RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 RAB18Q9NP72 206 aa11.49□□□□□ -0.57
VMP1-201ENST00000262291 SLC25A15Q9Y619 301 aa11.49□□□□□ -0.57
VMP1-201ENST00000262291 LRP5LA4QPB2 252 aa11.49□□□□□ -0.57
VMP1-201ENST00000262291 IFITM10A6NMD0 228 aa11.49□□□□□ -0.57
VMP1-201ENST00000262291 SLC31A2O15432 143 aa11.49□□□□□ -0.57
VMP1-201ENST00000262291 PHF1O43189 567 aaPredicted RBP11.49□□□□□ -0.57
VMP1-201ENST00000262291 CRYABP02511 175 aaKnown RBP11.49□□□□□ -0.57
VMP1-201ENST00000262291 RAB5AP20339 215 aa11.49□□□□□ -0.57
VMP1-201ENST00000262291 SURF2Q15527 256 aaPredicted RBP11.49□□□□□ -0.57
VMP1-201ENST00000262291 GGNBP1Q5YKI7 109 aa11.49□□□□□ -0.57
VMP1-201ENST00000262291 FAM53AQ6NSI3 398 aaPredicted RBP11.49□□□□□ -0.57
VMP1-201ENST00000262291 Q6P435 159 aa11.49□□□□□ -0.57
VMP1-201ENST00000262291 LYZL2Q7Z4W2 148 aa11.49□□□□□ -0.57
VMP1-201ENST00000262291 MOB3AQ96BX8 217 aa11.49□□□□□ -0.57
VMP1-201ENST00000262291 SUCNR1Q9BXA5 334 aa11.49□□□□□ -0.57
VMP1-201ENST00000262291 PKIBQ9C010 78 aa11.49□□□□□ -0.57
VMP1-201ENST00000262291 WASF3Q9UPY6 502 aa11.49□□□□□ -0.57
VMP1-201ENST00000262291 PLCE1Q9P212 2302 aa11.48□□□□□ -0.57
VMP1-201ENST00000262291 CHD3Q12873 2000 aaKnown RBP11.48□□□□□ -0.57
VMP1-201ENST00000262291 GFRA3O60609 400 aa11.48□□□□□ -0.57
VMP1-201ENST00000262291 CNOT4O95628 575 aaKnown RBP11.48□□□□□ -0.57
VMP1-201ENST00000262291 FAM157CP0CG43 387 aa11.48□□□□□ -0.57
VMP1-201ENST00000262291 TBR1Q16650 682 aa11.48□□□□□ -0.57
VMP1-201ENST00000262291 AWAT1Q58HT5 328 aa11.48□□□□□ -0.57
VMP1-201ENST00000262291 SPRNQ5BIV9 151 aa11.48□□□□□ -0.57
VMP1-201ENST00000262291 CLEC9AQ6UXN8 241 aa11.48□□□□□ -0.57
VMP1-201ENST00000262291 Q8NA96 180 aa11.48□□□□□ -0.57
VMP1-201ENST00000262291 KIRREL1Q96J84 757 aa11.48□□□□□ -0.57
VMP1-201ENST00000262291 TP53RKQ96S44 253 aa11.48□□□□□ -0.57
VMP1-201ENST00000262291 SYT3Q9BQG1 590 aa11.48□□□□□ -0.57
VMP1-201ENST00000262291 NAA60Q9H7X0 242 aa11.48□□□□□ -0.57
VMP1-201ENST00000262291 PROB1E7EW31 1015 aa11.48□□□□□ -0.57
VMP1-201ENST00000262291 SLC25A4P12235 298 aa11.48□□□□□ -0.57
VMP1-201ENST00000262291 POC1AQ8NBT0 407 aa11.48□□□□□ -0.57
VMP1-201ENST00000262291 C1orf162Q8NEQ5 155 aaPredicted RBP11.48□□□□□ -0.57
VMP1-201ENST00000262291 OR8G5Q8NG78 346 aa11.48□□□□□ -0.57
VMP1-201ENST00000262291 OR1A1Q9P1Q5 309 aa11.48□□□□□ -0.57
VMP1-201ENST00000262291 ATRXP46100 2492 aa11.48□□□□□ -0.57
VMP1-201ENST00000262291 FAM90A10PA6NDY2 464 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 FAM90A18PA6NE21 464 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 FAM90A16PA6NEW6 464 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 FAM90A20PA6NIJ5 464 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 FAM90A8PA6NJQ4 464 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 FAM90A7PA6NKC0 464 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 FAM90A22PA8MWA6 464 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 FAM90A12PA8MX19 464 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 FAM90A5PA8MXJ8 464 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 FAM90A23PA8MXZ1 464 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 TRDCB7Z8K6 153 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 H7C1Q1 480 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 SLC33A1O00400 549 aaPredicted RBP11.47□□□□□ -0.57
VMP1-201ENST00000262291 FAM90A15PP0C7V4 464 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 FAM90A13PP0C7W8 464 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 FAM90A14PP0C7W9 464 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 FAM90A24PP0C7X0 464 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 GCH1P30793 250 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 GNRHRP30968 328 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 LPAR6P43657 344 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 NAAAQ02083 359 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 NHLH1Q02575 133 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 P2RY6Q15077 328 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 C11orf53Q8IXP5 236 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 OR2Z1Q8NG97 314 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 C2orf50Q96LR7 162 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 NMES1Q9C002 83 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 CCL28Q9NRJ3 127 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 C1orf123Q9NWV4 160 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 LSM5Q9Y4Y9 91 aaKnown RBP11.47□□□□□ -0.57
VMP1-201ENST00000262291 KALRNO60229 2985 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 A0A1W2PPE2 198 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 C7orf77A4D0Y5 90 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 DIRAS3O95661 229 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 IGLV1-44P01699 117 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 TK1P04183 234 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 CAV2P51636 162 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 TMEM187Q14656 261 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 ZNF818PQ6ZRF7 136 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 GAPTQ8N292 157 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 TPRX1Q8N7U7 411 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 FAM57AQ8TBR7 257 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 LURAP1Q96LR2 239 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 SLC5A7Q9GZV3 580 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 PRDM13Q9H4Q3 707 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 DECR2Q9NUI1 292 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 LPAR3Q9UBY5 353 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 CACFD1Q9UGQ2 172 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 METRNQ9UJH8 293 aa11.47□□□□□ -0.57
VMP1-201ENST00000262291 DIDO1Q9BTC0 2240 aaKnown RBP11.47□□□□□ -0.57
VMP1-201ENST00000262291 MED6O75586 246 aa11.46□□□□□ -0.57
VMP1-201ENST00000262291 PGA5P0DJD9 388 aa11.46□□□□□ -0.57
VMP1-201ENST00000262291 TAS2R60P59551 318 aa11.46□□□□□ -0.57
VMP1-201ENST00000262291 ZNF718Q3SXZ3 478 aa11.46□□□□□ -0.57
VMP1-201ENST00000262291 DOLPP1Q86YN1 238 aa11.46□□□□□ -0.57
VMP1-201ENST00000262291 MISP3Q96FF7 219 aa11.46□□□□□ -0.57
VMP1-201ENST00000262291 PSPNO60542 156 aa11.46□□□□□ -0.58
VMP1-201ENST00000262291 NXPH3O95157 252 aa11.46□□□□□ -0.58
VMP1-201ENST00000262291 NDUFA6P56556 154 aa11.46□□□□□ -0.58
VMP1-201ENST00000262291 GAMTQ14353 236 aa11.46□□□□□ -0.58
VMP1-201ENST00000262291 IL34Q6ZMJ4 242 aa11.46□□□□□ -0.58
VMP1-201ENST00000262291 OR10D4PQ8NGN7 298 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms