RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 DCHS2Q6V1P9 2916 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 FAM172BPA6NC97 362 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 HSPA12AO43301 675 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 PRAF2O60831 178 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 FCN3O75636 299 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 IL5P05113 134 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 HEXAP06865 529 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 WNT2P09544 360 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 PGAM2P15259 253 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 AADACP22760 399 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 ZBTB25P24278 435 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 UCP3P55916 312 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 ATP5J2P56134 94 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 RPL31P62899 125 aaKnown RBP11.33□□□□□ -0.6
CCDC40-209ENST00000573474 HTD2P86397 168 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 TATDN3Q17R31 274 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 ZNF841Q6ZN19 808 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 H1FOOQ8IZA3 346 aaPredicted RBP11.33□□□□□ -0.6
CCDC40-209ENST00000573474 ZNF525Q8N782 197 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 UBALD1Q8TB05 177 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 ZFAND1Q8TCF1 268 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 H1FXQ92522 213 aaKnown RBP11.33□□□□□ -0.6
CCDC40-209ENST00000573474 MOB3AQ96BX8 217 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 ALX4Q9H161 411 aaPredicted RBP11.33□□□□□ -0.6
CCDC40-209ENST00000573474 PATZ1Q9HBE1 687 aaKnown RBP11.33□□□□□ -0.6
CCDC40-209ENST00000573474 TAS2R3Q9NYW6 316 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 CALYQ9NYX4 217 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 ZNF69Q9UC07 566 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 SLC23A1Q9UHI7 598 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 GPR132Q9UNW8 380 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 UBE2J1Q9Y385 318 aaPredicted RBP11.33□□□□□ -0.6
CCDC40-209ENST00000573474 LINC00312Q9Y6C7 94 aa11.33□□□□□ -0.6
CCDC40-209ENST00000573474 USF3Q68DE3 2245 aa11.32□□□□□ -0.6
CCDC40-209ENST00000573474 TRBV23-1A0A0A0MS06 115 aa11.32□□□□□ -0.6
CCDC40-209ENST00000573474 KBTBD11-OT1A0A1B0GTJ5 212 aa11.32□□□□□ -0.6
CCDC40-209ENST00000573474 ZNF729A6NN14 1252 aaPredicted RBP11.32□□□□□ -0.6
CCDC40-209ENST00000573474 F5H0A9 414 aaPredicted RBP11.32□□□□□ -0.6
CCDC40-209ENST00000573474 F2RL2O00254 374 aa11.32□□□□□ -0.6
CCDC40-209ENST00000573474 PPYP01298 95 aa11.32□□□□□ -0.6
CCDC40-209ENST00000573474 ZNF728P0DKX0 622 aa11.32□□□□□ -0.6
CCDC40-209ENST00000573474 ANXA7P20073 488 aaKnown RBP11.32□□□□□ -0.6
CCDC40-209ENST00000573474 SSTR5P35346 364 aa11.32□□□□□ -0.6
CCDC40-209ENST00000573474 CEACAM6P40199 344 aa11.32□□□□□ -0.6
CCDC40-209ENST00000573474 LPCAT3Q6P1A2 487 aa11.32□□□□□ -0.6
CCDC40-209ENST00000573474 RFESDQ8TAC1 157 aa11.32□□□□□ -0.6
CCDC40-209ENST00000573474 NRGNQ92686 78 aa11.32□□□□□ -0.6
CCDC40-209ENST00000573474 GSX2Q9BZM3 304 aa11.32□□□□□ -0.6
CCDC40-209ENST00000573474 TOLLIPQ9H0E2 274 aa11.32□□□□□ -0.6
CCDC40-209ENST00000573474 LINC00574Q9H8X3 128 aa11.32□□□□□ -0.6
CCDC40-209ENST00000573474 C19orf12Q9NSK7 152 aa11.32□□□□□ -0.6
CCDC40-209ENST00000573474 OR1A1Q9P1Q5 309 aa11.32□□□□□ -0.6
CCDC40-209ENST00000573474 CLN8Q9UBY8 286 aa11.32□□□□□ -0.6
CCDC40-209ENST00000573474 OR2W1Q9Y3N9 320 aa11.32□□□□□ -0.6
CCDC40-209ENST00000573474 ALG5Q9Y673 324 aa11.32□□□□□ -0.6
CCDC40-209ENST00000573474 HELZ2Q9BYK8 2649 aaKnown RBP11.31□□□□□ -0.6
CCDC40-209ENST00000573474 A0A0B4J293 547 aa11.31□□□□□ -0.6
CCDC40-209ENST00000573474 MEX3AA1L020 520 aaKnown RBP11.31□□□□□ -0.6
CCDC40-209ENST00000573474 CTSDP07339 412 aaPredicted RBP11.31□□□□□ -0.6
CCDC40-209ENST00000573474 VSIG10L2P0DP72 767 aa11.31□□□□□ -0.6
CCDC40-209ENST00000573474 BCAP31P51572 246 aa11.31□□□□□ -0.6
CCDC40-209ENST00000573474 TAS2R31P59538 309 aa11.31□□□□□ -0.6
CCDC40-209ENST00000573474 FXYD4P59646 89 aa11.31□□□□□ -0.6
CCDC40-209ENST00000573474 C17orf58Q2M2W7 97 aa11.31□□□□□ -0.6
CCDC40-209ENST00000573474 TMEM30BQ3MIR4 351 aa11.31□□□□□ -0.6
CCDC40-209ENST00000573474 METTL11BQ5VVY1 283 aa11.31□□□□□ -0.6
CCDC40-209ENST00000573474 WDR25Q64LD2 544 aaPredicted RBP11.31□□□□□ -0.6
CCDC40-209ENST00000573474 TMEM200BQ69YZ2 307 aa11.31□□□□□ -0.6
CCDC40-209ENST00000573474 GLDNQ6ZMI3 551 aaPredicted RBP11.31□□□□□ -0.6
CCDC40-209ENST00000573474 TCF23Q7RTU1 214 aa11.31□□□□□ -0.6
CCDC40-209ENST00000573474 TMED4Q7Z7H5 227 aa11.31□□□□□ -0.6
CCDC40-209ENST00000573474 SLC25A42Q86VD7 318 aa11.31□□□□□ -0.6
CCDC40-209ENST00000573474 SLC38A6Q8IZM9 456 aa11.31□□□□□ -0.6
CCDC40-209ENST00000573474 CADM3Q8N126 398 aa11.31□□□□□ -0.6
CCDC40-209ENST00000573474 OR52L2PQ8NGH6 319 aa11.31□□□□□ -0.6
CCDC40-209ENST00000573474 NINJ1Q92982 152 aa11.31□□□□□ -0.6
CCDC40-209ENST00000573474 TOMM40LQ969M1 308 aa11.31□□□□□ -0.6
CCDC40-209ENST00000573474 BEX2Q9BXY8 128 aa11.31□□□□□ -0.6
CCDC40-209ENST00000573474 FXYD6Q9H0Q3 95 aa11.31□□□□□ -0.6
CCDC40-209ENST00000573474 GAL3ST2Q9H3Q3 398 aa11.31□□□□□ -0.6
CCDC40-209ENST00000573474 BEX1Q9HBH7 125 aa11.31□□□□□ -0.6
CCDC40-209ENST00000573474 GPN1Q9HCN4 374 aaPredicted RBP11.31□□□□□ -0.6
CCDC40-209ENST00000573474 RDH8Q9NYR8 311 aa11.31□□□□□ -0.6
CCDC40-209ENST00000573474 C14orf166Q9Y224 244 aaKnown RBP11.31□□□□□ -0.6
CCDC40-209ENST00000573474 A0A0A6YYJ9 748 aa11.3□□□□□ -0.6
CCDC40-209ENST00000573474 C7orf66A4D0T2 115 aa11.3□□□□□ -0.6
CCDC40-209ENST00000573474 NDUFS8O00217 210 aa11.3□□□□□ -0.6
CCDC40-209ENST00000573474 LUMP51884 338 aaPredicted RBP11.3□□□□□ -0.6
CCDC40-209ENST00000573474 DSCR9P59020 149 aa11.3□□□□□ -0.6
CCDC40-209ENST00000573474 KRTAP10-9P60411 292 aa11.3□□□□□ -0.6
CCDC40-209ENST00000573474 UBE2MP61081 183 aaKnown RBP11.3□□□□□ -0.6
CCDC40-209ENST00000573474 BAMBIQ13145 260 aa11.3□□□□□ -0.6
CCDC40-209ENST00000573474 C11orf91Q3C1V1 193 aa11.3□□□□□ -0.6
CCDC40-209ENST00000573474 FAHD2BQ6P2I3 314 aaPredicted RBP11.3□□□□□ -0.6
CCDC40-209ENST00000573474 CLEC2AQ6UVW9 174 aa11.3□□□□□ -0.6
CCDC40-209ENST00000573474 FAM185AQ8N0U4 392 aa11.3□□□□□ -0.6
CCDC40-209ENST00000573474 OR10A7Q8NGE5 316 aa11.3□□□□□ -0.6
CCDC40-209ENST00000573474 FAM168AQ92567 244 aa11.3□□□□□ -0.6
CCDC40-209ENST00000573474 DACT3Q96B18 629 aaPredicted RBP11.3□□□□□ -0.6
CCDC40-209ENST00000573474 FAHD2AQ96GK7 314 aa11.3□□□□□ -0.6
CCDC40-209ENST00000573474 RTBDNQ9BSG5 229 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms