RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 LPAR5Q9H1C0 372 aa2.73□□□□□ -1.97
HERC1-203ENST00000558532 RBKSQ9H477 322 aa2.73□□□□□ -1.97
HERC1-203ENST00000558532 ZDHHC6Q9H6R6 413 aa2.73□□□□□ -1.97
HERC1-203ENST00000558532 UBTD1Q9HAC8 227 aa2.73□□□□□ -1.97
HERC1-203ENST00000558532 SDF2L1Q9HCN8 221 aa2.73□□□□□ -1.97
HERC1-203ENST00000558532 Q9N2K0 584 aa2.73□□□□□ -1.97
HERC1-203ENST00000558532 DNAJC4Q9NNZ3 241 aa2.73□□□□□ -1.97
HERC1-203ENST00000558532 MMP25Q9NPA2 562 aa2.73□□□□□ -1.97
HERC1-203ENST00000558532 MRPL22Q9NWU5 206 aaKnown RBP2.73□□□□□ -1.97
HERC1-203ENST00000558532 LSM7Q9UK45 103 aaKnown RBP2.73□□□□□ -1.97
HERC1-203ENST00000558532 CLEC4EQ9ULY5 219 aa2.73□□□□□ -1.97
HERC1-203ENST00000558532 HHLA2Q9UM44 414 aa2.73□□□□□ -1.97
HERC1-203ENST00000558532 RCL1Q9Y2P8 373 aaKnown RBP2.73□□□□□ -1.97
HERC1-203ENST00000558532 LIPGQ9Y5X9 500 aa2.73□□□□□ -1.97
HERC1-203ENST00000558532 ZNF780BQ9Y6R6 833 aa2.73□□□□□ -1.97
HERC1-203ENST00000558532 R4GMQ9 66 aa2.73□□□□□ -1.97
HERC1-203ENST00000558532 LOC105371242A0A075B767 164 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 IGHV4OR15-8A0A075B7B6 117 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 NSG1A0A0A6YYJ2 146 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 TRBV11-1A0A0K0K1C0 115 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 DUXBA0A1W2PPF3 345 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 FAM230AA0A1W2PPH8 454 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 XKRY2A2RUG3 117 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 OR6C6A6NF89 314 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 A6NIZ1 184 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 GLOD5A6NK44 160 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 F6UZH7 168 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 TMEM250H0YL14 139 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 J3KRW8 73 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 BMPR1BO00238 502 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 XKRYO14609 159 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 SOX15O60248 233 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 CIDEAO60543 219 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 DUSP11O75319 330 aaKnown RBP2.72□□□□□ -1.97
HERC1-203ENST00000558532 CDS2O95674 445 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 RENP00797 406 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 HRASP01112 189 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 BGLAPP02818 100 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 CSN2P05814 226 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 ASGR1P07306 291 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 SLC35G4P0C7Q5 338 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 PGA3P0DJD8 388 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 C8orf89P0DMQ9 161 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 BCL2P10415 239 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 PNMTP11086 282 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 SELEP16581 610 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 TMEM11P17152 192 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 SERPINA2P20848 420 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 CCL1P22362 96 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 ATP6V0CP27449 155 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 PBLDP30039 288 aaPredicted RBP2.72□□□□□ -1.97
HERC1-203ENST00000558532 PEBP1P30086 187 aaKnown RBP2.72□□□□□ -1.97
HERC1-203ENST00000558532 GRPRP30550 384 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 SRP14P37108 136 aaKnown RBP2.72□□□□□ -1.97
HERC1-203ENST00000558532 RBMXP38159 391 aaKnown RBP2.72□□□□□ -1.97
HERC1-203ENST00000558532 SLC11A1P49279 550 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 POLR2HP52434 150 aaKnown RBP2.72□□□□□ -1.97
HERC1-203ENST00000558532 TMEM50BP56557 158 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 CLDN6P56747 220 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 S100A10P60903 97 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 HIST1H3AP68431 136 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 CCL20P78556 96 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 CDK3Q00526 305 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 BEX3Q00994 111 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 EWSR1Q01844 656 aaKnown RBP eCLIP2.72□□□□□ -1.97
HERC1-203ENST00000558532 POU3F1Q03052 451 aaPredicted RBP2.72□□□□□ -1.97
HERC1-203ENST00000558532 ZNF92Q03936 586 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 BAXQ07812 192 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 HYAL1Q12794 435 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 IL24Q13007 206 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 SGCGQ13326 291 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 TSTA3Q13630 321 aaPredicted RBP2.72□□□□□ -1.97
HERC1-203ENST00000558532 TMEM187Q14656 261 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 MEP1BQ16820 701 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 ODF4Q2M2E3 257 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 TMEM52BQ4KMG9 183 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 FAM78AQ5JUQ0 283 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 COL5A1-AS1Q5SY13 56 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 TPTE2P1Q5T6R2 138 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 WDR25Q64LD2 544 aaPredicted RBP2.72□□□□□ -1.97
HERC1-203ENST00000558532 LEMD1Q68G75 181 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 RTL6Q6ICC9 239 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 KCTD18Q6PI47 426 aaPredicted RBP2.72□□□□□ -1.97
HERC1-203ENST00000558532 MEX3BQ6ZN04 569 aaKnown RBP2.72□□□□□ -1.97
HERC1-203ENST00000558532 C1orf122Q6ZSJ8 110 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 Q6ZSR3 168 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 ERN2Q76MJ5 926 aaKnown RBP2.72□□□□□ -1.97
HERC1-203ENST00000558532 TCF24Q7RTU0 167 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 TMEM144Q7Z5S9 345 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 LINC01551Q86U37 167 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 ZNF329Q86UD4 541 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 HEATR5AQ86XA9 2040 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 C20orf196Q8IYI0 205 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 CSNK1A1LQ8N752 337 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 NAXEQ8NCW5 288 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 OR2M7Q8NG81 312 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 OR2L3Q8NG85 312 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 OR51G1Q8NGK1 321 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 OR5H2Q8NGV7 314 aa2.72□□□□□ -1.97
HERC1-203ENST00000558532 OR52N5Q8NH56 324 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms