RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 PRSS48Q7RTY5 328 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 PNKDQ8N490 385 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 ARIH2OSQ8N7S6 290 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 GATD1Q8NB37 220 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 SLC26A10Q8NG04 563 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 OR4M2Q8NGB6 313 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 OR13D1Q8NGV5 346 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 OR51Q1Q8NH59 317 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 TNFAIP8L1Q8WVP5 186 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 FGGYQ96C11 551 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 DDIT4LQ96D03 193 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 GABRG3Q99928 467 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 C2orf88Q9BSF0 95 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 OR11A1Q9GZK7 315 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 ARV1Q9H2C2 271 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 UGT1A8Q9HAW9 530 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 ESM1Q9NQ30 184 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 MEPEQ9NQ76 525 aaPredicted RBP3.63□□□□□ -1.83
SMAD4-216ENST00000593223 GSKIPQ9P0R6 139 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 PRO0628Q9UI54 55 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 VPREB3Q9UKI3 123 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 MOKQ9UQ07 419 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 TRAPPC4Q9Y296 219 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 MYH2Q9UKX2 1941 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 ZBED9Q6R2W3 1325 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 ASCC3Q8N3C0 2202 aaKnown RBP3.63□□□□□ -1.83
SMAD4-216ENST00000593223 ATG2BQ96BY7 2078 aa3.63□□□□□ -1.83
SMAD4-216ENST00000593223 CEACAM18A8MTB9 384 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 A8MU10 97 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 ANKRD65E5RJM6 399 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 LOC110117498-PIK3R3F6TDL0 507 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 TNFRSF11BO00300 401 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 SAP18O00422 153 aaKnown RBP3.62□□□□□ -1.83
SMAD4-216ENST00000593223 FCN1O00602 326 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 MGRN1O60291 552 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 EIF1BO60739 113 aaKnown RBP3.62□□□□□ -1.83
SMAD4-216ENST00000593223 S1PR2O95136 353 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 CYB5R3P00387 301 aaPredicted RBP3.62□□□□□ -1.83
SMAD4-216ENST00000593223 CTSLP07711 333 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 GIPP09681 153 aaPredicted RBP3.62□□□□□ -1.83
SMAD4-216ENST00000593223 DNAH10OSP0CZ25 163 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 SDC1P18827 310 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 SLC2A5P22732 501 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 S100GP29377 79 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 GRPRP30550 384 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 EIF1P41567 113 aaKnown RBP3.62□□□□□ -1.83
SMAD4-216ENST00000593223 CXCL12P48061 93 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 SLC7A9P82251 487 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 ZNF235Q14590 738 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 SLC10A1Q14973 349 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 LRRC75BQ2VPJ9 315 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 PRSS41Q7RTY9 318 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 ANGPTL5Q86XS5 388 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 DAW1Q8N136 415 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 SVOPLQ8N434 492 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 ATPAF2Q8N5M1 289 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 ZNF676Q8N7Q3 588 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 OR2Z1Q8NG97 314 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 OR4C13Q8NGP0 309 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 ZFAND1Q8TCF1 268 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 VN1R17PQ8TDU5 208 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 EEF1AKMT3Q96AZ1 226 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 HAUS1Q96CS2 278 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 ZMYND19Q96E35 227 aaPredicted RBP3.62□□□□□ -1.83
SMAD4-216ENST00000593223 SIGMAR1Q99720 223 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 OSBPL11Q9BXB4 747 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 OR51J1Q9H342 316 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 ZSCAN16Q9H4T2 348 aaPredicted RBP3.62□□□□□ -1.83
SMAD4-216ENST00000593223 DDIT4Q9NX09 232 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 ANGPT4Q9Y264 503 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 SIGLEC9Q9Y336 463 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 UFC1Q9Y3C8 167 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 L3MBTL1Q9Y468 752 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 SPTBN1Q01082 2364 aaKnown RBP3.62□□□□□ -1.83
SMAD4-216ENST00000593223 HIVEP3Q5T1R4 2406 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 DLG5Q8TDM6 1919 aa3.62□□□□□ -1.83
SMAD4-216ENST00000593223 MUC22E2RYF6 1773 aaPredicted RBP3.61□□□□□ -1.83
SMAD4-216ENST00000593223 IGHV3OR16-12A0A075B7B8 117 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 FAM168BA1KXE4 195 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 B4DXG7 233 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 GPR31O00270 319 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 NME4O00746 187 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 ICOSLGO75144 302 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 TTC4O95801 387 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 MT-CO2P00403 227 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 PGAM2P15259 253 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 SDC4P31431 198 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 FABP6P51161 128 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 EFNA3P52797 238 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 HIST1H3AP68431 136 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 H3F3AP84243 136 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 FMODQ06828 376 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 ZNF154Q13106 437 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 HTR4Q13639 388 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 CLINT1Q14677 625 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 IRF4Q15306 451 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 C4orf26Q17RF5 130 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 MICAQ29983 383 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 FAM120AOSQ5T036 256 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 FAM78BQ5VT40 261 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms