RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 FOXL2P58012 376 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 RANP62826 216 aaKnown RBP10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 WDR74Q6RFH5 385 aaPredicted RBP10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 ZIC4Q8N9L1 334 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 OR10J5Q8NHC4 309 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 NEIL1Q96FI4 390 aaPredicted RBP10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 IGHV3-15A0A0B4J1V0 119 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 A0A0G2JRQ6 117 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 DLEU1O43261 78 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 MMP7P09237 267 aaPredicted RBP10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 PSG2P11465 335 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 DSCR4P56555 118 aaPredicted RBP10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 RAET1LQ5VY80 246 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 LINC00596Q86U02 117 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 CALHM1Q8IU99 346 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 MKXQ8IYA7 352 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 OR4F5Q8NH21 305 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 CLDN23Q96B33 292 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 MS4A10Q96PG2 267 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 OR4F4Q96R69 305 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 UCN2Q96RP3 112 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 GPHA2Q96T91 129 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 TRAPPC1Q9Y5R8 145 aa10.58□□□□□ -0.72
CHMP2B-201ENST00000263780 TRBV6-6A0A0A6YYG2 114 aa10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 TNFSF11O14788 317 aa10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 DKK1O94907 266 aa10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 PDGFBP01127 241 aaPredicted RBP10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 OR3A1P47881 315 aa10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 SLC38A11Q08AI6 406 aa10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 ARL16Q0P5N6 197 aa10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 RPP25LQ8N5L8 163 aaKnown RBP10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 OR51H1Q8NH63 302 aa10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 SPSB4Q96A44 273 aa10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 POLR3KQ9Y2Y1 108 aaPredicted RBP10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 CHCHD2Q9Y6H1 151 aaPredicted RBP10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 GLB1P16278 677 aa10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 BCL3P20749 454 aa10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 PSG4Q00888 419 aa10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 HYAL1Q12794 435 aa10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 DAZAP2Q15038 168 aaPredicted RBP10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 TESK1Q15569 626 aa10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 ZNF324BQ6AW86 544 aaPredicted RBP10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 ZNF837Q96EG3 531 aaPredicted RBP10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 ELOVL1Q9BW60 279 aa10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 REPIN1Q9BWE0 567 aaKnown RBP10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 OR2H1Q9GZK4 316 aa10.57□□□□□ -0.72
CHMP2B-201ENST00000263780 IGKV1-6A0A0C4DH72 117 aa10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 ZNF705FA8MVS1 300 aaPredicted RBP10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 TRAPPC2LH3BP13 241 aa10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 TOX3O15405 576 aaPredicted RBP10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 CYC1P08574 325 aa10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 ZNF705DP0CH99 300 aaPredicted RBP10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 ZNF705BP0CI00 300 aaPredicted RBP10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 LBX1P52954 281 aa10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 UBE2NP61088 152 aaKnown RBP10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 PPP1CBP62140 327 aa10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 GNB2P62879 340 aa10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 RAC1P63000 192 aa10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 PAFAH1B2P68402 229 aa10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 TRIM61Q5EBN2 209 aa10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 SPANXN5Q5MJ07 72 aa10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 PRAMEF20Q5VT98 475 aa10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 ZNF705AQ6ZN79 300 aaPredicted RBP10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 TMEM208Q9BTX3 173 aa10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 LIN7CQ9NUP9 197 aaKnown RBP10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 PCDH15Q96QU1 1955 aa10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 UBE2L5PA0A1B0GUS4 154 aa10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 COX5AP20674 150 aa10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 PRSS12P56730 875 aa10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 PCSK4Q6UW60 755 aa10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 HAPLN4Q86UW8 402 aa10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 OR10V1Q8NGI7 309 aa10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 ZCCHC14Q8WYQ9 949 aaKnown RBP10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 WDYHV1Q96HA8 205 aa10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 C20orf144Q9BQM9 153 aa10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 PRDM14Q9GZV8 571 aa10.56□□□□□ -0.72
CHMP2B-201ENST00000263780 IGHV1OR15-9A0A0B4J2B8 117 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 HPRT1P00492 218 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 FOXL1Q12952 345 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 CLEC12BQ2HXU8 276 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 Q6ZRM9 215 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 OR10G9Q8NGN4 311 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 OR10G7Q8NGN6 311 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 RLN3Q8WXF3 142 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 MIEN1Q9BRT3 115 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 C1QTNF5Q9BXJ0 243 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 WNT5BQ9H1J7 359 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 TMEM9BQ9NQ34 198 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 ERRFI1Q9UJM3 462 aaPredicted RBP10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 PXMP4Q9Y6I8 212 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 A0A0U1RQK1 487 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 ZNF320A2RRD8 509 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 DEGS1O15121 323 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 PDE6DO43924 150 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 LIFP15018 202 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 RPL29P47914 159 aaKnown RBP10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 RAC3P60763 192 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 RPL15P61313 204 aaKnown RBP10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 RTP5Q14D33 572 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms