RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 CYYR1Q96J86 154 aa16.87■□□□□ 0.29
CSNK1D-215ENST00000580784 TRAPPC2LQ9UL33 140 aa16.87■□□□□ 0.29
CSNK1D-215ENST00000580784 ERGIC3Q9Y282 383 aa16.87■□□□□ 0.29
CSNK1D-215ENST00000580784 PEX16Q9Y5Y5 336 aa16.87■□□□□ 0.29
CSNK1D-215ENST00000580784 IGHV3-72A0A0B4J1Y9 119 aa16.86■□□□□ 0.29
CSNK1D-215ENST00000580784 PSMB11A5LHX3 300 aa16.86■□□□□ 0.29
CSNK1D-215ENST00000580784 C12orf77C9JDV5 145 aa16.86■□□□□ 0.29
CSNK1D-215ENST00000580784 CRTAPO75718 401 aaPredicted RBP16.86■□□□□ 0.29
CSNK1D-215ENST00000580784 IGLL1P15814 213 aa16.86■□□□□ 0.29
CSNK1D-215ENST00000580784 KHDC1LQ5JSQ8 128 aa16.86■□□□□ 0.29
CSNK1D-215ENST00000580784 ZNF329Q86UD4 541 aa16.86■□□□□ 0.29
CSNK1D-215ENST00000580784 C8orf31Q8N9H6 132 aa16.86■□□□□ 0.29
CSNK1D-215ENST00000580784 PHF21AQ96BD5 680 aa16.86■□□□□ 0.29
CSNK1D-215ENST00000580784 NOL4LQ96MY1 436 aaPredicted RBP16.86■□□□□ 0.29
CSNK1D-215ENST00000580784 UBE2QL1A1L167 161 aa16.85■□□□□ 0.29
CSNK1D-215ENST00000580784 SLC31A2O15432 143 aa16.85■□□□□ 0.29
CSNK1D-215ENST00000580784 FGF16O43320 207 aa16.85■□□□□ 0.29
CSNK1D-215ENST00000580784 RCC1P18754 421 aaPredicted RBP16.85■□□□□ 0.29
CSNK1D-215ENST00000580784 EBI3Q14213 229 aa16.85■□□□□ 0.29
CSNK1D-215ENST00000580784 SIGIRRQ6IA17 410 aa16.85■□□□□ 0.29
CSNK1D-215ENST00000580784 Q6ZPA2 131 aa16.85■□□□□ 0.29
CSNK1D-215ENST00000580784 REC114Q7Z4M0 266 aa16.85■□□□□ 0.29
CSNK1D-215ENST00000580784 GAPTQ8N292 157 aa16.85■□□□□ 0.29
CSNK1D-215ENST00000580784 PRR18Q8N4B5 295 aa16.85■□□□□ 0.29
CSNK1D-215ENST00000580784 ST6GALNAC6Q969X2 333 aa16.85■□□□□ 0.29
CSNK1D-215ENST00000580784 EAF1Q96JC9 268 aaPredicted RBP16.85■□□□□ 0.29
CSNK1D-215ENST00000580784 Q96M66 194 aa16.85■□□□□ 0.29
CSNK1D-215ENST00000580784 LINC00527Q9UJ94 153 aa16.85■□□□□ 0.29
CSNK1D-215ENST00000580784 FAM90A10PA6NDY2 464 aa16.84■□□□□ 0.29
CSNK1D-215ENST00000580784 FAM90A7PA6NKC0 464 aa16.84■□□□□ 0.29
CSNK1D-215ENST00000580784 FAM90A23PA8MXZ1 464 aa16.84■□□□□ 0.29
CSNK1D-215ENST00000580784 PTGES3LE9PB15 166 aa16.84■□□□□ 0.29
CSNK1D-215ENST00000580784 SPINT2O43291 252 aa16.84■□□□□ 0.29
CSNK1D-215ENST00000580784 HBZP02008 142 aa16.84■□□□□ 0.29
CSNK1D-215ENST00000580784 PF4P02776 101 aa16.84■□□□□ 0.29
CSNK1D-215ENST00000580784 CDK1P06493 297 aa16.84■□□□□ 0.29
CSNK1D-215ENST00000580784 FUT3P21217 361 aa16.84■□□□□ 0.29
CSNK1D-215ENST00000580784 MAPK3P27361 379 aaPredicted RBP16.84■□□□□ 0.29
CSNK1D-215ENST00000580784 ZNF134P52741 427 aa16.84■□□□□ 0.29
CSNK1D-215ENST00000580784 GP2P55259 537 aaKnown RBP16.84■□□□□ 0.29
CSNK1D-215ENST00000580784 ACSM3Q53FZ2 586 aa16.84■□□□□ 0.29
CSNK1D-215ENST00000580784 UNQ9370/PRO34162Q6UXP9 181 aa16.84■□□□□ 0.29
CSNK1D-215ENST00000580784 NKAIN3Q8N8D7 197 aa16.84■□□□□ 0.29
CSNK1D-215ENST00000580784 OR1L1Q8NH94 360 aa16.84■□□□□ 0.29
CSNK1D-215ENST00000580784 RTN4IP1Q8WWV3 396 aaPredicted RBP16.84■□□□□ 0.29
CSNK1D-215ENST00000580784 FAM46BQ96A09 425 aa16.84■□□□□ 0.29
CSNK1D-215ENST00000580784 UQCC2Q9BRT2 126 aa16.84■□□□□ 0.29
CSNK1D-215ENST00000580784 VCXQ9H320 206 aa16.84■□□□□ 0.29
CSNK1D-215ENST00000580784 NECAP2Q9NVZ3 263 aa16.84■□□□□ 0.29
CSNK1D-215ENST00000580784 NKX1-2Q9UD57 310 aaPredicted RBP16.84■□□□□ 0.29
CSNK1D-215ENST00000580784 LINC01548A6NM66 108 aa16.83■□□□□ 0.28
CSNK1D-215ENST00000580784 SERPINE3A8MV23 424 aa16.83■□□□□ 0.28
CSNK1D-215ENST00000580784 SC5DO75845 299 aa16.83■□□□□ 0.28
CSNK1D-215ENST00000580784 GABPB1Q06547 395 aaPredicted RBP16.83■□□□□ 0.28
CSNK1D-215ENST00000580784 CT45A1Q5HYN5 189 aa16.83■□□□□ 0.28
CSNK1D-215ENST00000580784 FAM27D1Q5T7N8 215 aa16.83■□□□□ 0.28
CSNK1D-215ENST00000580784 FOXB2Q5VYV0 432 aa16.83■□□□□ 0.28
CSNK1D-215ENST00000580784 Q8N6K4 173 aa16.83■□□□□ 0.28
CSNK1D-215ENST00000580784 ZNF439Q8NDP4 499 aa16.83■□□□□ 0.28
CSNK1D-215ENST00000580784 OR10V1Q8NGI7 309 aa16.83■□□□□ 0.28
CSNK1D-215ENST00000580784 CT45A3Q8NHU0 189 aa16.83■□□□□ 0.28
CSNK1D-215ENST00000580784 CHPT1Q8WUD6 406 aa16.83■□□□□ 0.28
CSNK1D-215ENST00000580784 THRSPQ92748 146 aa16.83■□□□□ 0.28
CSNK1D-215ENST00000580784 RBMXL1Q96E39 390 aaKnown RBP16.83■□□□□ 0.28
CSNK1D-215ENST00000580784 GNG12Q9UBI6 72 aa16.83■□□□□ 0.28
CSNK1D-215ENST00000580784 NCBP2LA6PVI3 153 aaKnown RBP16.82■□□□□ 0.28
CSNK1D-215ENST00000580784 ZNF736B4DX44 427 aaPredicted RBP16.82■□□□□ 0.28
CSNK1D-215ENST00000580784 IGHG2P01859 326 aa16.82■□□□□ 0.28
CSNK1D-215ENST00000580784 IL3RAP26951 378 aa16.82■□□□□ 0.28
CSNK1D-215ENST00000580784 Q3ZCU0 254 aa16.82■□□□□ 0.28
CSNK1D-215ENST00000580784 C6orf141Q5SZD1 244 aa16.82■□□□□ 0.28
CSNK1D-215ENST00000580784 C6orf183Q5T699 404 aa16.82■□□□□ 0.28
CSNK1D-215ENST00000580784 RNLSQ5VYX0 342 aa16.82■□□□□ 0.28
CSNK1D-215ENST00000580784 SLC25A48Q6ZT89 311 aaKnown RBP16.82■□□□□ 0.28
CSNK1D-215ENST00000580784 C5orf24Q7Z6I8 188 aa16.82■□□□□ 0.28
CSNK1D-215ENST00000580784 SLC35E3Q7Z769 313 aa16.82■□□□□ 0.28
CSNK1D-215ENST00000580784 IZUMO1Q8IYV9 350 aa16.82■□□□□ 0.28
CSNK1D-215ENST00000580784 MS4A15Q8N5U1 240 aa16.82■□□□□ 0.28
CSNK1D-215ENST00000580784 OR2T10Q8NGZ9 312 aa16.82■□□□□ 0.28
CSNK1D-215ENST00000580784 TMED9Q9BVK6 235 aa16.82■□□□□ 0.28
CSNK1D-215ENST00000580784 MND1Q9BWT6 205 aa16.82■□□□□ 0.28
CSNK1D-215ENST00000580784 DCLRE1BQ9H816 532 aa16.82■□□□□ 0.28
CSNK1D-215ENST00000580784 AURKAIP1Q9NWT8 199 aaPredicted RBP16.82■□□□□ 0.28
CSNK1D-215ENST00000580784 H0YHG0 523 aa16.81■□□□□ 0.28
CSNK1D-215ENST00000580784 CA11O75493 328 aa16.81■□□□□ 0.28
CSNK1D-215ENST00000580784 GLAP06280 429 aa16.81■□□□□ 0.28
CSNK1D-215ENST00000580784 GPR50Q13585 617 aa16.81■□□□□ 0.28
CSNK1D-215ENST00000580784 LRRTM1Q86UE6 522 aa16.81■□□□□ 0.28
CSNK1D-215ENST00000580784 MRAPQ8TCY5 172 aa16.81■□□□□ 0.28
CSNK1D-215ENST00000580784 TAF9BQ9HBM6 251 aa16.81■□□□□ 0.28
CSNK1D-215ENST00000580784 RAB9BQ9NP90 201 aa16.81■□□□□ 0.28
CSNK1D-215ENST00000580784 GHRLQ9UBU3 117 aa16.81■□□□□ 0.28
CSNK1D-215ENST00000580784 LSM2Q9Y333 95 aaKnown RBP16.81■□□□□ 0.28
CSNK1D-215ENST00000580784 PDCD6O75340 191 aa16.8■□□□□ 0.28
CSNK1D-215ENST00000580784 MPIG6BO95866 241 aa16.8■□□□□ 0.28
CSNK1D-215ENST00000580784 CD1BP29016 333 aa16.8■□□□□ 0.28
CSNK1D-215ENST00000580784 SPHARQ15513 63 aa16.8■□□□□ 0.28
CSNK1D-215ENST00000580784 TMEM30BQ3MIR4 351 aa16.8■□□□□ 0.28
CSNK1D-215ENST00000580784 OR10K2Q6IF99 312 aa16.8■□□□□ 0.28
CSNK1D-215ENST00000580784 TRAT1Q6PIZ9 186 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms