RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 RBP4P02753 201 aa13.33□□□□□ -0.28
CIITA-204ENST00000570546 HNRNPA3P51991 378 aaKnown RBP13.33□□□□□ -0.28
CIITA-204ENST00000570546 LINC00114Q6XXX2 140 aa13.33□□□□□ -0.28
CIITA-204ENST00000570546 WNT2BQ93097 391 aa13.33□□□□□ -0.28
CIITA-204ENST00000570546 TTTY12Q9BZ98 90 aa13.33□□□□□ -0.28
CIITA-204ENST00000570546 IL36GQ9NZH8 169 aa13.33□□□□□ -0.28
CIITA-204ENST00000570546 FBXW9Q5XUX1 488 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 WDR90Q96KV7 1748 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 PTBP3O95758 552 aaKnown RBP13.32□□□□□ -0.28
CIITA-204ENST00000570546 RNASEKQ6P5S7 137 aaKnown RBP13.32□□□□□ -0.28
CIITA-204ENST00000570546 HSD17B10Q99714 261 aaKnown RBP13.32□□□□□ -0.28
CIITA-204ENST00000570546 DOK5Q9P104 306 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 NPIPB9F8W1W9 429 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 H0Y980 276 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 CD8AP01732 235 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 MMP9P14780 707 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 G0S2P27469 103 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 TMEM252Q8N6L7 170 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 IL22RA2Q969J5 263 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 MIOXQ9UGB7 285 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 SLC31A2O15432 143 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 F2RP25116 425 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 PAX5Q02548 391 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 WDR73Q6P4I2 378 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 LDLRAD3Q86YD5 345 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 H1FOOQ8IZA3 346 aaPredicted RBP13.32□□□□□ -0.28
CIITA-204ENST00000570546 MOB3AQ96BX8 217 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 OR1A1Q9P1Q5 309 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 R4GN57 208 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 CHD5Q8TDI0 1954 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 OTOFQ9HC10 1997 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 TGFBR3LH3BV60 316 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 SCTP09683 121 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 TMEM183BQ1AE95 376 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 CYB561D1Q8N8Q1 229 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 OR10G8Q8NGN5 311 aa13.32□□□□□ -0.28
CIITA-204ENST00000570546 CTXND1A0A1B0GTU2 59 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 GATCO43716 136 aaKnown RBP13.31□□□□□ -0.28
CIITA-204ENST00000570546 C1QL1O75973 258 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 SP1P08047 785 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 AESQ08117 197 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 DCAF10Q5QP82 559 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 DEFB124Q8NES8 71 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 TMEM167BQ9NRX6 74 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 TOX4O94842 621 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 GZMHP20718 246 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 FNDC7Q5VTL7 733 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 ZNF880Q6PDB4 577 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 ZNF383Q8NA42 475 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 OR1L4Q8NGR5 311 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 BLNKQ8WV28 456 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 SOSTQ9BQB4 213 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 TLNRD1Q9H1K6 362 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 TECRQ9NZ01 308 aaKnown RBP13.31□□□□□ -0.28
CIITA-204ENST00000570546 PDE6DO43924 150 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 CCKARP32238 428 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 BTCP35070 178 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 TRIP6Q15654 476 aaKnown RBP13.31□□□□□ -0.28
CIITA-204ENST00000570546 RNF151Q2KHN1 245 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 LRRC75AQ8NAA5 344 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 SSMEM1Q8WWF3 244 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 CLN8Q9UBY8 286 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 MOGAT3Q86VF5 341 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 MRPL30Q8TCC3 161 aaKnown RBP13.31□□□□□ -0.28
CIITA-204ENST00000570546 CCL17Q92583 94 aa13.31□□□□□ -0.28
CIITA-204ENST00000570546 BCL2P10415 239 aa13.3□□□□□ -0.28
CIITA-204ENST00000570546 CRIPAKQ8N1N5 446 aa13.3□□□□□ -0.28
CIITA-204ENST00000570546 ONECUT1Q9UBC0 465 aa13.3□□□□□ -0.28
CIITA-204ENST00000570546 HSF4Q9ULV5 492 aa13.3□□□□□ -0.28
CIITA-204ENST00000570546 UBE2V2Q15819 145 aa13.3□□□□□ -0.28
CIITA-204ENST00000570546 TMEM108Q6UXF1 575 aa13.3□□□□□ -0.28
CIITA-204ENST00000570546 OR4P4Q8NGL7 312 aa13.3□□□□□ -0.28
CIITA-204ENST00000570546 Q96M66 194 aa13.3□□□□□ -0.28
CIITA-204ENST00000570546 OR2J1Q9GZK6 312 aa13.3□□□□□ -0.28
CIITA-204ENST00000570546 FUT9Q9Y231 359 aa13.3□□□□□ -0.28
CIITA-204ENST00000570546 GREB1Q4ZG55 1949 aa13.3□□□□□ -0.28
CIITA-204ENST00000570546 KLK10O43240 276 aa13.3□□□□□ -0.28
CIITA-204ENST00000570546 ZNHIT1O43257 154 aa13.3□□□□□ -0.28
CIITA-204ENST00000570546 NSUN5P2Q63ZY6 315 aa13.3□□□□□ -0.28
CIITA-204ENST00000570546 INO80CQ6PI98 192 aaPredicted RBP13.3□□□□□ -0.28
CIITA-204ENST00000570546 OR2T6Q8NHC8 308 aa13.3□□□□□ -0.28
CIITA-204ENST00000570546 BCL2L2Q92843 193 aaPredicted RBP13.3□□□□□ -0.28
CIITA-204ENST00000570546 NPIPB13A6NJU9 1138 aa13.3□□□□□ -0.28
CIITA-204ENST00000570546 NPIPB4C9JG80 1138 aa13.3□□□□□ -0.28
CIITA-204ENST00000570546 PMS2CLQ68D20 193 aa13.3□□□□□ -0.28
CIITA-204ENST00000570546 OR52M1Q8NGK5 317 aa13.3□□□□□ -0.28
CIITA-204ENST00000570546 MYOFQ9NZM1 2061 aa13.3□□□□□ -0.28
CIITA-204ENST00000570546 UBE2L3P68036 154 aaKnown RBP13.29□□□□□ -0.28
CIITA-204ENST00000570546 POC1AQ8NBT0 407 aa13.29□□□□□ -0.28
CIITA-204ENST00000570546 GMPPAQ96IJ6 420 aaPredicted RBP13.29□□□□□ -0.28
CIITA-204ENST00000570546 A0A1W2PN81 502 aa13.29□□□□□ -0.28
CIITA-204ENST00000570546 B4E171 279 aa13.29□□□□□ -0.28
CIITA-204ENST00000570546 TSPAN7P41732 249 aa13.29□□□□□ -0.28
CIITA-204ENST00000570546 PSG5Q15238 335 aa13.29□□□□□ -0.28
CIITA-204ENST00000570546 VAMP3Q15836 100 aa13.29□□□□□ -0.28
CIITA-204ENST00000570546 WDR61Q9GZS3 305 aaKnown RBP13.29□□□□□ -0.28
CIITA-204ENST00000570546 FGF5P12034 268 aa13.29□□□□□ -0.28
CIITA-204ENST00000570546 PPP1CCP36873 323 aaKnown RBP13.29□□□□□ -0.28
CIITA-204ENST00000570546 RNF2Q99496 336 aa13.29□□□□□ -0.28
CIITA-204ENST00000570546 A0A087X0M5 115 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms