RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 RUNX1Q01196 453 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 IQCJQ1A5X6 159 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 SNAI3Q3KNW1 292 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 NMSQ5H8A3 153 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 DMRTC1Q5HYR2 192 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 CXorf66Q5JRM2 361 aaPredicted RBP9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 TMEM42Q69YG0 159 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 ZNF787Q6DD87 383 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 DHRS13Q6UX07 377 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 MRGPRGQ86SM5 289 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 TMEM170AQ8WVE7 144 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 ZNF845Q96IR2 970 aaPredicted RBP9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 SIGLEC12Q96PQ1 595 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 PSMG3Q9BT73 122 aaPredicted RBP9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 WNT5BQ9H1J7 359 aa9.24□□□□□ -0.93
CHRNA1-201ENST00000261007 ZNF705GA8MUZ8 300 aaPredicted RBP9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 M0QZK8 103 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 EREGO14944 169 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 GGCTO75223 188 aaKnown RBP9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 CST7O76096 145 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 SP1P08047 785 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 METTL15P1P0C7V9 234 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 CD46P15529 392 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 NTF4P34130 210 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 CASP6P55212 293 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 FAM3BP58499 235 aaPredicted RBP9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 ERVFC1-1P60608 527 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 CLN3Q13286 438 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 SRSF7Q16629 238 aaKnown RBP eCLIP9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 Q6ZS49 121 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 PLPPR1Q8TBJ4 325 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 ABHD3Q8WU67 409 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 SPSB4Q96A44 273 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 BORCS8Q96FH0 119 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 NCKAP5O14513 1909 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 ZDBF2Q9HCK1 2354 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 hCG_38984A0A1B0GV85 526 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 FAM221AA4D161 298 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 ADAM20O43506 726 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 PDCD6O75340 191 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 TMEM50AO95807 157 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 NRASP01111 189 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 MMP7P09237 267 aaPredicted RBP9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 SLC25A6P12236 298 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 GNRHRP30968 328 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 APLNRP35414 380 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 FUT6P51993 359 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 ZNF154Q13106 437 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 ACOT6Q3I5F7 207 aaPredicted RBP9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 WDR25Q64LD2 544 aaPredicted RBP9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 ZNF880Q6PDB4 577 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 CYP2G1PQ6ZSU1 146 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 TBC1D26Q86UD7 250 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 THNSL2Q86YJ6 484 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 OSR2Q8N2R0 312 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 TMEM251Q8N6I4 163 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 SUMF1Q8NBK3 374 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 NAXEQ8NCW5 288 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 MDS2Q8NDY4 140 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 C1QTNF5Q9BXJ0 243 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 SNHG12Q9BXW3 62 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 PRRG4Q9BZD6 226 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 MAGT1Q9H0U3 335 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 Q9N2K0 584 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 GPR173Q9NS66 373 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 CBY1Q9Y3M2 126 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 RNF115Q9Y4L5 304 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 R4GN57 208 aa9.23□□□□□ -0.93
CHRNA1-201ENST00000261007 DOCK10Q96BY6 2186 aa9.22□□□□□ -0.93
CHRNA1-201ENST00000261007 ZNF816-ZNF321PA0A0X1KG74 233 aa9.22□□□□□ -0.93
CHRNA1-201ENST00000261007 ZFP92A6NM28 416 aa9.22□□□□□ -0.93
CHRNA1-201ENST00000261007 HAX1O00165 279 aa9.22□□□□□ -0.93
CHRNA1-201ENST00000261007 ATXN7O15265 892 aaPredicted RBP9.22□□□□□ -0.93
CHRNA1-201ENST00000261007 CHST1O43916 411 aa9.22□□□□□ -0.93
CHRNA1-201ENST00000261007 ZNF205O95201 554 aa9.22□□□□□ -0.93
CHRNA1-201ENST00000261007 PAX9P55771 341 aa9.22□□□□□ -0.93
CHRNA1-201ENST00000261007 SOX8P57073 446 aa9.22□□□□□ -0.93
CHRNA1-201ENST00000261007 SERF2P84101 59 aa9.22□□□□□ -0.93
CHRNA1-201ENST00000261007 MALLQ13021 153 aa9.22□□□□□ -0.93
CHRNA1-201ENST00000261007 PRDX4Q13162 271 aa9.22□□□□□ -0.93
CHRNA1-201ENST00000261007 TMEM241Q24JQ0 296 aa9.22□□□□□ -0.93
CHRNA1-201ENST00000261007 MPV17LQ2QL34 196 aa9.22□□□□□ -0.93
CHRNA1-201ENST00000261007 MCEMP1Q8IX19 187 aa9.22□□□□□ -0.93
CHRNA1-201ENST00000261007 TMEM217Q8N7C4 229 aa9.22□□□□□ -0.93
CHRNA1-201ENST00000261007 OR51G1Q8NGK1 321 aa9.22□□□□□ -0.93
CHRNA1-201ENST00000261007 SCGB1C1Q8TD33 95 aa9.22□□□□□ -0.93
CHRNA1-201ENST00000261007 OR5B12Q96R08 314 aa9.22□□□□□ -0.93
CHRNA1-201ENST00000261007 GP6Q9HCN6 339 aa9.22□□□□□ -0.93
CHRNA1-201ENST00000261007 RPRMQ9NS64 109 aa9.22□□□□□ -0.93
CHRNA1-201ENST00000261007 PRSS50Q9UI38 385 aa9.22□□□□□ -0.93
CHRNA1-201ENST00000261007 KMT2EQ8IZD2 1858 aa9.21□□□□□ -0.93
CHRNA1-201ENST00000261007 GALR2O43603 387 aaPredicted RBP9.21□□□□□ -0.93
CHRNA1-201ENST00000261007 ANGPTL7O43827 346 aa9.21□□□□□ -0.93
CHRNA1-201ENST00000261007 ARR3P36575 388 aa9.21□□□□□ -0.93
CHRNA1-201ENST00000261007 MEOX1P50221 254 aa9.21□□□□□ -0.93
CHRNA1-201ENST00000261007 TDGF1P3P51864 188 aa9.21□□□□□ -0.93
CHRNA1-201ENST00000261007 PAX5Q02548 391 aa9.21□□□□□ -0.93
CHRNA1-201ENST00000261007 GAGE1Q13065 139 aa9.21□□□□□ -0.93
CHRNA1-201ENST00000261007 TRIP6Q15654 476 aaKnown RBP9.21□□□□□ -0.93
CHRNA1-201ENST00000261007 C1orf194Q5T5A4 169 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms