RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 C8orf31Q8N9H6 132 aa16.83■□□□□ 0.28
HCFC1R1-201ENST00000248089 PLXNB1O43157 2135 aa16.82■□□□□ 0.28
HCFC1R1-201ENST00000248089 A0A1W2PRX2 142 aa16.82■□□□□ 0.28
HCFC1R1-201ENST00000248089 ZNF367Q7RTV3 350 aa16.82■□□□□ 0.28
HCFC1R1-201ENST00000248089 RTN4IP1Q8WWV3 396 aaPredicted RBP16.82■□□□□ 0.28
HCFC1R1-201ENST00000248089 GFI1Q99684 422 aa16.82■□□□□ 0.28
HCFC1R1-201ENST00000248089 FAAP24Q9BTP7 215 aa16.82■□□□□ 0.28
HCFC1R1-201ENST00000248089 OR2S2Q9NQN1 319 aa16.82■□□□□ 0.28
HCFC1R1-201ENST00000248089 MBNL3Q9NUK0 354 aaKnown RBP16.82■□□□□ 0.28
HCFC1R1-201ENST00000248089 TMEM14DPA8MWL7 114 aa16.81■□□□□ 0.28
HCFC1R1-201ENST00000248089 ARSBP15848 533 aa16.81■□□□□ 0.28
HCFC1R1-201ENST00000248089 BLVRBP30043 206 aaPredicted RBP16.81■□□□□ 0.28
HCFC1R1-201ENST00000248089 GNMTQ14749 295 aa16.81■□□□□ 0.28
HCFC1R1-201ENST00000248089 RAB11BQ15907 218 aa16.81■□□□□ 0.28
HCFC1R1-201ENST00000248089 Q3ZCU0 254 aa16.81■□□□□ 0.28
HCFC1R1-201ENST00000248089 SLC25A48Q6ZT89 311 aaKnown RBP16.81■□□□□ 0.28
HCFC1R1-201ENST00000248089 C5orf24Q7Z6I8 188 aa16.81■□□□□ 0.28
HCFC1R1-201ENST00000248089 C5orf56Q8N8D9 126 aa16.81■□□□□ 0.28
HCFC1R1-201ENST00000248089 ZNF439Q8NDP4 499 aa16.81■□□□□ 0.28
HCFC1R1-201ENST00000248089 R3HDM4Q96D70 268 aa16.81■□□□□ 0.28
HCFC1R1-201ENST00000248089 TM2D1Q9BX74 207 aa16.81■□□□□ 0.28
HCFC1R1-201ENST00000248089 CHMP1AQ9HD42 196 aaPredicted RBP16.81■□□□□ 0.28
HCFC1R1-201ENST00000248089 A0A0A6YYD4 124 aa16.8■□□□□ 0.28
HCFC1R1-201ENST00000248089 SLC17A2O00624 439 aa16.8■□□□□ 0.28
HCFC1R1-201ENST00000248089 OPN1MWP04001 364 aa16.8■□□□□ 0.28
HCFC1R1-201ENST00000248089 OPN1MW2P0DN77 364 aa16.8■□□□□ 0.28
HCFC1R1-201ENST00000248089 OPN1MW3P0DN78 364 aa16.8■□□□□ 0.28
HCFC1R1-201ENST00000248089 ZNF134P52741 427 aa16.8■□□□□ 0.28
HCFC1R1-201ENST00000248089 QRFPP83859 136 aa16.8■□□□□ 0.28
HCFC1R1-201ENST00000248089 EMX1Q04741 257 aaPredicted RBP16.8■□□□□ 0.28
HCFC1R1-201ENST00000248089 CT45A1Q5HYN5 189 aa16.8■□□□□ 0.28
HCFC1R1-201ENST00000248089 OR52L2PQ8NGH6 319 aa16.8■□□□□ 0.28
HCFC1R1-201ENST00000248089 CT45A3Q8NHU0 189 aa16.8■□□□□ 0.28
HCFC1R1-201ENST00000248089 SETD6Q8TBK2 473 aa16.8■□□□□ 0.28
HCFC1R1-201ENST00000248089 ACOT13Q9NPJ3 140 aa16.8■□□□□ 0.28
HCFC1R1-201ENST00000248089 ADARB2-AS1A8MUL3 147 aa16.79■□□□□ 0.28
HCFC1R1-201ENST00000248089 CD37P11049 281 aa16.79■□□□□ 0.28
HCFC1R1-201ENST00000248089 PPP1CCP36873 323 aaKnown RBP16.79■□□□□ 0.28
HCFC1R1-201ENST00000248089 CLDN12P56749 244 aa16.79■□□□□ 0.28
HCFC1R1-201ENST00000248089 SSX1Q16384 188 aa16.79■□□□□ 0.28
HCFC1R1-201ENST00000248089 KHDC1LQ5JSQ8 128 aa16.79■□□□□ 0.28
HCFC1R1-201ENST00000248089 C10orf99Q6UWK7 81 aa16.79■□□□□ 0.28
HCFC1R1-201ENST00000248089 TGIF2LXQ8IUE1 241 aa16.79■□□□□ 0.28
HCFC1R1-201ENST00000248089 IZUMO1Q8IYV9 350 aa16.79■□□□□ 0.28
HCFC1R1-201ENST00000248089 OR4F17Q8NGA8 305 aa16.79■□□□□ 0.28
HCFC1R1-201ENST00000248089 OR4X2Q8NGF9 303 aa16.79■□□□□ 0.28
HCFC1R1-201ENST00000248089 ST6GALNAC6Q969X2 333 aa16.79■□□□□ 0.28
HCFC1R1-201ENST00000248089 OR4F4Q96R69 305 aa16.79■□□□□ 0.28
HCFC1R1-201ENST00000248089 URM1Q9BTM9 101 aaKnown RBP16.79■□□□□ 0.28
HCFC1R1-201ENST00000248089 PLEKHJ1Q9NW61 149 aa16.79■□□□□ 0.28
HCFC1R1-201ENST00000248089 NCBP2LA6PVI3 153 aaKnown RBP16.78■□□□□ 0.28
HCFC1R1-201ENST00000248089 FGF16O43320 207 aa16.78■□□□□ 0.28
HCFC1R1-201ENST00000248089 TXNL1O43396 289 aa16.78■□□□□ 0.28
HCFC1R1-201ENST00000248089 MORN2Q502X0 79 aa16.78■□□□□ 0.28
HCFC1R1-201ENST00000248089 OR2W3Q7Z3T1 314 aa16.78■□□□□ 0.28
HCFC1R1-201ENST00000248089 ZNF554Q86TJ5 538 aa16.78■□□□□ 0.28
HCFC1R1-201ENST00000248089 OR2T10Q8NGZ9 312 aa16.78■□□□□ 0.28
HCFC1R1-201ENST00000248089 EAF1Q96JC9 268 aaPredicted RBP16.78■□□□□ 0.28
HCFC1R1-201ENST00000248089 ABHD14AQ9BUJ0 271 aa16.78■□□□□ 0.28
HCFC1R1-201ENST00000248089 LPAR5Q9H1C0 372 aa16.78■□□□□ 0.28
HCFC1R1-201ENST00000248089 ABRACLQ9P1F3 81 aa16.78■□□□□ 0.28
HCFC1R1-201ENST00000248089 JPT1Q9UK76 154 aa16.78■□□□□ 0.28
HCFC1R1-201ENST00000248089 TCRBV4S1A1TA0A5B7 111 aa16.77■□□□□ 0.28
HCFC1R1-201ENST00000248089 SOCS1O15524 211 aa16.77■□□□□ 0.28
HCFC1R1-201ENST00000248089 GABARAPL2P60520 117 aa16.77■□□□□ 0.28
HCFC1R1-201ENST00000248089 CD83Q01151 205 aa16.77■□□□□ 0.28
HCFC1R1-201ENST00000248089 HMGN3Q15651 99 aa16.77■□□□□ 0.28
HCFC1R1-201ENST00000248089 PDLIM3Q53GG5 364 aaPredicted RBP16.77■□□□□ 0.28
HCFC1R1-201ENST00000248089 TCTEX1D4Q5JR98 221 aa16.77■□□□□ 0.28
HCFC1R1-201ENST00000248089 HES5Q5TA89 166 aa16.77■□□□□ 0.28
HCFC1R1-201ENST00000248089 SVOPQ8N4V2 548 aa16.77■□□□□ 0.28
HCFC1R1-201ENST00000248089 OR51D1Q8NGF3 324 aa16.77■□□□□ 0.28
HCFC1R1-201ENST00000248089 IL1F10Q8WWZ1 152 aa16.77■□□□□ 0.28
HCFC1R1-201ENST00000248089 GALMQ96C23 342 aa16.77■□□□□ 0.28
HCFC1R1-201ENST00000248089 Q9H521 79 aa16.77■□□□□ 0.28
HCFC1R1-201ENST00000248089 V9GY05 133 aa16.77■□□□□ 0.28
HCFC1R1-201ENST00000248089 ZNF736B4DX44 427 aaPredicted RBP16.76■□□□□ 0.27
HCFC1R1-201ENST00000248089 G3V4G9 280 aa16.76■□□□□ 0.27
HCFC1R1-201ENST00000248089 ZNF137PP52743 207 aa16.76■□□□□ 0.27
HCFC1R1-201ENST00000248089 HTD2P86397 168 aa16.76■□□□□ 0.27
HCFC1R1-201ENST00000248089 EBI3Q14213 229 aa16.76■□□□□ 0.27
HCFC1R1-201ENST00000248089 FAM3DQ96BQ1 224 aa16.76■□□□□ 0.27
HCFC1R1-201ENST00000248089 RBMXL1Q96E39 390 aaKnown RBP16.76■□□□□ 0.27
HCFC1R1-201ENST00000248089 NDUFB11Q9NX14 153 aa16.76■□□□□ 0.27
HCFC1R1-201ENST00000248089 PSMB11A5LHX3 300 aa16.75■□□□□ 0.27
HCFC1R1-201ENST00000248089 SERPINE3A8MV23 424 aa16.75■□□□□ 0.27
HCFC1R1-201ENST00000248089 RGS11O94810 467 aa16.75■□□□□ 0.27
HCFC1R1-201ENST00000248089 PF4V1P10720 104 aa16.75■□□□□ 0.27
HCFC1R1-201ENST00000248089 MYL9P24844 172 aa16.75■□□□□ 0.27
HCFC1R1-201ENST00000248089 CD1BP29016 333 aa16.75■□□□□ 0.27
HCFC1R1-201ENST00000248089 VEGFCP49767 419 aa16.75■□□□□ 0.27
HCFC1R1-201ENST00000248089 Q6ZPA2 131 aa16.75■□□□□ 0.27
HCFC1R1-201ENST00000248089 SLC35E3Q7Z769 313 aa16.75■□□□□ 0.27
HCFC1R1-201ENST00000248089 ZNF329Q86UD4 541 aa16.75■□□□□ 0.27
HCFC1R1-201ENST00000248089 NOL4LQ96MY1 436 aaPredicted RBP16.75■□□□□ 0.27
HCFC1R1-201ENST00000248089 HDHD3Q9BSH5 251 aaPredicted RBP16.75■□□□□ 0.27
HCFC1R1-201ENST00000248089 AK3Q9UIJ7 227 aa16.75■□□□□ 0.27
HCFC1R1-201ENST00000248089 LINC00527Q9UJ94 153 aa16.75■□□□□ 0.27
HCFC1R1-201ENST00000248089 TSSC4Q9Y5U2 329 aaPredicted RBP16.75■□□□□ 0.27
HCFC1R1-201ENST00000248089 PDCD5O14737 125 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms