RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 CCRL2O00421 344 aa13.62□□□□□ -0.23
HMGN3-203ENST00000620514 SLC31A2O15432 143 aa13.62□□□□□ -0.23
HMGN3-203ENST00000620514 MAPK3P27361 379 aaPredicted RBP13.62□□□□□ -0.23
HMGN3-203ENST00000620514 AQP4P55087 323 aa13.62□□□□□ -0.23
HMGN3-203ENST00000620514 GABPB1Q06547 395 aaPredicted RBP13.62□□□□□ -0.23
HMGN3-203ENST00000620514 ZNF816Q0VGE8 651 aaPredicted RBP13.62□□□□□ -0.23
HMGN3-203ENST00000620514 ACSM3Q53FZ2 586 aa13.62□□□□□ -0.23
HMGN3-203ENST00000620514 RNLSQ5VYX0 342 aa13.62□□□□□ -0.23
HMGN3-203ENST00000620514 SIGIRRQ6IA17 410 aa13.62□□□□□ -0.23
HMGN3-203ENST00000620514 UNQ9370/PRO34162Q6UXP9 181 aa13.62□□□□□ -0.23
HMGN3-203ENST00000620514 MOB3BQ86TA1 216 aa13.62□□□□□ -0.23
HMGN3-203ENST00000620514 LINC00311Q8N616 119 aa13.62□□□□□ -0.23
HMGN3-203ENST00000620514 NKAIN3Q8N8D7 197 aa13.62□□□□□ -0.23
HMGN3-203ENST00000620514 C5orf56Q8N8D9 126 aa13.62□□□□□ -0.23
HMGN3-203ENST00000620514 MYDGFQ969H8 173 aa13.62□□□□□ -0.23
HMGN3-203ENST00000620514 FAM46BQ96A09 425 aa13.62□□□□□ -0.23
HMGN3-203ENST00000620514 Q96M66 194 aa13.62□□□□□ -0.23
HMGN3-203ENST00000620514 TMED9Q9BVK6 235 aa13.62□□□□□ -0.23
HMGN3-203ENST00000620514 MND1Q9BWT6 205 aa13.62□□□□□ -0.23
HMGN3-203ENST00000620514 TRAPPC2LQ9UL33 140 aa13.62□□□□□ -0.23
HMGN3-203ENST00000620514 LSM2Q9Y333 95 aaKnown RBP13.62□□□□□ -0.23
HMGN3-203ENST00000620514 IGHV1-3A0A0C4DH29 117 aa13.61□□□□□ -0.23
HMGN3-203ENST00000620514 UBE2QL1A1L167 161 aa13.61□□□□□ -0.23
HMGN3-203ENST00000620514 RCC1P18754 421 aaPredicted RBP13.61□□□□□ -0.23
HMGN3-203ENST00000620514 C5orf24Q7Z6I8 188 aa13.61□□□□□ -0.23
HMGN3-203ENST00000620514 GAPTQ8N292 157 aa13.61□□□□□ -0.23
HMGN3-203ENST00000620514 OR10V1Q8NGI7 309 aa13.61□□□□□ -0.23
HMGN3-203ENST00000620514 OR1L1Q8NH94 360 aa13.61□□□□□ -0.23
HMGN3-203ENST00000620514 RBMXL1Q96E39 390 aaKnown RBP13.61□□□□□ -0.23
HMGN3-203ENST00000620514 UQCC2Q9BRT2 126 aa13.61□□□□□ -0.23
HMGN3-203ENST00000620514 FAM90A10PA6NDY2 464 aa13.6□□□□□ -0.23
HMGN3-203ENST00000620514 FAM90A7PA6NKC0 464 aa13.6□□□□□ -0.23
HMGN3-203ENST00000620514 FAM90A23PA8MXZ1 464 aa13.6□□□□□ -0.23
HMGN3-203ENST00000620514 GAPDHP04406 335 aaKnown RBP13.6□□□□□ -0.23
HMGN3-203ENST00000620514 FUT3P21217 361 aa13.6□□□□□ -0.23
HMGN3-203ENST00000620514 GPR50Q13585 617 aa13.6□□□□□ -0.23
HMGN3-203ENST00000620514 SPHARQ15513 63 aa13.6□□□□□ -0.23
HMGN3-203ENST00000620514 OR10K2Q6IF99 312 aa13.6□□□□□ -0.23
HMGN3-203ENST00000620514 LRRTM1Q86UE6 522 aa13.6□□□□□ -0.23
HMGN3-203ENST00000620514 PRR18Q8N4B5 295 aa13.6□□□□□ -0.23
HMGN3-203ENST00000620514 C8orf31Q8N9H6 132 aa13.6□□□□□ -0.23
HMGN3-203ENST00000620514 ZNF439Q8NDP4 499 aa13.6□□□□□ -0.23
HMGN3-203ENST00000620514 OR4X2Q8NGF9 303 aa13.6□□□□□ -0.23
HMGN3-203ENST00000620514 THRSPQ92748 146 aa13.6□□□□□ -0.23
HMGN3-203ENST00000620514 ST6GALNAC6Q969X2 333 aa13.6□□□□□ -0.23
HMGN3-203ENST00000620514 NOL4LQ96MY1 436 aaPredicted RBP13.6□□□□□ -0.23
HMGN3-203ENST00000620514 TSSC4Q9Y5U2 329 aaPredicted RBP13.6□□□□□ -0.23
HMGN3-203ENST00000620514 SPINT2O43291 252 aa13.59□□□□□ -0.23
HMGN3-203ENST00000620514 SC5DO75845 299 aa13.59□□□□□ -0.23
HMGN3-203ENST00000620514 MPIG6BO95866 241 aa13.59□□□□□ -0.23
HMGN3-203ENST00000620514 HBZP02008 142 aa13.59□□□□□ -0.23
HMGN3-203ENST00000620514 ZNF134P52741 427 aa13.59□□□□□ -0.23
HMGN3-203ENST00000620514 EBI3Q14213 229 aa13.59□□□□□ -0.23
HMGN3-203ENST00000620514 IRF3Q14653 427 aa13.59□□□□□ -0.23
HMGN3-203ENST00000620514 MED22Q15528 200 aa13.59□□□□□ -0.23
HMGN3-203ENST00000620514 KHDC1LQ5JSQ8 128 aa13.59□□□□□ -0.23
HMGN3-203ENST00000620514 RBM48Q5RL73 367 aaKnown RBP13.59□□□□□ -0.23
HMGN3-203ENST00000620514 C6orf183Q5T699 404 aa13.59□□□□□ -0.23
HMGN3-203ENST00000620514 ZNF329Q86UD4 541 aa13.59□□□□□ -0.23
HMGN3-203ENST00000620514 MS4A15Q8N5U1 240 aa13.59□□□□□ -0.23
HMGN3-203ENST00000620514 RTN4IP1Q8WWV3 396 aaPredicted RBP13.59□□□□□ -0.23
HMGN3-203ENST00000620514 EAF1Q96JC9 268 aaPredicted RBP13.59□□□□□ -0.23
HMGN3-203ENST00000620514 KCNK15Q9H427 330 aa13.59□□□□□ -0.23
HMGN3-203ENST00000620514 SCN3BQ9NY72 215 aa13.59□□□□□ -0.23
HMGN3-203ENST00000620514 GNG12Q9UBI6 72 aa13.59□□□□□ -0.23
HMGN3-203ENST00000620514 LINC00527Q9UJ94 153 aa13.59□□□□□ -0.23
HMGN3-203ENST00000620514 PSMB11A5LHX3 300 aa13.58□□□□□ -0.24
HMGN3-203ENST00000620514 ZNF736B4DX44 427 aaPredicted RBP13.58□□□□□ -0.24
HMGN3-203ENST00000620514 H0YHG0 523 aa13.58□□□□□ -0.24
HMGN3-203ENST00000620514 FGF16O43320 207 aa13.58□□□□□ -0.24
HMGN3-203ENST00000620514 PDCD6O75340 191 aa13.58□□□□□ -0.24
HMGN3-203ENST00000620514 VSIG8P0DPA2 414 aa13.58□□□□□ -0.24
HMGN3-203ENST00000620514 PF4V1P10720 104 aa13.58□□□□□ -0.24
HMGN3-203ENST00000620514 SLC35A2P78381 396 aa13.58□□□□□ -0.24
HMGN3-203ENST00000620514 CT45A1Q5HYN5 189 aa13.58□□□□□ -0.24
HMGN3-203ENST00000620514 NKAPLQ5M9Q1 402 aa13.58□□□□□ -0.24
HMGN3-203ENST00000620514 SLC25A48Q6ZT89 311 aaKnown RBP13.58□□□□□ -0.24
HMGN3-203ENST00000620514 CEACAM19Q7Z692 300 aa13.58□□□□□ -0.24
HMGN3-203ENST00000620514 IZUMO1Q8IYV9 350 aa13.58□□□□□ -0.24
HMGN3-203ENST00000620514 Q8N6K4 173 aa13.58□□□□□ -0.24
HMGN3-203ENST00000620514 CT45A3Q8NHU0 189 aa13.58□□□□□ -0.24
HMGN3-203ENST00000620514 MRPL30Q8TCC3 161 aaKnown RBP13.58□□□□□ -0.24
HMGN3-203ENST00000620514 TAF9BQ9HBM6 251 aa13.58□□□□□ -0.24
HMGN3-203ENST00000620514 LINC01548A6NM66 108 aa13.57□□□□□ -0.24
HMGN3-203ENST00000620514 CA11O75493 328 aa13.57□□□□□ -0.24
HMGN3-203ENST00000620514 GLAP06280 429 aa13.57□□□□□ -0.24
HMGN3-203ENST00000620514 IGLL1P15814 213 aa13.57□□□□□ -0.24
HMGN3-203ENST00000620514 CD33P20138 364 aa13.57□□□□□ -0.24
HMGN3-203ENST00000620514 IL3RAP26951 378 aa13.57□□□□□ -0.24
HMGN3-203ENST00000620514 GNMTQ14749 295 aa13.57□□□□□ -0.24
HMGN3-203ENST00000620514 Q3ZCU0 254 aa13.57□□□□□ -0.24
HMGN3-203ENST00000620514 C1orf100Q5SVJ3 147 aa13.57□□□□□ -0.24
HMGN3-203ENST00000620514 GLT8D1Q68CQ7 371 aa13.57□□□□□ -0.24
HMGN3-203ENST00000620514 WFDC9Q8NEX5 89 aa13.57□□□□□ -0.24
HMGN3-203ENST00000620514 PHYHIPQ92561 330 aa13.57□□□□□ -0.24
HMGN3-203ENST00000620514 TMEM203Q969S6 136 aa13.57□□□□□ -0.24
HMGN3-203ENST00000620514 PHF21AQ96BD5 680 aa13.57□□□□□ -0.24
HMGN3-203ENST00000620514 CST11Q9H112 138 aa13.57□□□□□ -0.24
HMGN3-203ENST00000620514 MBNL3Q9NUK0 354 aaKnown RBP13.57□□□□□ -0.24
HMGN3-203ENST00000620514 GHRLQ9UBU3 117 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms