RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 GPR61Q9BZJ8 451 aa9.21□□□□□ -0.94
CCDC40-207ENST00000572253 RPRMQ9NS64 109 aa9.21□□□□□ -0.94
CCDC40-207ENST00000572253 CACNG5Q9UF02 275 aa9.21□□□□□ -0.94
CCDC40-207ENST00000572253 ERRFI1Q9UJM3 462 aaPredicted RBP9.21□□□□□ -0.94
CCDC40-207ENST00000572253 ANKRD30BLA7E2S9 258 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 TSTD3H0UI37 97 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 KLF7O75840 302 aaPredicted RBP9.2□□□□□ -0.94
CCDC40-207ENST00000572253 PLP2Q04941 152 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 DNLZQ5SXM8 178 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 COLCA1Q6ZS62 124 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 CPEB3Q8NE35 698 aaKnown RBP9.2□□□□□ -0.94
CCDC40-207ENST00000572253 RDH5Q92781 318 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 ZNF665Q9H7R5 613 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 VAX2Q9UIW0 290 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 A0A0G2JMM0 328 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 A0A1W2PPB8 328 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 A0A1W2PRS3 328 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 SMCO3A2RU48 225 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 KIR3DP1A8MWS1 328 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 TRGC1P0CF51 173 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 IAPPP10997 89 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 PSG2P11465 335 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 OTX2P32243 289 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 SERF2P84101 59 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 TRA2AQ13595 282 aaKnown RBP eCLIP9.2□□□□□ -0.94
CCDC40-207ENST00000572253 HLA-BQ31612 363 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 MRGPRGQ86SM5 289 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 ODF3L1Q8IXM7 274 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 HIST3H2BBQ8N257 126 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 OR5A2Q8NGI9 324 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 IL1F10Q8WWZ1 152 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 TMEM45BQ96B21 275 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 RSG1Q9BU20 258 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 IFITM10A6NMD0 228 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 HS3ST1O14792 307 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 FABP4P15090 132 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 HIST1H1BP16401 226 aaKnown RBP9.2□□□□□ -0.94
CCDC40-207ENST00000572253 C9orf135Q5VTT2 229 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 C5orf24Q7Z6I8 188 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 ZNF573Q86YE8 665 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 OR10V1Q8NGI7 309 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 MBD3L1Q8WWY6 194 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 LSM10Q969L4 123 aaKnown RBP9.2□□□□□ -0.94
CCDC40-207ENST00000572253 MTCH1Q9NZJ7 389 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 WNT16Q9UBV4 365 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 KCNS2Q9ULS6 477 aa9.2□□□□□ -0.94
CCDC40-207ENST00000572253 DEGS1O15121 323 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 GDF9O60383 454 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 ZNF16P17020 682 aaPredicted RBP9.19□□□□□ -0.94
CCDC40-207ENST00000572253 MDH2P40926 338 aaKnown RBP9.19□□□□□ -0.94
CCDC40-207ENST00000572253 DUSP3P51452 185 aaPredicted RBP9.19□□□□□ -0.94
CCDC40-207ENST00000572253 RND2P52198 227 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 FAM90A2PQ658T7 463 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 SP5Q6BEB4 398 aaPredicted RBP9.19□□□□□ -0.94
CCDC40-207ENST00000572253 ADGRG7Q96K78 797 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 FAM186AA6NE01 2351 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 IGKV1-6A0A0C4DH72 117 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 SYNGR4O95473 234 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 METTL15P1P0C7V9 234 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 COX5BP10606 129 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 ZNF600Q6ZNG1 722 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 MRPL30Q8TCC3 161 aaKnown RBP9.19□□□□□ -0.94
CCDC40-207ENST00000572253 UBE2ZQ9H832 354 aaPredicted RBP9.19□□□□□ -0.94
CCDC40-207ENST00000572253 LIN7CQ9NUP9 197 aaKnown RBP9.19□□□□□ -0.94
CCDC40-207ENST00000572253 UFSP2Q9NUQ7 469 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 BOKQ9UMX3 212 aaPredicted RBP9.19□□□□□ -0.94
CCDC40-207ENST00000572253 A0A096LPE4 126 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 A0A1W2PPZ6 126 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 MAP1LC3B2A6NCE7 125 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 CCL4P13236 92 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 DAZAP2Q15038 168 aaPredicted RBP9.19□□□□□ -0.94
CCDC40-207ENST00000572253 ACSF3Q4G176 576 aaPredicted RBP9.19□□□□□ -0.94
CCDC40-207ENST00000572253 TMEM41BQ5BJD5 291 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 FRZBQ92765 325 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 ZNF845Q96IR2 970 aaPredicted RBP9.19□□□□□ -0.94
CCDC40-207ENST00000572253 OR5B12Q96R08 314 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 PRRG4Q9BZD6 226 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 MAP1LC3BQ9GZQ8 125 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 SDF2L1Q9HCN8 221 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 SLC39A9Q9NUM3 307 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 IL36RNQ9UBH0 155 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 PITPNC1Q9UKF7 332 aa9.19□□□□□ -0.94
CCDC40-207ENST00000572253 TRBV6-6A0A0A6YYG2 114 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 CFIP05156 583 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 RFPL3SP0C7P2 107 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 JMJD7P0C870 316 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 FGF8P55075 233 aaPredicted RBP9.18□□□□□ -0.94
CCDC40-207ENST00000572253 C21orf62-AS1Q17RA5 79 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 C4orf17Q53FE4 359 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 ZNF324BQ6AW86 544 aaPredicted RBP9.18□□□□□ -0.94
CCDC40-207ENST00000572253 MOB1BQ7L9L4 216 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 FAM58AQ8N1B3 248 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 LINC00470Q9BZP3 86 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 OR5B21A6NL26 309 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 SYNGR1O43759 233 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 SOD3P08294 240 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 ARR3P36575 388 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 CYB561P49447 251 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 GNG3P63215 75 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 RNPS1Q15287 305 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms