RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 CR1LQ2VPA4 569 aa14.96□□□□□ -0.01
VRK3-225ENST00000601912 TOMM40LQ969M1 308 aa14.96□□□□□ -0.01
VRK3-225ENST00000601912 ARL11Q969Q4 196 aa14.96□□□□□ -0.01
VRK3-225ENST00000601912 SEC22CQ9BRL7 303 aa14.96□□□□□ -0.01
VRK3-225ENST00000601912 MED28Q9H204 178 aa14.96□□□□□ -0.01
VRK3-225ENST00000601912 C5orf66Q9H5L9 145 aa14.96□□□□□ -0.01
VRK3-225ENST00000601912 KIAA2026Q5HYC2 2103 aa14.95□□□□□ -0.02
VRK3-225ENST00000601912 TRGV10A0A0A0MS01 117 aa14.95□□□□□ -0.02
VRK3-225ENST00000601912 OVOL3O00110 214 aa14.95□□□□□ -0.02
VRK3-225ENST00000601912 PPIHO43447 177 aaKnown RBP14.95□□□□□ -0.02
VRK3-225ENST00000601912 SSNA1O43805 119 aa14.95□□□□□ -0.02
VRK3-225ENST00000601912 AKR1C4P17516 323 aa14.95□□□□□ -0.02
VRK3-225ENST00000601912 TMEM33P57088 247 aa14.95□□□□□ -0.02
VRK3-225ENST00000601912 UBE2MP61081 183 aaKnown RBP14.95□□□□□ -0.02
VRK3-225ENST00000601912 RRAS2P62070 204 aaPredicted RBP14.95□□□□□ -0.02
VRK3-225ENST00000601912 LPCAT3Q6P1A2 487 aa14.95□□□□□ -0.02
VRK3-225ENST00000601912 LYPD2Q6UXB3 125 aa14.95□□□□□ -0.02
VRK3-225ENST00000601912 CAPSLQ8WWF8 208 aa14.95□□□□□ -0.02
VRK3-225ENST00000601912 ZNF69Q9UC07 566 aa14.95□□□□□ -0.02
VRK3-225ENST00000601912 LRBAP50851 2863 aa14.94□□□□□ -0.02
VRK3-225ENST00000601912 TUSC2O75896 110 aa14.94□□□□□ -0.02
VRK3-225ENST00000601912 CTSDP07339 412 aaPredicted RBP14.94□□□□□ -0.02
VRK3-225ENST00000601912 TMEM128Q5BJH2 165 aa14.94□□□□□ -0.02
VRK3-225ENST00000601912 ZNF626Q68DY1 528 aa14.94□□□□□ -0.02
VRK3-225ENST00000601912 AKAP14Q86UN6 197 aa14.94□□□□□ -0.02
VRK3-225ENST00000601912 H1FOOQ8IZA3 346 aaPredicted RBP14.94□□□□□ -0.02
VRK3-225ENST00000601912 SLC38A6Q8IZM9 456 aa14.94□□□□□ -0.02
VRK3-225ENST00000601912 ADAD2Q8NCV1 583 aaKnown RBP14.94□□□□□ -0.02
VRK3-225ENST00000601912 OR1L1Q8NH94 360 aa14.94□□□□□ -0.02
VRK3-225ENST00000601912 UBALD1Q8TB05 177 aa14.94□□□□□ -0.02
VRK3-225ENST00000601912 NINJ1Q92982 152 aa14.94□□□□□ -0.02
VRK3-225ENST00000601912 CCL19Q99731 98 aa14.94□□□□□ -0.02
VRK3-225ENST00000601912 RTBDNQ9BSG5 229 aaPredicted RBP14.94□□□□□ -0.02
VRK3-225ENST00000601912 DCTN5Q9BTE1 182 aa14.94□□□□□ -0.02
VRK3-225ENST00000601912 FXYD6Q9H0Q3 95 aa14.94□□□□□ -0.02
VRK3-225ENST00000601912 OR2W1Q9Y3N9 320 aa14.94□□□□□ -0.02
VRK3-225ENST00000601912 LRRK2Q5S007 2527 aa14.94□□□□□ -0.02
VRK3-225ENST00000601912 hADV38S2A0JD32 116 aa14.93□□□□□ -0.02
VRK3-225ENST00000601912 HEXAP06865 529 aa14.93□□□□□ -0.02
VRK3-225ENST00000601912 PI3P19957 117 aa14.93□□□□□ -0.02
VRK3-225ENST00000601912 SSTR5P35346 364 aa14.93□□□□□ -0.02
VRK3-225ENST00000601912 CEACAM6P40199 344 aa14.93□□□□□ -0.02
VRK3-225ENST00000601912 ABCA11PQ4W5N1 156 aa14.93□□□□□ -0.02
VRK3-225ENST00000601912 AVPI1Q5T686 147 aa14.93□□□□□ -0.02
VRK3-225ENST00000601912 CD276Q5ZPR3 534 aa14.93□□□□□ -0.02
VRK3-225ENST00000601912 ZNF431Q8TF32 576 aaPredicted RBP14.93□□□□□ -0.02
VRK3-225ENST00000601912 NEURL2Q9BR09 285 aa14.93□□□□□ -0.02
VRK3-225ENST00000601912 OR1A1Q9P1Q5 309 aa14.93□□□□□ -0.02
VRK3-225ENST00000601912 DVL1O14640 695 aa14.93□□□□□ -0.02
VRK3-225ENST00000601912 HLA-AP01891 365 aaKnown RBP14.93□□□□□ -0.02
VRK3-225ENST00000601912 MEF2CQ06413 473 aaPredicted RBP14.93□□□□□ -0.02
VRK3-225ENST00000601912 TMEM155Q4W5P6 130 aa14.93□□□□□ -0.02
VRK3-225ENST00000601912 OR52B4Q8NGK2 314 aa14.93□□□□□ -0.02
VRK3-225ENST00000601912 OR2S2Q9NQN1 319 aa14.93□□□□□ -0.02
VRK3-225ENST00000601912 RDH8Q9NYR8 311 aa14.93□□□□□ -0.02
VRK3-225ENST00000601912 LPAR3Q9UBY5 353 aa14.93□□□□□ -0.02
VRK3-225ENST00000601912 ZNF221Q9UK13 617 aa14.93□□□□□ -0.02
VRK3-225ENST00000601912 MEX3AA1L020 520 aaKnown RBP14.92□□□□□ -0.02
VRK3-225ENST00000601912 C15orf65H3BRN8 121 aa14.92□□□□□ -0.02
VRK3-225ENST00000601912 CCNKO75909 580 aa14.92□□□□□ -0.02
VRK3-225ENST00000601912 VAMP1P23763 118 aa14.92□□□□□ -0.02
VRK3-225ENST00000601912 RPL31P62899 125 aaKnown RBP14.92□□□□□ -0.02
VRK3-225ENST00000601912 HTD2P86397 168 aa14.92□□□□□ -0.02
VRK3-225ENST00000601912 DHRS2Q13268 280 aa14.92□□□□□ -0.02
VRK3-225ENST00000601912 PPP1R1AQ13522 171 aa14.92□□□□□ -0.02
VRK3-225ENST00000601912 C11orf88Q6PI97 169 aa14.92□□□□□ -0.02
VRK3-225ENST00000601912 NLRC3Q7RTR2 1065 aa14.92□□□□□ -0.02
VRK3-225ENST00000601912 LYG2Q86SG7 212 aa14.92□□□□□ -0.02
VRK3-225ENST00000601912 SPICQ8N5J4 248 aa14.92□□□□□ -0.02
VRK3-225ENST00000601912 RFESDQ8TAC1 157 aa14.92□□□□□ -0.02
VRK3-225ENST00000601912 SECTM1Q8WVN6 248 aa14.92□□□□□ -0.02
VRK3-225ENST00000601912 CORO2AQ92828 525 aa14.92□□□□□ -0.02
VRK3-225ENST00000601912 PPP1R14BQ96C90 147 aa14.92□□□□□ -0.02
VRK3-225ENST00000601912 ZNF486Q96H40 463 aaPredicted RBP14.92□□□□□ -0.02
VRK3-225ENST00000601912 SLC5A7Q9GZV3 580 aa14.92□□□□□ -0.02
VRK3-225ENST00000601912 CTSZQ9UBR2 303 aa14.92□□□□□ -0.02
VRK3-225ENST00000601912 MIOXQ9UGB7 285 aa14.92□□□□□ -0.02
VRK3-225ENST00000601912 USF3Q68DE3 2245 aa14.92□□□□□ -0.02
VRK3-225ENST00000601912 NDUFS7O75251 213 aa14.91□□□□□ -0.02
VRK3-225ENST00000601912 RPS2P15880 293 aaKnown RBP14.91□□□□□ -0.02
VRK3-225ENST00000601912 LUMP51884 338 aaPredicted RBP14.91□□□□□ -0.02
VRK3-225ENST00000601912 DHODHQ02127 395 aa14.91□□□□□ -0.02
VRK3-225ENST00000601912 IGFBPL1Q8WX77 278 aa14.91□□□□□ -0.02
VRK3-225ENST00000601912 H1FXQ92522 213 aaKnown RBP14.91□□□□□ -0.02
VRK3-225ENST00000601912 RSRP1Q9BUV0 290 aa14.91□□□□□ -0.02
VRK3-225ENST00000601912 CALYQ9NYX4 217 aa14.91□□□□□ -0.02
VRK3-225ENST00000601912 UBE2J1Q9Y385 318 aaPredicted RBP14.91□□□□□ -0.02
VRK3-225ENST00000601912 RBM7Q9Y580 266 aaKnown RBP14.91□□□□□ -0.02
VRK3-225ENST00000601912 LINC00312Q9Y6C7 94 aa14.91□□□□□ -0.02
VRK3-225ENST00000601912 KBTBD11-OT1A0A1B0GTJ5 212 aa14.9□□□□□ -0.02
VRK3-225ENST00000601912 C9orf170A2RU37 121 aa14.9□□□□□ -0.02
VRK3-225ENST00000601912 ZNF729A6NN14 1252 aaPredicted RBP14.9□□□□□ -0.02
VRK3-225ENST00000601912 GPR6P46095 362 aaPredicted RBP14.9□□□□□ -0.02
VRK3-225ENST00000601912 PIGPP57054 158 aa14.9□□□□□ -0.02
VRK3-225ENST00000601912 FGFRL1Q8N441 504 aa14.9□□□□□ -0.02
VRK3-225ENST00000601912 CCDC71LQ8N9Z2 235 aa14.9□□□□□ -0.02
VRK3-225ENST00000601912 OR52L2PQ8NGH6 319 aa14.9□□□□□ -0.02
VRK3-225ENST00000601912 OR10V1Q8NGI7 309 aa14.9□□□□□ -0.02
VRK3-225ENST00000601912 TMEM230Q96A57 120 aa14.9□□□□□ -0.02
VRK3-225ENST00000601912 CLN8Q9UBY8 286 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms