RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 RBMXL1Q96E39 390 aaKnown RBP7.95□□□□□ -1.14
CLK3-208ENST00000562626 BCL7BQ9BQE9 202 aa7.95□□□□□ -1.14
CLK3-208ENST00000562626 SLIRPQ9GZT3 109 aaKnown RBP7.95□□□□□ -1.14
CLK3-208ENST00000562626 PARP12Q9H0J9 701 aaKnown RBP7.95□□□□□ -1.14
CLK3-208ENST00000562626 ABCG5Q9H222 651 aa7.95□□□□□ -1.14
CLK3-208ENST00000562626 GAL3ST2Q9H3Q3 398 aa7.95□□□□□ -1.14
CLK3-208ENST00000562626 TAF9BQ9HBM6 251 aa7.95□□□□□ -1.14
CLK3-208ENST00000562626 Q9N2K0 584 aa7.95□□□□□ -1.14
CLK3-208ENST00000562626 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.95□□□□□ -1.14
CLK3-208ENST00000562626 TRAPPC2LQ9UL33 140 aa7.95□□□□□ -1.14
CLK3-208ENST00000562626 TRAV18A0A075B6X5 111 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 A0A087X0M5 115 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 TRBV6-6A0A0A6YYG2 114 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 A0A1B0GX30 115 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 A0A1W2PPH5 198 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 METTL21EPA6NDL7 271 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 CCDC160A6NGH7 325 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 F2RL2O00254 374 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 ORC5O43913 435 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 CA11O75493 328 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 VENTXO95231 258 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 FCGR3AP08637 254 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 SCTP09683 121 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 GNG10P50151 68 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 UBE2E1P51965 193 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 HERPUD1Q15011 391 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 NCR3LG1Q68D85 454 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 ZNF626Q68DY1 528 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 LAX1Q8IWV1 398 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 ZNF439Q8NDP4 499 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 OR11H6Q8NGC7 330 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 OR52L2PQ8NGH6 319 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 OR4P4Q8NGL7 312 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 KCTD12Q96CX2 325 aaKnown RBP7.94□□□□□ -1.14
CLK3-208ENST00000562626 DUX5Q96PT3 197 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 CMSS1Q9BQ75 279 aaKnown RBP7.94□□□□□ -1.14
CLK3-208ENST00000562626 DCUN1D5Q9BTE7 237 aa7.94□□□□□ -1.14
CLK3-208ENST00000562626 MS4A7Q9GZW8 240 aaPredicted RBP7.94□□□□□ -1.14
CLK3-208ENST00000562626 RSL24D1Q9UHA3 163 aaKnown RBP7.94□□□□□ -1.14
CLK3-208ENST00000562626 MEIOCA2RUB1 952 aa7.93□□□□□ -1.14
CLK3-208ENST00000562626 MEIS3P1A6NDR6 274 aa7.93□□□□□ -1.14
CLK3-208ENST00000562626 SDCBPO00560 298 aaPredicted RBP7.93□□□□□ -1.14
CLK3-208ENST00000562626 IGLV1-47P01700 117 aa7.93□□□□□ -1.14
CLK3-208ENST00000562626 ARG1P05089 322 aa7.93□□□□□ -1.14
CLK3-208ENST00000562626 FCER2P06734 321 aa7.93□□□□□ -1.14
CLK3-208ENST00000562626 CD3GP09693 182 aa7.93□□□□□ -1.14
CLK3-208ENST00000562626 FPR2P25090 351 aa7.93□□□□□ -1.14
CLK3-208ENST00000562626 CD34P28906 385 aa7.93□□□□□ -1.14
CLK3-208ENST00000562626 ZNF134P52741 427 aa7.93□□□□□ -1.14
CLK3-208ENST00000562626 HLA-DRB3P79483 266 aa7.93□□□□□ -1.14
CLK3-208ENST00000562626 DIAPH2-AS1Q14236 149 aa7.93□□□□□ -1.14
CLK3-208ENST00000562626 HACD4Q5VWC8 232 aa7.93□□□□□ -1.14
CLK3-208ENST00000562626 ABHD12Q8N2K0 398 aa7.93□□□□□ -1.14
CLK3-208ENST00000562626 ZDHHC22Q8N966 263 aa7.93□□□□□ -1.14
CLK3-208ENST00000562626 ZNF565Q8N9K5 539 aa7.93□□□□□ -1.14
CLK3-208ENST00000562626 OR10V1Q8NGI7 309 aa7.93□□□□□ -1.14
CLK3-208ENST00000562626 TAF15Q92804 592 aaKnown RBP eCLIP7.93□□□□□ -1.14
CLK3-208ENST00000562626 CLEC7AQ9BXN2 247 aa7.93□□□□□ -1.14
CLK3-208ENST00000562626 NXF2Q9GZY0 626 aaKnown RBP7.93□□□□□ -1.14
CLK3-208ENST00000562626 AUNIPQ9H7T9 357 aa7.93□□□□□ -1.14
CLK3-208ENST00000562626 CHMP1AQ9HD42 196 aaPredicted RBP7.93□□□□□ -1.14
CLK3-208ENST00000562626 C12orf4Q9NQ89 552 aa7.93□□□□□ -1.14
CLK3-208ENST00000562626 GFOD1Q9NXC2 390 aa7.93□□□□□ -1.14
CLK3-208ENST00000562626 CCDC59Q9P031 241 aaKnown RBP7.93□□□□□ -1.14
CLK3-208ENST00000562626 OR1A1Q9P1Q5 309 aa7.93□□□□□ -1.14
CLK3-208ENST00000562626 PSG11Q9UQ72 335 aa7.93□□□□□ -1.14
CLK3-208ENST00000562626 LY6LH3BQJ8 138 aa7.92□□□□□ -1.14
CLK3-208ENST00000562626 PLXNB1O43157 2135 aa7.92□□□□□ -1.14
CLK3-208ENST00000562626 XRCC3O43542 346 aa7.92□□□□□ -1.14
CLK3-208ENST00000562626 TMEM127O75204 238 aa7.92□□□□□ -1.14
CLK3-208ENST00000562626 HLA-DQB1P01920 261 aa7.92□□□□□ -1.14
CLK3-208ENST00000562626 APOA1P02647 267 aa7.92□□□□□ -1.14
CLK3-208ENST00000562626 MELTFP08582 738 aa7.92□□□□□ -1.14
CLK3-208ENST00000562626 GSTP1P09211 210 aaKnown RBP7.92□□□□□ -1.14
CLK3-208ENST00000562626 GSTT2P0CG29 244 aa7.92□□□□□ -1.14
CLK3-208ENST00000562626 GSTT2BP0CG30 244 aa7.92□□□□□ -1.14
CLK3-208ENST00000562626 GZMHP20718 246 aa7.92□□□□□ -1.14
CLK3-208ENST00000562626 PPP1CCP36873 323 aaKnown RBP7.92□□□□□ -1.14
CLK3-208ENST00000562626 TAS2R20P59543 309 aa7.92□□□□□ -1.14
CLK3-208ENST00000562626 DYNC1I2Q13409 638 aaKnown RBP7.92□□□□□ -1.14
CLK3-208ENST00000562626 ARFRP1Q13795 201 aa7.92□□□□□ -1.14
CLK3-208ENST00000562626 PLA1AQ53H76 456 aa7.92□□□□□ -1.14
CLK3-208ENST00000562626 IGSF11Q5DX21 431 aa7.92□□□□□ -1.14
CLK3-208ENST00000562626 C6orf183Q5T699 404 aa7.92□□□□□ -1.14
CLK3-208ENST00000562626 LDLRAD3Q86YD5 345 aa7.92□□□□□ -1.14
CLK3-208ENST00000562626 GVQW1Q8N7I0 195 aa7.92□□□□□ -1.14
CLK3-208ENST00000562626 OR13D1Q8NGV5 346 aa7.92□□□□□ -1.14
CLK3-208ENST00000562626 PRDM13Q9H4Q3 707 aa7.92□□□□□ -1.14
CLK3-208ENST00000562626 OCEL1Q9H607 264 aa7.92□□□□□ -1.14
CLK3-208ENST00000562626 HEXA-AS1Q9H8Q6 139 aa7.92□□□□□ -1.14
CLK3-208ENST00000562626 ATRQ13535 2644 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 hCG_1809904A0A1W2PP81 198 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 A0A1W2PPE2 198 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 A0A1W2PR64 198 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 A0A1W2PRV1 198 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 DNAJC9-AS1A6NH13 148 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 A6NHS1 94 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 SERPINE3A8MV23 424 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 H3BUI4 141 aa7.91□□□□□ -1.14
CLK3-208ENST00000562626 J3QR06 171 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms