RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 WNT2P09544 360 aa13.42□□□□□ -0.26
COMMD4-215ENST00000566843 CTXN2P0C2S0 81 aa13.42□□□□□ -0.26
COMMD4-215ENST00000566843 MDH2P40926 338 aaKnown RBP13.42□□□□□ -0.26
COMMD4-215ENST00000566843 ZNF92Q03936 586 aa13.42□□□□□ -0.26
COMMD4-215ENST00000566843 TMEM267Q0VDI3 215 aaPredicted RBP13.42□□□□□ -0.26
COMMD4-215ENST00000566843 PRAMEF20Q5VT98 475 aa13.42□□□□□ -0.26
COMMD4-215ENST00000566843 C16orf82Q7Z2V1 217 aa13.42□□□□□ -0.26
COMMD4-215ENST00000566843 UBALD2Q8IYN6 164 aa13.42□□□□□ -0.26
COMMD4-215ENST00000566843 ZNF611Q8N823 705 aa13.42□□□□□ -0.26
COMMD4-215ENST00000566843 HIST1H2AAQ96QV6 131 aa13.42□□□□□ -0.26
COMMD4-215ENST00000566843 PARD6GQ9BYG4 376 aaPredicted RBP13.42□□□□□ -0.26
COMMD4-215ENST00000566843 MRPL37Q9BZE1 423 aaKnown RBP13.42□□□□□ -0.26
COMMD4-215ENST00000566843 TMEM38BQ9NVV0 291 aa13.42□□□□□ -0.26
COMMD4-215ENST00000566843 PIGBOS1A0A0B4J2F0 54 aa13.41□□□□□ -0.26
COMMD4-215ENST00000566843 CEBPZOSA8MTT3 80 aa13.41□□□□□ -0.26
COMMD4-215ENST00000566843 ZNF32P17041 273 aa13.41□□□□□ -0.26
COMMD4-215ENST00000566843 HOXA6P31267 233 aa13.41□□□□□ -0.26
COMMD4-215ENST00000566843 FGF8P55075 233 aaPredicted RBP13.41□□□□□ -0.26
COMMD4-215ENST00000566843 RPS18P62269 152 aaKnown RBP13.41□□□□□ -0.26
COMMD4-215ENST00000566843 LRRC75BQ2VPJ9 315 aa13.41□□□□□ -0.26
COMMD4-215ENST00000566843 TCEAL6Q6IPX3 200 aa13.41□□□□□ -0.26
COMMD4-215ENST00000566843 PIGCQ92535 297 aa13.41□□□□□ -0.26
COMMD4-215ENST00000566843 DDA1Q9BW61 102 aa13.41□□□□□ -0.26
COMMD4-215ENST00000566843 DEFB126Q9BYW3 111 aa13.41□□□□□ -0.26
COMMD4-215ENST00000566843 IGKV1-6A0A0C4DH72 117 aa13.41□□□□□ -0.26
COMMD4-215ENST00000566843 XKRY2A2RUG3 117 aa13.41□□□□□ -0.26
COMMD4-215ENST00000566843 TIAF1O95411 115 aa13.41□□□□□ -0.26
COMMD4-215ENST00000566843 PDGFBP01127 241 aaPredicted RBP13.41□□□□□ -0.26
COMMD4-215ENST00000566843 CD55P08174 381 aa13.41□□□□□ -0.26
COMMD4-215ENST00000566843 F2RP25116 425 aa13.41□□□□□ -0.26
COMMD4-215ENST00000566843 TMEM41BQ5BJD5 291 aa13.41□□□□□ -0.26
COMMD4-215ENST00000566843 NCR3LG1Q68D85 454 aa13.41□□□□□ -0.26
COMMD4-215ENST00000566843 OR51G1Q8NGK1 321 aa13.41□□□□□ -0.26
COMMD4-215ENST00000566843 TMEM170AQ8WVE7 144 aa13.41□□□□□ -0.26
COMMD4-215ENST00000566843 PRSS50Q9UI38 385 aa13.41□□□□□ -0.26
COMMD4-215ENST00000566843 GAB2Q9UQC2 676 aa13.41□□□□□ -0.26
COMMD4-215ENST00000566843 EML6Q6ZMW3 1958 aa13.4□□□□□ -0.26
COMMD4-215ENST00000566843 KIR2DS1A0A191URI9 304 aa13.4□□□□□ -0.26
COMMD4-215ENST00000566843 H3BP45 60 aa13.4□□□□□ -0.26
COMMD4-215ENST00000566843 CNOT4O95628 575 aaKnown RBP13.4□□□□□ -0.26
COMMD4-215ENST00000566843 JMJD7P0C870 316 aa13.4□□□□□ -0.26
COMMD4-215ENST00000566843 GZMHP20718 246 aa13.4□□□□□ -0.26
COMMD4-215ENST00000566843 KIR2DS4P43632 304 aa13.4□□□□□ -0.26
COMMD4-215ENST00000566843 KIR2DS1Q14954 304 aa13.4□□□□□ -0.26
COMMD4-215ENST00000566843 SLC10A1Q14973 349 aa13.4□□□□□ -0.26
COMMD4-215ENST00000566843 TMEM241Q24JQ0 296 aa13.4□□□□□ -0.26
COMMD4-215ENST00000566843 C17orf78Q8N4C9 275 aa13.4□□□□□ -0.26
COMMD4-215ENST00000566843 CPT1CQ8TCG5 803 aa13.4□□□□□ -0.26
COMMD4-215ENST00000566843 SF3B5Q9BWJ5 86 aaKnown RBP13.4□□□□□ -0.26
COMMD4-215ENST00000566843 SIT1Q9Y3P8 196 aa13.4□□□□□ -0.26
COMMD4-215ENST00000566843 KIAA1549Q9HCM3 1950 aa13.4□□□□□ -0.26
COMMD4-215ENST00000566843 ZIC3O60481 467 aa13.39□□□□□ -0.27
COMMD4-215ENST00000566843 KBTBD11O94819 623 aa13.39□□□□□ -0.27
COMMD4-215ENST00000566843 APLNRP35414 380 aa13.39□□□□□ -0.27
COMMD4-215ENST00000566843 PSG4Q00888 419 aa13.39□□□□□ -0.27
COMMD4-215ENST00000566843 ARL16Q0P5N6 197 aa13.39□□□□□ -0.27
COMMD4-215ENST00000566843 HAPLN4Q86UW8 402 aa13.39□□□□□ -0.27
COMMD4-215ENST00000566843 SPSB4Q96A44 273 aa13.39□□□□□ -0.27
COMMD4-215ENST00000566843 PINX1Q96BK5 328 aaKnown RBP13.39□□□□□ -0.27
COMMD4-215ENST00000566843 WNT5BQ9H1J7 359 aa13.39□□□□□ -0.27
COMMD4-215ENST00000566843 LAMP3Q9UQV4 416 aa13.39□□□□□ -0.27
COMMD4-215ENST00000566843 ATP23Q9Y6H3 246 aa13.39□□□□□ -0.27
COMMD4-215ENST00000566843 MAP1LC3B2A6NCE7 125 aa13.39□□□□□ -0.27
COMMD4-215ENST00000566843 MYF5P13349 255 aa13.39□□□□□ -0.27
COMMD4-215ENST00000566843 NUBP1P53384 320 aa13.39□□□□□ -0.27
COMMD4-215ENST00000566843 ADIRFQ15847 76 aa13.39□□□□□ -0.27
COMMD4-215ENST00000566843 USF2Q15853 346 aaPredicted RBP13.39□□□□□ -0.27
COMMD4-215ENST00000566843 SPEM1Q8N4L4 309 aa13.39□□□□□ -0.27
COMMD4-215ENST00000566843 SMIM7Q9BQ49 75 aa13.39□□□□□ -0.27
COMMD4-215ENST00000566843 MAP1LC3BQ9GZQ8 125 aa13.39□□□□□ -0.27
COMMD4-215ENST00000566843 RBKSQ9H477 322 aa13.39□□□□□ -0.27
COMMD4-215ENST00000566843 C19orf25Q9UFG5 118 aaPredicted RBP13.39□□□□□ -0.27
COMMD4-215ENST00000566843 A0A0J9YW62 118 aa13.38□□□□□ -0.27
COMMD4-215ENST00000566843 TOX3O15405 576 aaPredicted RBP13.38□□□□□ -0.27
COMMD4-215ENST00000566843 ZNF737O75373 536 aa13.38□□□□□ -0.27
COMMD4-215ENST00000566843 LIFP15018 202 aa13.38□□□□□ -0.27
COMMD4-215ENST00000566843 BCL3P20749 454 aa13.38□□□□□ -0.27
COMMD4-215ENST00000566843 DSCR4P56555 118 aaPredicted RBP13.38□□□□□ -0.27
COMMD4-215ENST00000566843 FAM3BP58499 235 aaPredicted RBP13.38□□□□□ -0.27
COMMD4-215ENST00000566843 RPL23P62829 140 aaKnown RBP13.38□□□□□ -0.27
COMMD4-215ENST00000566843 P2RY6Q15077 328 aa13.38□□□□□ -0.27
COMMD4-215ENST00000566843 BSXQ3C1V8 233 aa13.38□□□□□ -0.27
COMMD4-215ENST00000566843 PCSK4Q6UW60 755 aa13.38□□□□□ -0.27
COMMD4-215ENST00000566843 SAXO1Q8IYX7 474 aa13.38□□□□□ -0.27
COMMD4-215ENST00000566843 LSM10Q969L4 123 aaKnown RBP13.38□□□□□ -0.27
COMMD4-215ENST00000566843 CLDN23Q96B33 292 aa13.38□□□□□ -0.27
COMMD4-215ENST00000566843 ADGRG7Q96K78 797 aa13.38□□□□□ -0.27
COMMD4-215ENST00000566843 SRXN1Q9BYN0 137 aa13.38□□□□□ -0.27
COMMD4-215ENST00000566843 OR2H1Q9GZK4 316 aa13.38□□□□□ -0.27
COMMD4-215ENST00000566843 GALR1P47211 349 aa13.38□□□□□ -0.27
COMMD4-215ENST00000566843 FGF12P61328 243 aa13.38□□□□□ -0.27
COMMD4-215ENST00000566843 RAET1LQ5VY80 246 aa13.38□□□□□ -0.27
COMMD4-215ENST00000566843 Q6ZRM9 215 aa13.38□□□□□ -0.27
COMMD4-215ENST00000566843 REPIN1Q9BWE0 567 aaKnown RBP13.38□□□□□ -0.27
COMMD4-215ENST00000566843 WASF3Q9UPY6 502 aa13.38□□□□□ -0.27
COMMD4-215ENST00000566843 PPP5D1E7EU14 171 aa13.37□□□□□ -0.27
COMMD4-215ENST00000566843 TMEM250H0YL14 139 aa13.37□□□□□ -0.27
COMMD4-215ENST00000566843 EREGO14944 169 aa13.37□□□□□ -0.27
COMMD4-215ENST00000566843 TNFSF12O43508 249 aa13.37□□□□□ -0.27
COMMD4-215ENST00000566843 SYNGR2O43760 224 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms