RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 CGB7P0DN87 165 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 OMGP23515 440 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 PRSS3P35030 304 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 TAS2R20P59543 309 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 LTC4SQ16873 150 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 OLFML2AQ68BL7 652 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 C1orf229Q6ZS94 237 aaPredicted RBP13.67□□□□□ -0.22
USHBP1-210ENST00000600286 IL17RELQ6ZVW7 336 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 IZUMO1Q8IYV9 350 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 PNKDQ8N490 385 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 C11orf42Q8N5U0 333 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 OR52M1Q8NGK5 317 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 DIRAS2Q96HU8 199 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 HDHD3Q9BSH5 251 aaPredicted RBP13.67□□□□□ -0.22
USHBP1-210ENST00000600286 SUCNR1Q9BXA5 334 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 ZNF286AQ9HBT8 521 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 Q9N2K0 584 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 GNG12Q9UBI6 72 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 EXTL2Q9UBQ6 330 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 KCNK7Q9Y2U2 307 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 JMJD1CQ15652 2540 aa13.66□□□□□ -0.22
USHBP1-210ENST00000600286 FBN1P35555 2871 aaKnown RBP13.66□□□□□ -0.22
USHBP1-210ENST00000600286 IGHV1-69DA0A0B4J2H0 117 aa13.66□□□□□ -0.22
USHBP1-210ENST00000600286 CENPVL3A0A0U1RRI6 287 aa13.66□□□□□ -0.22
USHBP1-210ENST00000600286 A6NHS1 94 aa13.66□□□□□ -0.22
USHBP1-210ENST00000600286 TRDCB7Z8K6 153 aa13.66□□□□□ -0.22
USHBP1-210ENST00000600286 C12orf77C9JDV5 145 aa13.66□□□□□ -0.22
USHBP1-210ENST00000600286 SDCBPO00560 298 aaPredicted RBP13.66□□□□□ -0.22
USHBP1-210ENST00000600286 CRLF1O75462 422 aa13.66□□□□□ -0.22
USHBP1-210ENST00000600286 IGHV1-69P01742 117 aa13.66□□□□□ -0.22
USHBP1-210ENST00000600286 MELTFP08582 738 aa13.66□□□□□ -0.22
USHBP1-210ENST00000600286 FCGR3AP08637 254 aa13.66□□□□□ -0.22
USHBP1-210ENST00000600286 COX7A1P24310 79 aa13.66□□□□□ -0.22
USHBP1-210ENST00000600286 SSTR5P35346 364 aa13.66□□□□□ -0.22
USHBP1-210ENST00000600286 SRSF7Q16629 238 aaKnown RBP eCLIP13.66□□□□□ -0.22
USHBP1-210ENST00000600286 ZNF880Q6PDB4 577 aa13.66□□□□□ -0.22
USHBP1-210ENST00000600286 PDZD9Q8IXQ8 264 aa13.66□□□□□ -0.22
USHBP1-210ENST00000600286 ABHD12Q8N2K0 398 aa13.66□□□□□ -0.22
USHBP1-210ENST00000600286 ZNF596Q8TC21 504 aa13.66□□□□□ -0.22
USHBP1-210ENST00000600286 CREB3L1Q96BA8 519 aa13.66□□□□□ -0.22
USHBP1-210ENST00000600286 ST6GALNAC5Q9BVH7 336 aa13.66□□□□□ -0.22
USHBP1-210ENST00000600286 CLEC7AQ9BXN2 247 aa13.66□□□□□ -0.22
USHBP1-210ENST00000600286 FAM96BQ9Y3D0 163 aa13.66□□□□□ -0.22
USHBP1-210ENST00000600286 IGHV3OR16-10A0A075B7F0 116 aa13.65□□□□□ -0.22
USHBP1-210ENST00000600286 RNASEK-C17orf49H0YIS7 233 aa13.65□□□□□ -0.22
USHBP1-210ENST00000600286 C15orf65H3BRN8 121 aa13.65□□□□□ -0.22
USHBP1-210ENST00000600286 HSPA12AO43301 675 aa13.65□□□□□ -0.22
USHBP1-210ENST00000600286 HLA-DRB3P79483 266 aa13.65□□□□□ -0.22
USHBP1-210ENST00000600286 HTD2P86397 168 aa13.65□□□□□ -0.22
USHBP1-210ENST00000600286 MIDNQ504T8 468 aa13.65□□□□□ -0.22
USHBP1-210ENST00000600286 STEAP3Q658P3 488 aa13.65□□□□□ -0.22
USHBP1-210ENST00000600286 RBMS3Q6XE24 437 aaKnown RBP13.65□□□□□ -0.22
USHBP1-210ENST00000600286 DTX3Q8N9I9 347 aa13.65□□□□□ -0.22
USHBP1-210ENST00000600286 IL1F10Q8WWZ1 152 aa13.65□□□□□ -0.22
USHBP1-210ENST00000600286 TNFRSF14Q92956 283 aa13.65□□□□□ -0.22
USHBP1-210ENST00000600286 KIRREL1Q96J84 757 aa13.65□□□□□ -0.22
USHBP1-210ENST00000600286 NXF2Q9GZY0 626 aaKnown RBP13.65□□□□□ -0.22
USHBP1-210ENST00000600286 IFT46Q9NQC8 304 aa13.65□□□□□ -0.22
USHBP1-210ENST00000600286 OR2S2Q9NQN1 319 aa13.65□□□□□ -0.22
USHBP1-210ENST00000600286 F2RL2O00254 374 aa13.64□□□□□ -0.23
USHBP1-210ENST00000600286 NPFFO15130 113 aa13.64□□□□□ -0.23
USHBP1-210ENST00000600286 ARG1P05089 322 aa13.64□□□□□ -0.23
USHBP1-210ENST00000600286 FAM157CP0CG43 387 aa13.64□□□□□ -0.23
USHBP1-210ENST00000600286 IGHV4-38-2P0DP08 117 aa13.64□□□□□ -0.23
USHBP1-210ENST00000600286 EPHA1P21709 976 aa13.64□□□□□ -0.23
USHBP1-210ENST00000600286 KLRD1Q13241 179 aa13.64□□□□□ -0.23
USHBP1-210ENST00000600286 HMGN3Q15651 99 aa13.64□□□□□ -0.23
USHBP1-210ENST00000600286 Q3ZCU0 254 aa13.64□□□□□ -0.23
USHBP1-210ENST00000600286 KLF17Q5JT82 389 aaPredicted RBP13.64□□□□□ -0.23
USHBP1-210ENST00000600286 CNIH2Q6PI25 160 aa13.64□□□□□ -0.23
USHBP1-210ENST00000600286 SNX29P2Q8IUI4 249 aa13.64□□□□□ -0.23
USHBP1-210ENST00000600286 LAX1Q8IWV1 398 aa13.64□□□□□ -0.23
USHBP1-210ENST00000600286 OR11H6Q8NGC7 330 aa13.64□□□□□ -0.23
USHBP1-210ENST00000600286 OR4A4PQ8NGN8 299 aa13.64□□□□□ -0.23
USHBP1-210ENST00000600286 OR9G1Q8NH87 305 aa13.64□□□□□ -0.23
USHBP1-210ENST00000600286 OR1L1Q8NH94 360 aa13.64□□□□□ -0.23
USHBP1-210ENST00000600286 NUDCD2Q8WVJ2 157 aa13.64□□□□□ -0.23
USHBP1-210ENST00000600286 SCPEP1Q9HB40 452 aa13.64□□□□□ -0.23
USHBP1-210ENST00000600286 GFOD1Q9NXC2 390 aa13.64□□□□□ -0.23
USHBP1-210ENST00000600286 JPT1Q9UK76 154 aa13.64□□□□□ -0.23
USHBP1-210ENST00000600286 SONP18583 2426 aaKnown RBP13.64□□□□□ -0.23
USHBP1-210ENST00000600286 SVEP1Q4LDE5 3571 aa13.63□□□□□ -0.23
USHBP1-210ENST00000600286 IGHV2-26A0A0B4J1V2 119 aa13.63□□□□□ -0.23
USHBP1-210ENST00000600286 A0A1W2PRD5 423 aa13.63□□□□□ -0.23
USHBP1-210ENST00000600286 A0A1W2PRF3 423 aa13.63□□□□□ -0.23
USHBP1-210ENST00000600286 A0A1W2PRM7 423 aa13.63□□□□□ -0.23
USHBP1-210ENST00000600286 MEIOCA2RUB1 952 aa13.63□□□□□ -0.23
USHBP1-210ENST00000600286 SULT1C2O00338 296 aa13.63□□□□□ -0.23
USHBP1-210ENST00000600286 FABP7O15540 132 aa13.63□□□□□ -0.23
USHBP1-210ENST00000600286 MMP23AO75900 390 aa13.63□□□□□ -0.23
USHBP1-210ENST00000600286 FSHBP01225 129 aa13.63□□□□□ -0.23
USHBP1-210ENST00000600286 CTXN2P0C2S0 81 aa13.63□□□□□ -0.23
USHBP1-210ENST00000600286 ZBTB25P24278 435 aa13.63□□□□□ -0.23
USHBP1-210ENST00000600286 CD34P28906 385 aa13.63□□□□□ -0.23
USHBP1-210ENST00000600286 UBALD1Q8TB05 177 aa13.63□□□□□ -0.23
USHBP1-210ENST00000600286 OCSTAMPQ9BR26 566 aa13.63□□□□□ -0.23
USHBP1-210ENST00000600286 MIXL1Q9H2W2 232 aa13.63□□□□□ -0.23
USHBP1-210ENST00000600286 ZNF230Q9UIE0 474 aaPredicted RBP13.63□□□□□ -0.23
USHBP1-210ENST00000600286 ELF5Q9UKW6 265 aaPredicted RBP13.63□□□□□ -0.23
USHBP1-210ENST00000600286 TBL2Q9Y4P3 447 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms