RNA–Protein interactions for RNA: ENST00000574933.1

CCDC40-213, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 326 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-213ENST00000574933 UBE2E1P51965 193 aa14.85□□□□□ -0.03
CCDC40-213ENST00000574933 LOXL3P58215 753 aa14.85□□□□□ -0.03
CCDC40-213ENST00000574933 GUCA2AQ02747 115 aa14.85□□□□□ -0.03
CCDC40-213ENST00000574933 PRAMEF5Q5TYX0 476 aa14.85□□□□□ -0.03
CCDC40-213ENST00000574933 CNIH2Q6PI25 160 aa14.85□□□□□ -0.03
CCDC40-213ENST00000574933 BAIAP2L2Q6UXY1 529 aa14.85□□□□□ -0.03
CCDC40-213ENST00000574933 Q71RC1 249 aaPredicted RBP14.85□□□□□ -0.03
CCDC40-213ENST00000574933 C15orf40Q8WUR7 153 aa14.85□□□□□ -0.03
CCDC40-213ENST00000574933 NUDCD2Q8WVJ2 157 aa14.85□□□□□ -0.03
CCDC40-213ENST00000574933 SOSTQ9BQB4 213 aa14.85□□□□□ -0.03
CCDC40-213ENST00000574933 OCSTAMPQ9BR26 566 aa14.85□□□□□ -0.03
CCDC40-213ENST00000574933 TMEM133Q9H2Q1 129 aa14.85□□□□□ -0.03
CCDC40-213ENST00000574933 INAFM1C9JVW0 142 aa14.84□□□□□ -0.03
CCDC40-213ENST00000574933 DIRAS3O95661 229 aa14.84□□□□□ -0.03
CCDC40-213ENST00000574933 OMGP23515 440 aa14.84□□□□□ -0.03
CCDC40-213ENST00000574933 TNFSF8P32971 234 aa14.84□□□□□ -0.03
CCDC40-213ENST00000574933 TALDO1P37837 337 aa14.84□□□□□ -0.03
CCDC40-213ENST00000574933 HLA-DRB3P79483 266 aa14.84□□□□□ -0.03
CCDC40-213ENST00000574933 HTD2P86397 168 aa14.84□□□□□ -0.03
CCDC40-213ENST00000574933 TUSC1Q2TAM9 212 aa14.84□□□□□ -0.03
CCDC40-213ENST00000574933 Q3ZCU0 254 aa14.84□□□□□ -0.03
CCDC40-213ENST00000574933 GPR157Q5UAW9 335 aa14.84□□□□□ -0.03
CCDC40-213ENST00000574933 ZNF782Q6ZMW2 699 aaPredicted RBP14.84□□□□□ -0.03
CCDC40-213ENST00000574933 C9orf139Q6ZV77 190 aa14.84□□□□□ -0.03
CCDC40-213ENST00000574933 DTX3Q8N9I9 347 aa14.84□□□□□ -0.03
CCDC40-213ENST00000574933 OR11H6Q8NGC7 330 aa14.84□□□□□ -0.03
CCDC40-213ENST00000574933 OR1L1Q8NH94 360 aa14.84□□□□□ -0.03
CCDC40-213ENST00000574933 RFESDQ8TAC1 157 aa14.84□□□□□ -0.03
CCDC40-213ENST00000574933 LHX4Q969G2 390 aa14.84□□□□□ -0.03
CCDC40-213ENST00000574933 DIRAS2Q96HU8 199 aa14.84□□□□□ -0.03
CCDC40-213ENST00000574933 NUP50Q9UKX7 468 aa14.84□□□□□ -0.03
CCDC40-213ENST00000574933 ANAPC10Q9UM13 185 aa14.84□□□□□ -0.03
CCDC40-213ENST00000574933 TRAV40A0A0B4J280 105 aa14.83□□□□□ -0.04
CCDC40-213ENST00000574933 IGHV1-69DA0A0B4J2H0 117 aa14.83□□□□□ -0.04
CCDC40-213ENST00000574933 TRDCB7Z8K6 153 aa14.83□□□□□ -0.04
CCDC40-213ENST00000574933 SULT1C2O00338 296 aa14.83□□□□□ -0.04
CCDC40-213ENST00000574933 IGHV1-69P01742 117 aa14.83□□□□□ -0.04
CCDC40-213ENST00000574933 IGHV4-38-2P0DP08 117 aa14.83□□□□□ -0.04
CCDC40-213ENST00000574933 PTHLHP12272 177 aa14.83□□□□□ -0.04
CCDC40-213ENST00000574933 PRSS3P35030 304 aa14.83□□□□□ -0.04
CCDC40-213ENST00000574933 KIR2DS4P43632 304 aa14.83□□□□□ -0.04
CCDC40-213ENST00000574933 CBX5P45973 191 aa14.83□□□□□ -0.04
CCDC40-213ENST00000574933 DLX1P56177 255 aa14.83□□□□□ -0.04
CCDC40-213ENST00000574933 KIR2DS1Q14954 304 aa14.83□□□□□ -0.04
CCDC40-213ENST00000574933 CNPY1Q3B7I2 92 aa14.83□□□□□ -0.04
CCDC40-213ENST00000574933 LY6G6FQ5SQ64 297 aa14.83□□□□□ -0.04
CCDC40-213ENST00000574933 OR13D1Q8NGV5 346 aa14.83□□□□□ -0.04
CCDC40-213ENST00000574933 SCPEP1Q9HB40 452 aa14.83□□□□□ -0.04
CCDC40-213ENST00000574933 GFOD1Q9NXC2 390 aa14.83□□□□□ -0.04
CCDC40-213ENST00000574933 ANK3Q12955 4377 aaKnown RBP14.82□□□□□ -0.04
CCDC40-213ENST00000574933 ODF3BA8MYP8 253 aa14.82□□□□□ -0.04
CCDC40-213ENST00000574933 CRLF1O75462 422 aa14.82□□□□□ -0.04
CCDC40-213ENST00000574933 S100A5P33763 92 aa14.82□□□□□ -0.04
CCDC40-213ENST00000574933 KLRD1Q13241 179 aa14.82□□□□□ -0.04
CCDC40-213ENST00000574933 ZNF626Q68DY1 528 aa14.82□□□□□ -0.04
CCDC40-213ENST00000574933 PNKDQ8N490 385 aa14.82□□□□□ -0.04
CCDC40-213ENST00000574933 C8orf31Q8N9H6 132 aa14.82□□□□□ -0.04
CCDC40-213ENST00000574933 OR4A4PQ8NGN8 299 aa14.82□□□□□ -0.04
CCDC40-213ENST00000574933 OR6Q1Q8NGQ2 317 aa14.82□□□□□ -0.04
CCDC40-213ENST00000574933 SETD6Q8TBK2 473 aa14.82□□□□□ -0.04
CCDC40-213ENST00000574933 GPX8Q8TED1 209 aa14.82□□□□□ -0.04
CCDC40-213ENST00000574933 GALMQ96C23 342 aa14.82□□□□□ -0.04
CCDC40-213ENST00000574933 ABHD1Q96SE0 405 aa14.82□□□□□ -0.04
CCDC40-213ENST00000574933 CLEC7AQ9BXN2 247 aa14.82□□□□□ -0.04
CCDC40-213ENST00000574933 BEX2Q9BXY8 128 aa14.82□□□□□ -0.04
CCDC40-213ENST00000574933 ZNF286AQ9HBT8 521 aa14.82□□□□□ -0.04
CCDC40-213ENST00000574933 ZNF230Q9UIE0 474 aaPredicted RBP14.82□□□□□ -0.04
CCDC40-213ENST00000574933 JPT1Q9UK76 154 aa14.82□□□□□ -0.04
CCDC40-213ENST00000574933 MRPS7Q9Y2R9 242 aaKnown RBP14.82□□□□□ -0.04
CCDC40-213ENST00000574933 SVEP1Q4LDE5 3571 aa14.82□□□□□ -0.04
CCDC40-213ENST00000574933 IGHV2-26A0A0B4J1V2 119 aa14.81□□□□□ -0.04
CCDC40-213ENST00000574933 NAT1P18440 290 aa14.81□□□□□ -0.04
CCDC40-213ENST00000574933 CHRFAM7AQ494W8 412 aa14.81□□□□□ -0.04
CCDC40-213ENST00000574933 STEAP3Q658P3 488 aa14.81□□□□□ -0.04
CCDC40-213ENST00000574933 PYHIN1Q6K0P9 492 aa14.81□□□□□ -0.04
CCDC40-213ENST00000574933 IL17RELQ6ZVW7 336 aa14.81□□□□□ -0.04
CCDC40-213ENST00000574933 C5orf24Q7Z6I8 188 aa14.81□□□□□ -0.04
CCDC40-213ENST00000574933 CCDC190Q86UF4 302 aa14.81□□□□□ -0.04
CCDC40-213ENST00000574933 HOGA1Q86XE5 327 aa14.81□□□□□ -0.04
CCDC40-213ENST00000574933 UBALD1Q8TB05 177 aa14.81□□□□□ -0.04
CCDC40-213ENST00000574933 ZNF596Q8TC21 504 aa14.81□□□□□ -0.04
CCDC40-213ENST00000574933 CABLES2Q9BTV7 478 aa14.81□□□□□ -0.04
CCDC40-213ENST00000574933 SUCNR1Q9BXA5 334 aa14.81□□□□□ -0.04
CCDC40-213ENST00000574933 TOLLIPQ9H0E2 274 aa14.81□□□□□ -0.04
CCDC40-213ENST00000574933 IGKV1D-8A0A087WSZ0 117 aa14.8□□□□□ -0.04
CCDC40-213ENST00000574933 MEIOCA2RUB1 952 aa14.8□□□□□ -0.04
CCDC40-213ENST00000574933 SDCBPO00560 298 aaPredicted RBP14.8□□□□□ -0.04
CCDC40-213ENST00000574933 CTDSPLO15194 276 aa14.8□□□□□ -0.04
CCDC40-213ENST00000574933 FABP7O15540 132 aa14.8□□□□□ -0.04
CCDC40-213ENST00000574933 IGLV1-47P01700 117 aa14.8□□□□□ -0.04
CCDC40-213ENST00000574933 LPLP06858 475 aa14.8□□□□□ -0.04
CCDC40-213ENST00000574933 SCTP09683 121 aa14.8□□□□□ -0.04
CCDC40-213ENST00000574933 NFYBP25208 207 aa14.8□□□□□ -0.04
CCDC40-213ENST00000574933 PTBP1P26599 531 aaKnown RBP eCLIP14.8□□□□□ -0.04
CCDC40-213ENST00000574933 SRP14P37108 136 aaKnown RBP14.8□□□□□ -0.04
CCDC40-213ENST00000574933 ETV6P41212 452 aa14.8□□□□□ -0.04
CCDC40-213ENST00000574933 MRPS10P82664 201 aaKnown RBP14.8□□□□□ -0.04
CCDC40-213ENST00000574933 PRB3Q04118 309 aaPredicted RBP14.8□□□□□ -0.04
CCDC40-213ENST00000574933 MIDNQ504T8 468 aa14.8□□□□□ -0.04
CCDC40-213ENST00000574933 UTF1Q5T230 341 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms