RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 CHD3Q12873 2000 aaKnown RBP11.84□□□□□ -0.51
VPS33B-208ENST00000574755 C1QTNF9BB2RNN3 333 aa11.84□□□□□ -0.51
VPS33B-208ENST00000574755 FGF16O43320 207 aa11.84□□□□□ -0.51
VPS33B-208ENST00000574755 LMO1P25800 156 aa11.84□□□□□ -0.51
VPS33B-208ENST00000574755 CEACAM8P31997 349 aaPredicted RBP11.84□□□□□ -0.51
VPS33B-208ENST00000574755 MZT1Q08AG7 82 aa11.84□□□□□ -0.51
VPS33B-208ENST00000574755 GNMTQ14749 295 aa11.84□□□□□ -0.51
VPS33B-208ENST00000574755 CLEC9AQ6UXN8 241 aa11.84□□□□□ -0.51
VPS33B-208ENST00000574755 OR5D13Q8NGL4 314 aa11.84□□□□□ -0.51
VPS33B-208ENST00000574755 OR1S2Q8NGQ3 325 aa11.84□□□□□ -0.51
VPS33B-208ENST00000574755 RCL1Q9Y2P8 373 aaKnown RBP11.84□□□□□ -0.51
VPS33B-208ENST00000574755 SPEF1Q9Y4P9 236 aa11.84□□□□□ -0.51
VPS33B-208ENST00000574755 DUXBA0A1W2PPF3 345 aa11.83□□□□□ -0.52
VPS33B-208ENST00000574755 TMEM30CPA0ZSE6 113 aa11.83□□□□□ -0.52
VPS33B-208ENST00000574755 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.83□□□□□ -0.52
VPS33B-208ENST00000574755 ADAM20O43506 726 aa11.83□□□□□ -0.52
VPS33B-208ENST00000574755 JTBO76095 146 aa11.83□□□□□ -0.52
VPS33B-208ENST00000574755 PTBP3O95758 552 aaKnown RBP11.83□□□□□ -0.52
VPS33B-208ENST00000574755 VDAC1P21796 283 aa11.83□□□□□ -0.52
VPS33B-208ENST00000574755 TESK1Q15569 626 aa11.83□□□□□ -0.52
VPS33B-208ENST00000574755 HMGN3Q15651 99 aa11.83□□□□□ -0.52
VPS33B-208ENST00000574755 TUSC1Q2TAM9 212 aa11.83□□□□□ -0.52
VPS33B-208ENST00000574755 SMIM21Q3B7S5 101 aa11.83□□□□□ -0.52
VPS33B-208ENST00000574755 EIF5AL1Q6IS14 154 aaKnown RBP11.83□□□□□ -0.52
VPS33B-208ENST00000574755 LRP11Q86VZ4 500 aa11.83□□□□□ -0.52
VPS33B-208ENST00000574755 SPACA3Q8IXA5 215 aa11.83□□□□□ -0.52
VPS33B-208ENST00000574755 ERGIC1Q969X5 290 aa11.83□□□□□ -0.52
VPS33B-208ENST00000574755 KCNIP1Q9NZI2 227 aa11.83□□□□□ -0.52
VPS33B-208ENST00000574755 NUP50Q9UKX7 468 aa11.83□□□□□ -0.52
VPS33B-208ENST00000574755 TFF1P04155 84 aa11.83□□□□□ -0.52
VPS33B-208ENST00000574755 HOXD4P09016 255 aaPredicted RBP11.83□□□□□ -0.52
VPS33B-208ENST00000574755 CEACAM6P40199 344 aa11.83□□□□□ -0.52
VPS33B-208ENST00000574755 NKX2-1P43699 371 aaPredicted RBP11.83□□□□□ -0.52
VPS33B-208ENST00000574755 P2RY1P47900 373 aa11.83□□□□□ -0.52
VPS33B-208ENST00000574755 AESQ08117 197 aa11.83□□□□□ -0.52
VPS33B-208ENST00000574755 MSMPQ1L6U9 139 aa11.83□□□□□ -0.52
VPS33B-208ENST00000574755 VHLLQ6RSH7 139 aa11.83□□□□□ -0.52
VPS33B-208ENST00000574755 KCNS2Q9ULS6 477 aa11.83□□□□□ -0.52
VPS33B-208ENST00000574755 TMA7Q9Y2S6 64 aaKnown RBP11.83□□□□□ -0.52
VPS33B-208ENST00000574755 ZNF705EA8MWA4 302 aaPredicted RBP11.82□□□□□ -0.52
VPS33B-208ENST00000574755 PRRG2O14669 202 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 GPR137BO60478 399 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 GAPDHP04406 335 aaKnown RBP11.82□□□□□ -0.52
VPS33B-208ENST00000574755 SERPINE2P07093 398 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 GABRA2P47869 451 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 FAM27E3Q08E93 113 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 NMSQ5H8A3 153 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 GPR157Q5UAW9 335 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 CISD2Q8N5K1 135 aaKnown RBP11.82□□□□□ -0.52
VPS33B-208ENST00000574755 LRRC29Q8WV35 223 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 PIGMQ9H3S5 423 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 CADP27708 2225 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 A0A1B0GWJ7 208 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 A8MXE2 369 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 IGLV2-14P01704 120 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 HEXAP06865 529 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 OR8U9P0C7N5 309 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 FAM157CP0CG43 387 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 SLC35E4Q6ICL7 350 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 DMBX1Q8NFW5 382 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 OR8U1Q8NH10 309 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 PRR7Q8TB68 274 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 IL22RA2Q969J5 263 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 ZDHHC8Q9ULC8 765 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 PPP1R3CQ9UQK1 317 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 SSUH2Q9Y2M2 353 aa11.82□□□□□ -0.52
VPS33B-208ENST00000574755 PIEZO2Q9H5I5 2752 aa11.81□□□□□ -0.52
VPS33B-208ENST00000574755 FBXO24O75426 580 aa11.81□□□□□ -0.52
VPS33B-208ENST00000574755 PSG2P11465 335 aa11.81□□□□□ -0.52
VPS33B-208ENST00000574755 GLRXP35754 106 aa11.81□□□□□ -0.52
VPS33B-208ENST00000574755 OR3A1P47881 315 aa11.81□□□□□ -0.52
VPS33B-208ENST00000574755 KLF3P57682 345 aaPredicted RBP11.81□□□□□ -0.52
VPS33B-208ENST00000574755 COL10A1Q03692 680 aa11.81□□□□□ -0.52
VPS33B-208ENST00000574755 C3orf36Q3SXR2 165 aa11.81□□□□□ -0.52
VPS33B-208ENST00000574755 MARC2Q969Z3 335 aa11.81□□□□□ -0.52
VPS33B-208ENST00000574755 GALMQ96C23 342 aa11.81□□□□□ -0.52
VPS33B-208ENST00000574755 PARP12Q9H0J9 701 aaKnown RBP11.81□□□□□ -0.52
VPS33B-208ENST00000574755 LPAR3Q9UBY5 353 aa11.81□□□□□ -0.52
VPS33B-208ENST00000574755 CEP295Q9C0D2 2601 aa11.81□□□□□ -0.52
VPS33B-208ENST00000574755 OOEPA6NGQ2 149 aa11.81□□□□□ -0.52
VPS33B-208ENST00000574755 IGHV3-13P01766 116 aa11.81□□□□□ -0.52
VPS33B-208ENST00000574755 PVALBP20472 110 aaPredicted RBP11.81□□□□□ -0.52
VPS33B-208ENST00000574755 IL2RGP31785 369 aa11.81□□□□□ -0.52
VPS33B-208ENST00000574755 TDGF1P3P51864 188 aa11.81□□□□□ -0.52
VPS33B-208ENST00000574755 POLR2GP62487 172 aaKnown RBP eCLIP11.81□□□□□ -0.52
VPS33B-208ENST00000574755 DOLPP1Q86YN1 238 aa11.81□□□□□ -0.52
VPS33B-208ENST00000574755 BSCL2Q96G97 398 aaPredicted RBP11.81□□□□□ -0.52
VPS33B-208ENST00000574755 COQ2Q96H96 371 aa11.81□□□□□ -0.52
VPS33B-208ENST00000574755 AKR1E2Q96JD6 320 aa11.81□□□□□ -0.52
VPS33B-208ENST00000574755 METRNQ9UJH8 293 aa11.81□□□□□ -0.52
VPS33B-208ENST00000574755 ZGRF1Q86YA3 2104 aa11.8□□□□□ -0.52
VPS33B-208ENST00000574755 PIGBOS1A0A0B4J2F0 54 aa11.8□□□□□ -0.52
VPS33B-208ENST00000574755 CLEC18AA5D8T8 446 aa11.8□□□□□ -0.52
VPS33B-208ENST00000574755 ZSCAN5BA6NJL1 495 aa11.8□□□□□ -0.52
VPS33B-208ENST00000574755 C12orf77C9JDV5 145 aa11.8□□□□□ -0.52
VPS33B-208ENST00000574755 ATP6V1G2-DDX39BF2Z307 99 aa11.8□□□□□ -0.52
VPS33B-208ENST00000574755 IFNL4K9M1U5 179 aa11.8□□□□□ -0.52
VPS33B-208ENST00000574755 SSSCA1O60232 199 aa11.8□□□□□ -0.52
VPS33B-208ENST00000574755 CD200P41217 278 aa11.8□□□□□ -0.52
VPS33B-208ENST00000574755 CAV2P51636 162 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms