RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 ARL16Q0P5N6 197 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 RTP5Q14D33 572 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 IZUMO4Q1ZYL8 232 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 ACSF3Q4G176 576 aaPredicted RBP12.08□□□□□ -0.48
LDB3-209ENST00000623056 ACTL10Q5JWF8 245 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 PLXDC1Q8IUK5 500 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 ZNF525Q8N782 197 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 FADS6Q8N9I5 356 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 OR1F12Q8NHA8 337 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 A0A1W2PPQ1 181 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 LRRC3CA6NJW4 275 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 M0R143 59 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 CNOT4O95628 575 aaKnown RBP12.08□□□□□ -0.48
LDB3-209ENST00000623056 HRASP01112 189 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 GNB2P62879 340 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 RELQ04864 619 aaPredicted RBP12.08□□□□□ -0.48
LDB3-209ENST00000623056 HNF4GQ14541 408 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 TMEM41BQ5BJD5 291 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 PRAMEF20Q5VT98 475 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 ZNF611Q8N823 705 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 PIGCQ92535 297 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 RPUSD4Q96CM3 377 aaKnown RBP12.08□□□□□ -0.48
LDB3-209ENST00000623056 PLK3Q9H4B4 646 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 PPP1R14DQ9NXH3 145 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 WNT16Q9UBV4 365 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 LAMA1P25391 3075 aa12.07□□□□□ -0.48
LDB3-209ENST00000623056 LMO7DNF2Z398 122 aa12.07□□□□□ -0.48
LDB3-209ENST00000623056 METTL15P1P0C7V9 234 aa12.07□□□□□ -0.48
LDB3-209ENST00000623056 FKBP2P26885 142 aaKnown RBP12.07□□□□□ -0.48
LDB3-209ENST00000623056 CCKARP32238 428 aa12.07□□□□□ -0.48
LDB3-209ENST00000623056 ELLP55199 621 aaPredicted RBP12.07□□□□□ -0.48
LDB3-209ENST00000623056 ERVFC1-1P60608 527 aa12.07□□□□□ -0.48
LDB3-209ENST00000623056 SERF2P84101 59 aa12.07□□□□□ -0.48
LDB3-209ENST00000623056 MEF2BQ02080 365 aaPredicted RBP12.07□□□□□ -0.48
LDB3-209ENST00000623056 TLE1Q04724 770 aa12.07□□□□□ -0.48
LDB3-209ENST00000623056 PRSS8Q16651 343 aa12.07□□□□□ -0.48
LDB3-209ENST00000623056 HAPLN4Q86UW8 402 aa12.07□□□□□ -0.48
LDB3-209ENST00000623056 IGKV1-6A0A0C4DH72 117 aa12.06□□□□□ -0.48
LDB3-209ENST00000623056 hCG_38984A0A1B0GV85 526 aa12.06□□□□□ -0.48
LDB3-209ENST00000623056 IFNL4K9M1U5 179 aa12.06□□□□□ -0.48
LDB3-209ENST00000623056 SOX15O60248 233 aa12.06□□□□□ -0.48
LDB3-209ENST00000623056 PIAS2O75928 621 aa12.06□□□□□ -0.48
LDB3-209ENST00000623056 IAPPP10997 89 aa12.06□□□□□ -0.48
LDB3-209ENST00000623056 TDGF1P3P51864 188 aa12.06□□□□□ -0.48
LDB3-209ENST00000623056 LRRC75BQ2VPJ9 315 aa12.06□□□□□ -0.48
LDB3-209ENST00000623056 CARFQ8N187 725 aa12.06□□□□□ -0.48
LDB3-209ENST00000623056 GPR137CQ8N3F9 429 aa12.06□□□□□ -0.48
LDB3-209ENST00000623056 LHX4Q969G2 390 aa12.06□□□□□ -0.48
LDB3-209ENST00000623056 IGLV3-12A0A075B6K2 115 aa12.06□□□□□ -0.48
LDB3-209ENST00000623056 DUX1O43812 170 aa12.06□□□□□ -0.48
LDB3-209ENST00000623056 ZFAND5O76080 213 aa12.06□□□□□ -0.48
LDB3-209ENST00000623056 NAPSAO96009 420 aa12.06□□□□□ -0.48
LDB3-209ENST00000623056 PATE4P0C8F1 98 aa12.06□□□□□ -0.48
LDB3-209ENST00000623056 ZNF25P17030 456 aaPredicted RBP12.06□□□□□ -0.48
LDB3-209ENST00000623056 F2RP25116 425 aa12.06□□□□□ -0.48
LDB3-209ENST00000623056 CD38P28907 300 aa12.06□□□□□ -0.48
LDB3-209ENST00000623056 ZNF92Q03936 586 aa12.06□□□□□ -0.48
LDB3-209ENST00000623056 RHBDD2Q6NTF9 364 aa12.06□□□□□ -0.48
LDB3-209ENST00000623056 Q6ZRM9 215 aa12.06□□□□□ -0.48
LDB3-209ENST00000623056 ZIC4Q8N9L1 334 aa12.06□□□□□ -0.48
LDB3-209ENST00000623056 SPACA9Q96E40 222 aaPredicted RBP12.06□□□□□ -0.48
LDB3-209ENST00000623056 THOC3Q96J01 351 aaKnown RBP12.06□□□□□ -0.48
LDB3-209ENST00000623056 WFIKKN1Q96NZ8 548 aa12.06□□□□□ -0.48
LDB3-209ENST00000623056 A0A1W2PR77 199 aa12.05□□□□□ -0.48
LDB3-209ENST00000623056 SFTPCP11686 197 aa12.05□□□□□ -0.48
LDB3-209ENST00000623056 RAB4AP20338 218 aa12.05□□□□□ -0.48
LDB3-209ENST00000623056 SRSF7Q16629 238 aaKnown RBP eCLIP12.05□□□□□ -0.48
LDB3-209ENST00000623056 ACOT6Q3I5F7 207 aaPredicted RBP12.05□□□□□ -0.48
LDB3-209ENST00000623056 GBGT1Q8N5D6 347 aa12.05□□□□□ -0.48
LDB3-209ENST00000623056 OR51I2Q9H344 312 aa12.05□□□□□ -0.48
LDB3-209ENST00000623056 PSENENQ9NZ42 101 aa12.05□□□□□ -0.48
LDB3-209ENST00000623056 OR6C3Q9NZP0 311 aa12.05□□□□□ -0.48
LDB3-209ENST00000623056 EML6Q6ZMW3 1958 aa12.05□□□□□ -0.48
LDB3-209ENST00000623056 OR6C6A6NF89 314 aa12.05□□□□□ -0.48
LDB3-209ENST00000623056 VAMP5O95183 116 aa12.05□□□□□ -0.48
LDB3-209ENST00000623056 SCGB1D1O95968 90 aa12.05□□□□□ -0.48
LDB3-209ENST00000623056 SLC25A6P12236 298 aa12.05□□□□□ -0.48
LDB3-209ENST00000623056 PLA2G5P39877 138 aa12.05□□□□□ -0.48
LDB3-209ENST00000623056 C1orf194Q5T5A4 169 aa12.05□□□□□ -0.48
LDB3-209ENST00000623056 OR2T10Q8NGZ9 312 aa12.05□□□□□ -0.48
LDB3-209ENST00000623056 OR51H1Q8NH63 302 aa12.05□□□□□ -0.48
LDB3-209ENST00000623056 PINX1Q96BK5 328 aaKnown RBP12.05□□□□□ -0.48
LDB3-209ENST00000623056 R3HDM4Q96D70 268 aa12.05□□□□□ -0.48
LDB3-209ENST00000623056 RASL10BQ96S79 203 aa12.05□□□□□ -0.48
LDB3-209ENST00000623056 PARLQ9H300 379 aa12.05□□□□□ -0.48
LDB3-209ENST00000623056 FKBP11Q9NYL4 201 aa12.05□□□□□ -0.48
LDB3-209ENST00000623056 POLR3KQ9Y2Y1 108 aaPredicted RBP12.05□□□□□ -0.48
LDB3-209ENST00000623056 ASCC3Q8N3C0 2202 aaKnown RBP12.05□□□□□ -0.48
LDB3-209ENST00000623056 KIR2DL5BA0A0G2JN68 375 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 KIR2DL5BA0A0G2JPC4 375 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 TMEM210A6NLX4 147 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 HSPB6O14558 160 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 SYNGR2O43760 224 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 GGCTO75223 188 aaKnown RBP12.04□□□□□ -0.48
LDB3-209ENST00000623056 PSG2P11465 335 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 MYF5P13349 255 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 ZNF32P17041 273 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 KIR2DL5AQ8N109 375 aa12.04□□□□□ -0.48
LDB3-209ENST00000623056 MRPL30Q8TCC3 161 aaKnown RBP12.04□□□□□ -0.48
LDB3-209ENST00000623056 WDR61Q9GZS3 305 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms