RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 PTTG1O95997 202 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 MT-ND4P03905 459 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 FCGR3AP08637 254 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 RPS2P15880 293 aaKnown RBP9.75□□□□□ -0.85
LDLR-212ENST00000560467 ERP29P30040 261 aaKnown RBP9.75□□□□□ -0.85
LDLR-212ENST00000560467 NPY4RP50391 375 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 AESQ08117 197 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 ZMYND11Q15326 602 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 PRR31Q5SQ13 230 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 OLFML2AQ68BL7 652 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 ZNF497Q6ZNH5 498 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 ZNF554Q86TJ5 538 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 ZDHHC22Q8N966 263 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 ZNRF1Q8ND25 227 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 OR4S1Q8NGB4 309 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 OR5AP2Q8NGF4 316 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 C22orf15Q8WYQ4 148 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 RAB39BQ96DA2 213 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 SCGB3A2Q96PL1 93 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 JMJD8Q96S16 334 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 SDHCQ99643 169 aaPredicted RBP9.75□□□□□ -0.85
LDLR-212ENST00000560467 PRRT1Q99946 306 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 TMEM246Q9BRR3 403 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 SUCNR1Q9BXA5 334 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 NCOR1P1Q9H4R4 102 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 KAAG1Q9UBP8 84 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 ANXA10Q9UJ72 324 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 TRBV6-6A0A0A6YYG2 114 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 hCG_1809904A0A1W2PP81 198 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 A0A1W2PPE2 198 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 A0A1W2PR64 198 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 A0A1W2PRV1 198 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 TMEM82A0PJX8 343 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 HSPA12AO43301 675 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 SSX5O60225 188 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 PSPNO60542 156 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 DIRAS3O95661 229 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 NAPSAO96009 420 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 CD3DP04234 171 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 AMY2AP04746 511 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 FCER2P06734 321 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 OR3A1P47881 315 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 P2RX3P56373 397 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 SEC61A1P61619 476 aaKnown RBP9.74□□□□□ -0.85
LDLR-212ENST00000560467 UBA52P62987 128 aaKnown RBP9.74□□□□□ -0.85
LDLR-212ENST00000560467 PAX5Q02548 391 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 MEF2CQ06413 473 aaPredicted RBP9.74□□□□□ -0.85
LDLR-212ENST00000560467 CD276Q5ZPR3 534 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 PLET1Q6UQ28 207 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 OR6F1Q8NGZ6 308 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 CCDC107Q8WV48 283 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 H1FXQ92522 213 aaKnown RBP9.74□□□□□ -0.85
LDLR-212ENST00000560467 TRIM63Q969Q1 353 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 NEIL1Q96FI4 390 aaPredicted RBP9.74□□□□□ -0.85
LDLR-212ENST00000560467 GAFA1Q96PS6 74 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 GINS4Q9BRT9 223 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 DPAGT1Q9H3H5 408 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 Q9N2K0 584 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 OPN4Q9UHM6 478 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 ZNF230Q9UIE0 474 aaPredicted RBP9.74□□□□□ -0.85
LDLR-212ENST00000560467 ZNF222Q9UK12 451 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 ELF5Q9UKW6 265 aaPredicted RBP9.74□□□□□ -0.85
LDLR-212ENST00000560467 TGP01266 2768 aa9.74□□□□□ -0.85
LDLR-212ENST00000560467 ODAMA1E959 279 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 FABP7O15540 132 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 LANCL1O43813 399 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 ZNF737O75373 536 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 IGHV2-70P01814 119 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 IGHV2-5P01817 119 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 PMP2P02689 132 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 NAT1P18440 290 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 HRH1P35367 487 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 ECI1P42126 302 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 KLF9Q13886 244 aaPredicted RBP9.73□□□□□ -0.85
LDLR-212ENST00000560467 CDK10Q15131 360 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 C11orf91Q3C1V1 193 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 C17orf107Q6ZR85 190 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 Q6ZS49 121 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 ARRDC1Q8N5I2 433 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 TEX29Q8N6K0 151 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 GVQW1Q8N7I0 195 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 FAM216BQ8N7L0 139 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 OR4A4PQ8NGN8 299 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 OR10J5Q8NHC4 309 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 DYRK2Q92630 601 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 GALMQ96C23 342 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 GAL3ST2Q9H3Q3 398 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 HRASLSQ9HDD0 168 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 DCAF16Q9NXF7 216 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 EHFQ9NZC4 300 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 ZNF581Q9P0T4 197 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 CLN8Q9UBY8 286 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 KIF25Q9UIL4 384 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 MAB21L2Q9Y586 359 aa9.73□□□□□ -0.85
LDLR-212ENST00000560467 TRBV23-1A0A0A0MS06 115 aa9.72□□□□□ -0.85
LDLR-212ENST00000560467 CEACAM18A8MTB9 384 aa9.72□□□□□ -0.85
LDLR-212ENST00000560467 J3QLI3 93 aa9.72□□□□□ -0.85
LDLR-212ENST00000560467 DVL1O14640 695 aa9.72□□□□□ -0.85
LDLR-212ENST00000560467 FSHBP01225 129 aa9.72□□□□□ -0.85
LDLR-212ENST00000560467 OR5H8P0DN80 308 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms