RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 RDH5Q92781 318 aa13.05□□□□□ -0.32
TGFB1-201ENST00000221930 IGKV3D-15A0A087WSY6 115 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 LNP1A1A4G5 178 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 ZNF724A8MTY0 619 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 UMAD1C9J7I0 102 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 PROB1E7EW31 1015 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 CDS2O95674 445 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 TMEM50AO95807 157 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 CD59P13987 128 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 CCL20P78556 96 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 VASH2Q86V25 355 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 ZNF664Q8N3J9 261 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 TMEM56Q96MV1 263 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 FAM173AQ9BQD7 235 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 FOXJ2Q9P0K8 574 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 TMEM56-RWDD3S4R434 201 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 PHOX2AO14813 284 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 ATP6V0CP27449 155 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 IL2RGP31785 369 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 UCP2P55851 309 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 ABHD17BQ5VST6 288 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 OR5C1Q8NGR4 320 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 OR2G3Q8NGZ4 309 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 C11orf1Q9H5F2 150 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 PARD6AQ9NPB6 346 aa13.04□□□□□ -0.32
TGFB1-201ENST00000221930 C9orf172C9J069 976 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 ARG1P05089 322 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 NRN1LQ496H8 165 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 DMRTA1Q5VZB9 504 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 TMEM252Q8N6L7 170 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 SLC24A4Q8NFF2 622 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 APOBEC3DQ96AK3 386 aaPredicted RBP13.03□□□□□ -0.32
TGFB1-201ENST00000221930 ESPL1Q14674 2120 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 OR1C1Q15619 314 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 MKXQ8IYA7 352 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 FAM185AQ8N0U4 392 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 OR10A7Q8NGE5 316 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 TTTY12Q9BZ98 90 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 OR14J1Q9UGF5 321 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 HSBP1L1C9JCN9 74 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 K7N7A8 449 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 SYNGR4O95473 234 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 HOXC12P31275 282 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 SRPXP78539 464 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 RUNX1Q01196 453 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 RHEBQ15382 184 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 TMEM164Q5U3C3 297 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 COMMD1Q8N668 190 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 SUMF2Q8NBJ7 301 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 APH1AQ96BI3 265 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 YPEL4Q96NS1 127 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 C12orf49Q9H741 205 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 KCNJ16Q9NPI9 418 aa13.03□□□□□ -0.32
TGFB1-201ENST00000221930 TRAV39A0A0B4J263 110 aa13.02□□□□□ -0.32
TGFB1-201ENST00000221930 A0A1W2PPQ1 181 aa13.02□□□□□ -0.32
TGFB1-201ENST00000221930 CD300LBA8K4G0 201 aa13.02□□□□□ -0.32
TGFB1-201ENST00000221930 SOD3P08294 240 aa13.02□□□□□ -0.32
TGFB1-201ENST00000221930 VAMP2P63027 116 aa13.02□□□□□ -0.32
TGFB1-201ENST00000221930 JOSD1Q15040 202 aaPredicted RBP13.02□□□□□ -0.32
TGFB1-201ENST00000221930 IZUMO4Q1ZYL8 232 aa13.02□□□□□ -0.32
TGFB1-201ENST00000221930 SPATA46Q5T0L3 261 aa13.02□□□□□ -0.32
TGFB1-201ENST00000221930 NUFIP2Q7Z417 695 aaKnown RBP13.02□□□□□ -0.32
TGFB1-201ENST00000221930 IL1F10Q8WWZ1 152 aa13.02□□□□□ -0.32
TGFB1-201ENST00000221930 HIST1H2AAQ96QV6 131 aa13.02□□□□□ -0.32
TGFB1-201ENST00000221930 LINC00470Q9BZP3 86 aa13.02□□□□□ -0.32
TGFB1-201ENST00000221930 LYRM2Q9NU23 88 aaPredicted RBP13.02□□□□□ -0.32
TGFB1-201ENST00000221930 B4GALT7Q9UBV7 327 aa13.02□□□□□ -0.32
TGFB1-201ENST00000221930 STRAPQ9Y3F4 350 aaKnown RBP13.02□□□□□ -0.32
TGFB1-201ENST00000221930 ATP23Q9Y6H3 246 aa13.02□□□□□ -0.32
TGFB1-201ENST00000221930 CACNA1HO95180 2353 aa13.02□□□□□ -0.32
TGFB1-201ENST00000221930 FAM90A10PA6NDY2 464 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 FAM90A18PA6NE21 464 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 FAM90A16PA6NEW6 464 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 FAM90A20PA6NIJ5 464 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 FAM90A8PA6NJQ4 464 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 FAM90A7PA6NKC0 464 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 FAM90A22PA8MWA6 464 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 FAM90A12PA8MX19 464 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 FAM90A5PA8MXJ8 464 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 FAM90A23PA8MXZ1 464 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 H3BP45 60 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 CHST1O43916 411 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 FAM90A15PP0C7V4 464 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 FAM90A13PP0C7W8 464 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 FAM90A14PP0C7W9 464 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 FAM90A24PP0C7X0 464 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 EPHA1P21709 976 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 CDKN1BP46527 198 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 SULT1A1P50225 295 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 DYNLT3P51808 116 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 ZNF266Q14584 549 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 HIKESHIQ53FT3 197 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 NMSQ5H8A3 153 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 ODF3L1Q8IXM7 274 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 ZNF610Q8N9Z0 462 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 OR51H1Q8NH63 302 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 POM121L2Q96KW2 1035 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 SLC35B3Q9H1N7 401 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 PLEKHF2Q9H8W4 249 aa13.02□□□□□ -0.33
TGFB1-201ENST00000221930 MAP1BP46821 2468 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms