RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 TGOLN2O43493 480 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 WDR1O75083 606 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 MPZL1O95297 269 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 CD8AP01732 235 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 SRSF4Q08170 494 aaKnown RBP9.92□□□□□ -0.82
LINC00538-201ENST00000626109 C2orf68Q2NKX9 166 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 SCGB2B2Q4G0G5 96 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 CCDC144NLQ6NUI1 221 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 ALKAL2Q6UX46 152 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 RBMS3Q6XE24 437 aaKnown RBP9.92□□□□□ -0.82
LINC00538-201ENST00000626109 ZDHHC22Q8N966 263 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 AJUBAQ96IF1 538 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 PDCD10Q9BUL8 212 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 SRXN1Q9BYN0 137 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 REG4Q9BYZ8 158 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 PRRG4Q9BZD6 226 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 CHST6Q9GZX3 395 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 GSKIPQ9P0R6 139 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 MEMO1Q9Y316 297 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 EPG5Q9HCE0 2579 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 KANTRA0A1W2PQU2 76 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 SYT7O43581 403 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 IFNA2P01563 188 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 IGHV2-70P01814 119 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 HLA-DOBP13765 273 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 TBPP20226 339 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 RAB3AP20336 220 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 PRKXP51817 358 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 POU3F1Q03052 451 aaPredicted RBP9.92□□□□□ -0.82
LINC00538-201ENST00000626109 GAGE1Q13065 139 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 OR2F1Q13607 317 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 ZNF239Q16600 458 aaKnown RBP9.92□□□□□ -0.82
LINC00538-201ENST00000626109 CDNFQ49AH0 187 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 GCSAMLQ5JQS6 135 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 UTF1Q5T230 341 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 OTPQ5XKR4 325 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 PLXDC2Q6UX71 529 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 BTNL3Q6UXE8 466 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 HSD17B13Q7Z5P4 300 aaPredicted RBP9.92□□□□□ -0.82
LINC00538-201ENST00000626109 EIF4E3Q8N5X7 224 aaKnown RBP9.92□□□□□ -0.82
LINC00538-201ENST00000626109 AQP3Q92482 292 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 ZNF75AQ96N20 296 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 PIGMQ9H3S5 423 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 MOB1AQ9H8S9 216 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 GPR35Q9HC97 309 aa9.92□□□□□ -0.82
LINC00538-201ENST00000626109 PQLC2LA1A4F0 135 aa9.91□□□□□ -0.82
LINC00538-201ENST00000626109 SLC22A20A6NK97 555 aa9.91□□□□□ -0.82
LINC00538-201ENST00000626109 PRB1P04280 392 aa9.91□□□□□ -0.82
LINC00538-201ENST00000626109 HOXD4P09016 255 aaPredicted RBP9.91□□□□□ -0.82
LINC00538-201ENST00000626109 SLC25A4P12235 298 aa9.91□□□□□ -0.82
LINC00538-201ENST00000626109 MPGP29372 298 aa9.91□□□□□ -0.82
LINC00538-201ENST00000626109 UBE2MP61081 183 aaKnown RBP9.91□□□□□ -0.82
LINC00538-201ENST00000626109 FAM3AP98173 230 aa9.91□□□□□ -0.82
LINC00538-201ENST00000626109 ZNF345Q14585 488 aa9.91□□□□□ -0.82
LINC00538-201ENST00000626109 ZNF260Q3ZCT1 412 aa9.91□□□□□ -0.82
LINC00538-201ENST00000626109 ACSF3Q4G176 576 aaPredicted RBP9.91□□□□□ -0.82
LINC00538-201ENST00000626109 SLC25A42Q86VD7 318 aa9.91□□□□□ -0.82
LINC00538-201ENST00000626109 CHST4Q8NCG5 386 aa9.91□□□□□ -0.82
LINC00538-201ENST00000626109 OR1M1Q8NGA1 313 aa9.91□□□□□ -0.82
LINC00538-201ENST00000626109 OR52L2PQ8NGH6 319 aa9.91□□□□□ -0.82
LINC00538-201ENST00000626109 OR51A2Q8NGJ7 313 aa9.91□□□□□ -0.82
LINC00538-201ENST00000626109 OR2AJ1Q8NGZ0 328 aa9.91□□□□□ -0.82
LINC00538-201ENST00000626109 FGGYQ96C11 551 aa9.91□□□□□ -0.82
LINC00538-201ENST00000626109 SLAMF6Q96DU3 332 aa9.91□□□□□ -0.82
LINC00538-201ENST00000626109 PHB2Q99623 299 aa9.91□□□□□ -0.82
LINC00538-201ENST00000626109 FBLN5Q9UBX5 448 aa9.91□□□□□ -0.82
LINC00538-201ENST00000626109 ZNF835Q9Y2P0 537 aa9.91□□□□□ -0.82
LINC00538-201ENST00000626109 NOP16Q9Y3C1 178 aaKnown RBP9.91□□□□□ -0.82
LINC00538-201ENST00000626109 X6R8D5 127 aa9.91□□□□□ -0.82
LINC00538-201ENST00000626109 ZNF407Q9C0G0 2248 aa9.91□□□□□ -0.82
LINC00538-201ENST00000626109 IGHV3-15A0A0B4J1V0 119 aa9.9□□□□□ -0.82
LINC00538-201ENST00000626109 OR5H14A6NHG9 310 aa9.9□□□□□ -0.82
LINC00538-201ENST00000626109 A8MXK9 166 aa9.9□□□□□ -0.82
LINC00538-201ENST00000626109 SCO1O75880 301 aa9.9□□□□□ -0.82
LINC00538-201ENST00000626109 HLA-AP01891 365 aaKnown RBP9.9□□□□□ -0.82
LINC00538-201ENST00000626109 ZNF20P17024 532 aa9.9□□□□□ -0.82
LINC00538-201ENST00000626109 TIMP3P35625 211 aa9.9□□□□□ -0.82
LINC00538-201ENST00000626109 CSNK1A1P48729 337 aa9.9□□□□□ -0.82
LINC00538-201ENST00000626109 PLP1P60201 277 aa9.9□□□□□ -0.82
LINC00538-201ENST00000626109 H3F3AP84243 136 aa9.9□□□□□ -0.82
LINC00538-201ENST00000626109 DHRS2Q13268 280 aa9.9□□□□□ -0.82
LINC00538-201ENST00000626109 ZNF660Q6AZW8 331 aaPredicted RBP9.9□□□□□ -0.82
LINC00538-201ENST00000626109 TRAPPC6BQ86SZ2 158 aa9.9□□□□□ -0.82
LINC00538-201ENST00000626109 ZNF843Q8N446 348 aa9.9□□□□□ -0.82
LINC00538-201ENST00000626109 PXT1Q8NFP0 134 aa9.9□□□□□ -0.82
LINC00538-201ENST00000626109 FNDC9Q8TBE3 224 aa9.9□□□□□ -0.82
LINC00538-201ENST00000626109 PTH2Q96A98 100 aa9.9□□□□□ -0.82
LINC00538-201ENST00000626109 PBOV1Q9GZY1 135 aa9.9□□□□□ -0.82
LINC00538-201ENST00000626109 FAM206AQ9NX38 181 aa9.9□□□□□ -0.82
LINC00538-201ENST00000626109 CLCF1Q9UBD9 225 aa9.9□□□□□ -0.82
LINC00538-201ENST00000626109 ATRXP46100 2492 aa9.9□□□□□ -0.82
LINC00538-201ENST00000626109 SPTA1P02549 2419 aa9.9□□□□□ -0.83
LINC00538-201ENST00000626109 MED12Q93074 2177 aa9.9□□□□□ -0.83
LINC00538-201ENST00000626109 A0A1B0GTI1 187 aa9.9□□□□□ -0.83
LINC00538-201ENST00000626109 TMEM235A6NFC5 223 aa9.9□□□□□ -0.83
LINC00538-201ENST00000626109 SGCEO43556 437 aa9.9□□□□□ -0.83
LINC00538-201ENST00000626109 CNIH1O95406 144 aa9.9□□□□□ -0.83
LINC00538-201ENST00000626109 BIDP55957 195 aa9.9□□□□□ -0.83
LINC00538-201ENST00000626109 CLRN1P58418 232 aa9.9□□□□□ -0.83
LINC00538-201ENST00000626109 TAS2R31P59538 309 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms