RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 TRAV14DV4A0A0A6YYC5 116 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 TOX4O94842 621 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 MBPP02686 304 aaPredicted RBP10.34□□□□□ -0.75
CHPF2-201ENST00000035307 NPBWR1P48145 328 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 KCNJ3P48549 501 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 ABHD14BQ96IU4 210 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 HIPK2Q9H2X6 1198 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 HIVEP3Q5T1R4 2406 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 A0A0A6YYD4 124 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 ST8SIA5O15466 376 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 SPINK4O60575 86 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 SLC25A4P12235 298 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 FGF7P21781 194 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 G6PCP35575 357 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 AWAT1Q58HT5 328 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 STRAPQ9Y3F4 350 aaKnown RBP10.34□□□□□ -0.75
CHPF2-201ENST00000035307 A0A1W2PRD5 423 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 A0A1W2PRF3 423 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 A0A1W2PRM7 423 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 ZNF716A6NP11 495 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 E9PQ18 207 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 RHBDL1O75783 438 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 MGST1P10620 155 aaKnown RBP10.34□□□□□ -0.75
CHPF2-201ENST00000035307 ZNF708P17019 499 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 PMELP40967 661 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 GNB1P62873 340 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 EWSR1Q01844 656 aaKnown RBP eCLIP10.34□□□□□ -0.753e-7■■■□□ 15.4
CHPF2-201ENST00000035307 NHLH1Q02575 133 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 FAHD2BQ6P2I3 314 aaPredicted RBP10.34□□□□□ -0.75
CHPF2-201ENST00000035307 FAHD2AQ96GK7 314 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 WDYHV1Q96HA8 205 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 LYZL4Q96KX0 146 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 TAAR6Q96RI8 345 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 RSG1Q9BU20 258 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 DMXL1Q9Y485 3027 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 MALRD1Q5VYJ5 2156 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 MYO9AB2RTY4 2548 aa10.34□□□□□ -0.75
CHPF2-201ENST00000035307 TMEM30CPA0ZSE6 113 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 SMIM21Q3B7S5 101 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 LY6G6FQ5SQ64 297 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 LEAP2Q969E1 77 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 MALSU1Q96EH3 234 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 TMEM68Q96MH6 324 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 USP9XQ93008 2570 aaPredicted RBP10.33□□□□□ -0.76
CHPF2-201ENST00000035307 TUBAL3A6NHL2 446 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 PRF1P14222 555 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 ATP6V0CP27449 155 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 PSMB3P49720 205 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 S100A12P80511 92 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 VAX1Q5SQQ9 334 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 FAM201AQ5SY85 155 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 NSUN5P2Q63ZY6 315 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 BHLHA15Q7RTS1 189 aaPredicted RBP10.33□□□□□ -0.76
CHPF2-201ENST00000035307 OVCH2Q7RTZ1 564 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 PTX4Q96A99 478 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 GNPNAT1Q96EK6 184 aaPredicted RBP10.33□□□□□ -0.76
CHPF2-201ENST00000035307 TMEM204Q9BSN7 226 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 OR1A1Q9P1Q5 309 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 ARFGEF3Q5TH69 2177 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 DMDP11532 3685 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 TRDCB7Z8K6 153 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 SLC25A6P12236 298 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 SLC16A13Q7RTY0 426 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 MOGAT3Q86VF5 341 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 Q96M66 194 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 PATZ1Q9HBE1 687 aaKnown RBP10.33□□□□□ -0.76
CHPF2-201ENST00000035307 E9PLN8 166 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 WNT9BO14905 357 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 IGFBP3P17936 291 aaPredicted RBP10.33□□□□□ -0.76
CHPF2-201ENST00000035307 ETV3LQ6ZN32 361 aa10.33□□□□□ -0.76
CHPF2-201ENST00000035307 GMPPAQ96IJ6 420 aaPredicted RBP10.33□□□□□ -0.76
CHPF2-201ENST00000035307 PROB1E7EW31 1015 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 H7BYZ3 331 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 ASPHD2Q6ICH7 369 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 RBMS3Q6XE24 437 aaKnown RBP10.32□□□□□ -0.76
CHPF2-201ENST00000035307 IL34Q6ZMJ4 242 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 OR52L2PQ8NGH6 319 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 LINC01560Q8TB33 94 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 MRPS24Q96EL2 167 aaKnown RBP10.32□□□□□ -0.76
CHPF2-201ENST00000035307 S1PR3Q99500 378 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 CLN8Q9UBY8 286 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 NAV2Q8IVL1 2488 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 DVL1O14640 695 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 TMEM11P17152 192 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 VDAC1P21796 283 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 B3GALT5-AS1P59052 145 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 SLC38A11Q08AI6 406 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 HES1Q14469 280 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 NCMAPQ5T1S8 102 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 BIVMQ86UB2 503 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 ZNF429Q86V71 674 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 CABLES2Q9BTV7 478 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 TM4SF5O14894 197 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 OR7C2O60412 319 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 CD74P04233 296 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 FBP1P09467 338 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 MRPL41Q8IXM3 137 aaKnown RBP10.32□□□□□ -0.76
CHPF2-201ENST00000035307 ZCCHC14Q8WYQ9 949 aaKnown RBP10.32□□□□□ -0.76
CHPF2-201ENST00000035307 ACY3Q96HD9 319 aa10.32□□□□□ -0.76
CHPF2-201ENST00000035307 TP53RKQ96S44 253 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms