF2LYQ8IUE0 185 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 GMPPAQ96IJ6 420 aaPredicted RBP5.03□□□□□ -1.6
VCAN-201ENST00000265077 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.03□□□□□ -1.6
VCAN-201ENST00000265077 ADAMTS9Q9P2N4 1935 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 TLN1Q9Y490 2541 aaKnown RBP5.03□□□□□ -1.6
VCAN-201ENST00000265077 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.03□□□□□ -1.6
VCAN-201ENST00000265077 H3BMH7 237 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 MT-ND6P03923 174 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 MELTFP08582 738 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 VDAC1P21796 283 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 TRAT1Q6PIZ9 186 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 ARHGAP5-AS1Q96IT6 56 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 G6PC2Q9NQR9 355 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 COX11Q9Y6N1 276 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 LRRC37AA6NMS7 1700 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 OBSL1O75147 1896 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 C5orf49A4QMS7 147 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 CDC14BO60729 498 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 CTSDP07339 412 aaPredicted RBP5.03□□□□□ -1.6
VCAN-201ENST00000265077 OR4D9Q8NGE8 314 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 ADAM20O43506 726 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 NEURL1O76050 574 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 MPZP25189 248 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 G6PCP35575 357 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 IER3P46695 156 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 Q8WTZ3 238 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 ALG1L2C9J202 215 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 ERGP11308 486 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 FAHP16930 419 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 FAM71F2Q6NXP2 309 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 SGMS2Q8NHU3 365 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 TMEM106BQ9NUM4 274 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 OR4C45A6NMZ5 311 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 CST7O76096 145 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 LIPFP07098 398 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 PXNP49023 591 aaPredicted RBP5.03□□□□□ -1.6
VCAN-201ENST00000265077 DSCR4P56555 118 aaPredicted RBP5.03□□□□□ -1.6
VCAN-201ENST00000265077 ZFAND6Q6FIF0 208 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 PNKDQ8N490 385 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 NOXO1Q8NFA2 376 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 MRGPRX3Q96LB0 322 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 FAM117AQ9C073 453 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 DHHO43323 396 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 C1QAP02745 245 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 SLC38A11Q08AI6 406 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 PWWP2BQ6NUJ5 590 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 PLSCR4Q9NRQ2 329 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 SLC45A2Q9UMX9 530 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 KLF13Q9Y2Y9 288 aaPredicted RBP5.03□□□□□ -1.6
VCAN-201ENST00000265077 GNG4P50150 75 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 BHLHE23Q8NDY6 225 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 RNASEH2CQ8TDP1 164 aaKnown RBP5.03□□□□□ -1.6
VCAN-201ENST00000265077 CSTL1Q9H114 145 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 A0A1W2PNR3 127 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 DPRXA6NFQ7 191 aa5.03□□□□□ -1.6
VCAN-201ENST00000265077 WDR25Q64LD2 544 aaPredicted RBP5.03□□□□□ -1.6
VCAN-201ENST00000265077 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 TIAL1Q01085 375 aaKnown RBP eCLIP5.02□□□□□ -1.61
VCAN-201ENST00000265077 RNPS1Q15287 305 aaKnown RBP5.02□□□□□ -1.61
VCAN-201ENST00000265077 MMDQ15546 238 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 KTI12Q96EK9 354 aaPredicted RBP5.02□□□□□ -1.61
VCAN-201ENST00000265077 TMEM147Q9BVK8 224 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 AAMDCQ9H7C9 122 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 KCNE3Q9Y6H6 103 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 TRGV10A0A0A0MS01 117 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 GAGE12BA1L429 117 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 PNLIPP16233 465 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 PGFP49763 221 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 Q1RN00 199 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 PRICKLE4Q2TBC4 344 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 TMEM144Q7Z5S9 345 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 C17orf47Q8NEP4 570 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 OR10AG1Q8NH19 301 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 RPS4Y2Q8TD47 263 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 RAB37Q96AX2 223 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 BARX1Q9HBU1 254 aaPredicted RBP5.02□□□□□ -1.61
VCAN-201ENST00000265077 LRRC3CA6NJW4 275 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 DANCRP0C864 163 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 PF4V1P10720 104 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 ZNF718Q3SXZ3 478 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 DNASE2BQ8WZ79 361 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 SH2D2AQ9NP31 389 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 VSIG4Q9Y279 399 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 OR5AL1P0C617 328 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 GZMBP10144 247 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 GNG3P63215 75 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 ANKRD33Q7Z3H0 272 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 AQP10Q96PS8 301 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 TSPAN32Q96QS1 320 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 TMEM204Q9BSN7 226 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 MRPS18AQ9NVS2 196 aaKnown RBP5.02□□□□□ -1.61
VCAN-201ENST00000265077 LMO7DNF2Z398 122 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 SSPNQ14714 243 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 ZNF683Q8IZ20 524 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms