RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 VSIRQ9H7M9 311 aa17.39■□□□□ 0.37
NEK3-208ENST00000618534 ZNF665Q9H7R5 613 aa17.39■□□□□ 0.37
NEK3-208ENST00000618534 RPRMQ9NS64 109 aa17.39■□□□□ 0.37
NEK3-208ENST00000618534 HS3ST1O14792 307 aa17.39■□□□□ 0.37
NEK3-208ENST00000618534 SERPINE2P07093 398 aa17.39■□□□□ 0.37
NEK3-208ENST00000618534 Q6ZRM9 215 aa17.39■□□□□ 0.37
NEK3-208ENST00000618534 PPP1R32Q7Z5V6 425 aa17.39■□□□□ 0.37
NEK3-208ENST00000618534 OR10G4Q8NGN3 311 aa17.39■□□□□ 0.37
NEK3-208ENST00000618534 RDH5Q92781 318 aa17.39■□□□□ 0.37
NEK3-208ENST00000618534 TMEM45BQ96B21 275 aa17.39■□□□□ 0.37
NEK3-208ENST00000618534 OR2W1Q9Y3N9 320 aa17.39■□□□□ 0.37
NEK3-208ENST00000618534 FRYLO94915 3013 aa17.39■□□□□ 0.37
NEK3-208ENST00000618534 A0A1B0GU03 582 aa17.38■□□□□ 0.37
NEK3-208ENST00000618534 JMJD7P0C870 316 aa17.38■□□□□ 0.37
NEK3-208ENST00000618534 GFRA1P56159 465 aa17.38■□□□□ 0.37
NEK3-208ENST00000618534 H1FOOQ8IZA3 346 aaPredicted RBP17.38■□□□□ 0.37
NEK3-208ENST00000618534 OR10D4PQ8NGN7 298 aa17.38■□□□□ 0.37
NEK3-208ENST00000618534 RNASE11Q8TAA1 199 aaKnown RBP17.38■□□□□ 0.37
NEK3-208ENST00000618534 NGFP01138 241 aa17.38■□□□□ 0.37
NEK3-208ENST00000618534 CFIP05156 583 aa17.38■□□□□ 0.37
NEK3-208ENST00000618534 SOD3P08294 240 aa17.38■□□□□ 0.37
NEK3-208ENST00000618534 NRN1LQ496H8 165 aa17.38■□□□□ 0.37
NEK3-208ENST00000618534 PDZD11Q5EBL8 140 aa17.38■□□□□ 0.37
NEK3-208ENST00000618534 ZNF787Q6DD87 383 aa17.38■□□□□ 0.37
NEK3-208ENST00000618534 LCN15Q6UWW0 184 aa17.38■□□□□ 0.37
NEK3-208ENST00000618534 ZNF383Q8NA42 475 aa17.38■□□□□ 0.37
NEK3-208ENST00000618534 RAB40CQ96S21 281 aa17.38■□□□□ 0.37
NEK3-208ENST00000618534 ERRFI1Q9UJM3 462 aaPredicted RBP17.38■□□□□ 0.37
NEK3-208ENST00000618534 PILRBQ9UKJ0 227 aa17.38■□□□□ 0.37
NEK3-208ENST00000618534 TNRC6AQ8NDV7 1962 aaKnown RBP17.37■□□□□ 0.37
NEK3-208ENST00000618534 ZNF729A6NN14 1252 aaPredicted RBP17.37■□□□□ 0.37
NEK3-208ENST00000618534 SEC14L6B5MCN3 397 aa17.37■□□□□ 0.37
NEK3-208ENST00000618534 CNOT4O95628 575 aaKnown RBP17.37■□□□□ 0.37
NEK3-208ENST00000618534 BCL2P10415 239 aa17.37■□□□□ 0.37
NEK3-208ENST00000618534 IAPPP10997 89 aa17.37■□□□□ 0.37
NEK3-208ENST00000618534 S100GP29377 79 aa17.37■□□□□ 0.37
NEK3-208ENST00000618534 SRYQ05066 204 aa17.37■□□□□ 0.37
NEK3-208ENST00000618534 ZNF726P1Q15940 193 aa17.37■□□□□ 0.37
NEK3-208ENST00000618534 SSX7Q7RTT5 188 aa17.37■□□□□ 0.37
NEK3-208ENST00000618534 OR10J5Q8NHC4 309 aa17.37■□□□□ 0.37
NEK3-208ENST00000618534 NTN3O00634 580 aaPredicted RBP17.37■□□□□ 0.37
NEK3-208ENST00000618534 FGF8P55075 233 aaPredicted RBP17.37■□□□□ 0.37
NEK3-208ENST00000618534 NKX6-1P78426 367 aaPredicted RBP17.37■□□□□ 0.37
NEK3-208ENST00000618534 ZFP36L1Q07352 338 aaKnown RBP17.37■□□□□ 0.37
NEK3-208ENST00000618534 ARL16Q0P5N6 197 aa17.37■□□□□ 0.37
NEK3-208ENST00000618534 PSMF1Q92530 271 aa17.37■□□□□ 0.37
NEK3-208ENST00000618534 GPR61Q9BZJ8 451 aa17.37■□□□□ 0.37
NEK3-208ENST00000618534 CISD1Q9NZ45 108 aaKnown RBP17.37■□□□□ 0.37
NEK3-208ENST00000618534 TREM2Q9NZC2 230 aa17.37■□□□□ 0.37
NEK3-208ENST00000618534 CACNG5Q9UF02 275 aa17.37■□□□□ 0.37
NEK3-208ENST00000618534 TRAV24A0A0B4J272 114 aa17.36■□□□□ 0.37
NEK3-208ENST00000618534 B4DEV8 164 aa17.36■□□□□ 0.37
NEK3-208ENST00000618534 IGKV1-39P01597 117 aa17.36■□□□□ 0.37
NEK3-208ENST00000618534 IGKV1D-39P04432 117 aa17.36■□□□□ 0.37
NEK3-208ENST00000618534 C17orf78Q8N4C9 275 aa17.36■□□□□ 0.37
NEK3-208ENST00000618534 APOBEC3DQ96AK3 386 aaPredicted RBP17.36■□□□□ 0.37
NEK3-208ENST00000618534 PFDN5Q99471 154 aa17.36■□□□□ 0.37
NEK3-208ENST00000618534 OR1A1Q9P1Q5 309 aa17.36■□□□□ 0.37
NEK3-208ENST00000618534 PPP1R2P9O14990 202 aa17.36■□□□□ 0.37
NEK3-208ENST00000618534 METTL15P1P0C7V9 234 aa17.36■□□□□ 0.37
NEK3-208ENST00000618534 SLC25A6P12236 298 aa17.36■□□□□ 0.37
NEK3-208ENST00000618534 HIST3H2BBQ8N257 126 aa17.36■□□□□ 0.37
NEK3-208ENST00000618534 OR13D1Q8NGV5 346 aa17.36■□□□□ 0.37
NEK3-208ENST00000618534 SCGB1C1Q8TD33 95 aa17.36■□□□□ 0.37
NEK3-208ENST00000618534 IL1F10Q8WWZ1 152 aa17.36■□□□□ 0.37
NEK3-208ENST00000618534 FAM210BQ96KR6 192 aa17.36■□□□□ 0.37
NEK3-208ENST00000618534 RIMS4Q9H426 269 aaPredicted RBP17.36■□□□□ 0.37
NEK3-208ENST00000618534 GATCO43716 136 aaKnown RBP17.35■□□□□ 0.37
NEK3-208ENST00000618534 LILRA1O75019 489 aa17.35■□□□□ 0.37
NEK3-208ENST00000618534 TRGC1P0CF51 173 aa17.35■□□□□ 0.37
NEK3-208ENST00000618534 PMS2CLQ68D20 193 aa17.35■□□□□ 0.37
NEK3-208ENST00000618534 C1orf87Q8N0U7 546 aa17.35■□□□□ 0.37
NEK3-208ENST00000618534 OR5A2Q8NGI9 324 aa17.35■□□□□ 0.37
NEK3-208ENST00000618534 ABHD5Q8WTS1 349 aa17.35■□□□□ 0.37
NEK3-208ENST00000618534 FRZBQ92765 325 aa17.35■□□□□ 0.37
NEK3-208ENST00000618534 OR2T2Q6IF00 324 aa17.35■□□□□ 0.37
NEK3-208ENST00000618534 HAPLN4Q86UW8 402 aa17.35■□□□□ 0.37
NEK3-208ENST00000618534 ZNF525Q8N782 197 aa17.35■□□□□ 0.37
NEK3-208ENST00000618534 GTF3AQ92664 365 aaKnown RBP17.35■□□□□ 0.37
NEK3-208ENST00000618534 HIST1H2AAQ96QV6 131 aa17.35■□□□□ 0.37
NEK3-208ENST00000618534 IGKV3D-15A0A087WSY6 115 aa17.34■□□□□ 0.37
NEK3-208ENST00000618534 TRBV6-6A0A0A6YYG2 114 aa17.34■□□□□ 0.37
NEK3-208ENST00000618534 TRAV39A0A0B4J263 110 aa17.34■□□□□ 0.37
NEK3-208ENST00000618534 ARGFXA6NJG6 315 aa17.34■□□□□ 0.37
NEK3-208ENST00000618534 SYNGR2O43760 224 aa17.34■□□□□ 0.37
NEK3-208ENST00000618534 SS18L1O75177 396 aaPredicted RBP17.34■□□□□ 0.37
NEK3-208ENST00000618534 TRA2AQ13595 282 aaKnown RBP eCLIP17.34■□□□□ 0.37
NEK3-208ENST00000618534 TUSC5Q8IXB3 177 aa17.34■□□□□ 0.37
NEK3-208ENST00000618534 CA5BP1Q8WTZ4 195 aa17.34■□□□□ 0.37
NEK3-208ENST00000618534 CABLES2Q9BTV7 478 aa17.34■□□□□ 0.37
NEK3-208ENST00000618534 LINC00470Q9BZP3 86 aa17.34■□□□□ 0.37
NEK3-208ENST00000618534 CD300LBA8K4G0 201 aa17.33■□□□□ 0.37
NEK3-208ENST00000618534 CYB5R3P00387 301 aaPredicted RBP17.33■□□□□ 0.37
NEK3-208ENST00000618534 CYB561P49447 251 aa17.33■□□□□ 0.37
NEK3-208ENST00000618534 ZNF880Q6PDB4 577 aa17.33■□□□□ 0.37
NEK3-208ENST00000618534 OR10V1Q8NGI7 309 aa17.33■□□□□ 0.37
NEK3-208ENST00000618534 OR5P3Q8WZ94 311 aa17.33■□□□□ 0.37
NEK3-208ENST00000618534 RCC1LQ96I51 464 aaKnown RBP17.33■□□□□ 0.37
NEK3-208ENST00000618534 SSX3Q99909 188 aa17.33■□□□□ 0.37
NEK3-208ENST00000618534 PLK3Q9H4B4 646 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms