RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 AUNIPQ9H7T9 357 aa10.17□□□□□ -0.78
GABPB1-208ENST00000558970 TAS2R3Q9NYW6 316 aa10.17□□□□□ -0.78
GABPB1-208ENST00000558970 IDI2-AS1Q9NZ38 188 aa10.17□□□□□ -0.78
GABPB1-208ENST00000558970 ADAM30Q9UKF2 790 aa10.17□□□□□ -0.78
GABPB1-208ENST00000558970 SOX21Q9Y651 276 aaPredicted RBP10.17□□□□□ -0.78
GABPB1-208ENST00000558970 FN1P02751 2386 aaKnown RBP10.17□□□□□ -0.78
GABPB1-208ENST00000558970 COL6A5A8TX70 2615 aa10.17□□□□□ -0.78
GABPB1-208ENST00000558970 ATRQ13535 2644 aa10.17□□□□□ -0.78
GABPB1-208ENST00000558970 TLN2Q9Y4G6 2542 aa10.16□□□□□ -0.78
GABPB1-208ENST00000558970 A0A0A6YYH2 397 aa10.16□□□□□ -0.78
GABPB1-208ENST00000558970 CENPVL3A0A0U1RRI6 287 aa10.16□□□□□ -0.78
GABPB1-208ENST00000558970 A6NJ64 397 aa10.16□□□□□ -0.78
GABPB1-208ENST00000558970 C15orf65H3BRN8 121 aa10.16□□□□□ -0.78
GABPB1-208ENST00000558970 SDCBPO00560 298 aaPredicted RBP10.16□□□□□ -0.78
GABPB1-208ENST00000558970 SPINT2O43291 252 aa10.16□□□□□ -0.78
GABPB1-208ENST00000558970 SSX5O60225 188 aa10.16□□□□□ -0.78
GABPB1-208ENST00000558970 HLA-DRB3P79483 266 aa10.16□□□□□ -0.78
GABPB1-208ENST00000558970 IL18Q14116 193 aa10.16□□□□□ -0.78
GABPB1-208ENST00000558970 GNMTQ14749 295 aa10.16□□□□□ -0.78
GABPB1-208ENST00000558970 CNPY1Q3B7I2 92 aa10.16□□□□□ -0.78
GABPB1-208ENST00000558970 HEPN1Q6WQI6 88 aa10.16□□□□□ -0.78
GABPB1-208ENST00000558970 GAPTQ8N292 157 aa10.16□□□□□ -0.78
GABPB1-208ENST00000558970 GVQW1Q8N7I0 195 aa10.16□□□□□ -0.78
GABPB1-208ENST00000558970 KIRREL1Q96J84 757 aa10.16□□□□□ -0.78
GABPB1-208ENST00000558970 CMTM3Q96MX0 182 aa10.16□□□□□ -0.78
GABPB1-208ENST00000558970 NXF2Q9GZY0 626 aaKnown RBP10.16□□□□□ -0.78
GABPB1-208ENST00000558970 ZNF286AQ9HBT8 521 aa10.16□□□□□ -0.78
GABPB1-208ENST00000558970 Q9N2K0 584 aa10.16□□□□□ -0.78
GABPB1-208ENST00000558970 BATF3Q9NR55 127 aa10.16□□□□□ -0.78
GABPB1-208ENST00000558970 ZNRD1Q9P1U0 126 aa10.16□□□□□ -0.78
GABPB1-208ENST00000558970 SESN1Q9Y6P5 492 aa10.16□□□□□ -0.78
GABPB1-208ENST00000558970 IGKV1D-8A0A087WSZ0 117 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 ARG1P05089 322 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 SCTP09683 121 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 CGB3P0DN86 165 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 CGB7P0DN87 165 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 GZMHP20718 246 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 PRTN3P24158 256 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 PAX6P26367 422 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 TNFSF8P32971 234 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 S100A5P33763 92 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 ARL6IP1Q15041 203 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 HMGN3Q15651 99 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 PNLIPRP3Q17RR3 467 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 CHRFAM7AQ494W8 412 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 HCP5Q6MZN7 132 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 TRAT1Q6PIZ9 186 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 MOB1BQ7L9L4 216 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 OR52L2PQ8NGH6 319 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 TNFRSF14Q92956 283 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 MS4A7Q9GZW8 240 aaPredicted RBP10.15□□□□□ -0.78
GABPB1-208ENST00000558970 TMEM133Q9H2Q1 129 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 MMP27Q9H306 513 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 RIMS4Q9H426 269 aaPredicted RBP10.15□□□□□ -0.78
GABPB1-208ENST00000558970 NCOR1P1Q9H4R4 102 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 IFT46Q9NQC8 304 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.15□□□□□ -0.78
GABPB1-208ENST00000558970 MBNL3Q9NUK0 354 aaKnown RBP10.15□□□□□ -0.78
GABPB1-208ENST00000558970 GNG12Q9UBI6 72 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 ZNF69Q9UC07 566 aa10.15□□□□□ -0.78
GABPB1-208ENST00000558970 IGHV2-26A0A0B4J1V2 119 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 IGHV1-69DA0A0B4J2H0 117 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 MDFIC2A0A1B0GVS7 189 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 BET1O15155 118 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 ORC5O43913 435 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 IGHV1-69P01742 117 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 HLA-DQB1P01920 261 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 GSTT2P0CG29 244 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 GSTT2BP0CG30 244 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 SRD5A1P18405 259 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 FPR2P25090 351 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 PRSS3P35030 304 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 PPP1CCP36873 323 aaKnown RBP10.14□□□□□ -0.79
GABPB1-208ENST00000558970 NCR3LG1Q68D85 454 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 OR52W1Q6IF63 320 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 ZNF880Q6PDB4 577 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 FAM131AQ6UXB0 335 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 BCL6BQ8N143 479 aaPredicted RBP10.14□□□□□ -0.79
GABPB1-208ENST00000558970 ABHD12Q8N2K0 398 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 OR13D1Q8NGV5 346 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 CLEC7AQ9BXN2 247 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 HEXA-AS1Q9H8Q6 139 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 OR2S2Q9NQN1 319 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 OR1A1Q9P1Q5 309 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 SLC23A1Q9UHI7 598 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 CDC42EP3Q9UKI2 254 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 NUP50Q9UKX7 468 aa10.14□□□□□ -0.79
GABPB1-208ENST00000558970 TRDCB7Z8K6 153 aa10.13□□□□□ -0.79
GABPB1-208ENST00000558970 NPIPB11E5RHQ5 1161 aa10.13□□□□□ -0.79
GABPB1-208ENST00000558970 NPFFO15130 113 aa10.13□□□□□ -0.79
GABPB1-208ENST00000558970 HSPA12AO43301 675 aa10.13□□□□□ -0.79
GABPB1-208ENST00000558970 RBP4P02753 201 aa10.13□□□□□ -0.79
GABPB1-208ENST00000558970 EPHA1P21709 976 aa10.13□□□□□ -0.79
GABPB1-208ENST00000558970 LGALS4P56470 323 aa10.13□□□□□ -0.79
GABPB1-208ENST00000558970 PITPNAQ00169 270 aa10.13□□□□□ -0.79
GABPB1-208ENST00000558970 PLA1AQ53H76 456 aa10.13□□□□□ -0.79
GABPB1-208ENST00000558970 IGSF11Q5DX21 431 aa10.13□□□□□ -0.79
GABPB1-208ENST00000558970 C1orf122Q6ZSJ8 110 aa10.13□□□□□ -0.79
GABPB1-208ENST00000558970 C17orf50Q8WW18 174 aa10.13□□□□□ -0.79
GABPB1-208ENST00000558970 GALMQ96C23 342 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms