RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 AQP4P55087 323 aa9.47□□□□□ -0.89
HERC1-202ENST00000558324 CD83Q01151 205 aa9.47□□□□□ -0.89
HERC1-202ENST00000558324 GPR50Q13585 617 aa9.47□□□□□ -0.89
HERC1-202ENST00000558324 NKAPLQ5M9Q1 402 aa9.47□□□□□ -0.89
HERC1-202ENST00000558324 SLC16A12Q6ZSM3 486 aa9.47□□□□□ -0.89
HERC1-202ENST00000558324 THNSL2Q86YJ6 484 aa9.47□□□□□ -0.89
HERC1-202ENST00000558324 C5orf56Q8N8D9 126 aa9.47□□□□□ -0.89
HERC1-202ENST00000558324 MRPS24Q96EL2 167 aaKnown RBP9.47□□□□□ -0.89
HERC1-202ENST00000558324 DCLRE1BQ9H816 532 aa9.47□□□□□ -0.89
HERC1-202ENST00000558324 GFOD1Q9NXC2 390 aa9.47□□□□□ -0.89
HERC1-202ENST00000558324 GNG12Q9UBI6 72 aa9.47□□□□□ -0.89
HERC1-202ENST00000558324 IGHV1-3A0A0C4DH29 117 aa9.46□□□□□ -0.9
HERC1-202ENST00000558324 PSMB11A5LHX3 300 aa9.46□□□□□ -0.9
HERC1-202ENST00000558324 SPINT2O43291 252 aa9.46□□□□□ -0.9
HERC1-202ENST00000558324 MPIG6BO95866 241 aa9.46□□□□□ -0.9
HERC1-202ENST00000558324 PF4P02776 101 aa9.46□□□□□ -0.9
HERC1-202ENST00000558324 GAPDHP04406 335 aaKnown RBP9.46□□□□□ -0.9
HERC1-202ENST00000558324 CD1AP06126 327 aa9.46□□□□□ -0.9
HERC1-202ENST00000558324 RCC1P18754 421 aaPredicted RBP9.46□□□□□ -0.9
HERC1-202ENST00000558324 CD33P20138 364 aa9.46□□□□□ -0.9
HERC1-202ENST00000558324 LOXL3P58215 753 aa9.46□□□□□ -0.9
HERC1-202ENST00000558324 MED22Q15528 200 aa9.46□□□□□ -0.9
HERC1-202ENST00000558324 ACSM3Q53FZ2 586 aa9.46□□□□□ -0.9
HERC1-202ENST00000558324 RBM48Q5RL73 367 aaKnown RBP9.46□□□□□ -0.9
HERC1-202ENST00000558324 C6orf141Q5SZD1 244 aa9.46□□□□□ -0.9
HERC1-202ENST00000558324 OR10K2Q6IF99 312 aa9.46□□□□□ -0.9
HERC1-202ENST00000558324 ZNF329Q86UD4 541 aa9.46□□□□□ -0.9
HERC1-202ENST00000558324 LYPD6Q86Y78 171 aa9.46□□□□□ -0.9
HERC1-202ENST00000558324 CDH26Q8IXH8 852 aa9.46□□□□□ -0.9
HERC1-202ENST00000558324 OR1L1Q8NH94 360 aa9.46□□□□□ -0.9
HERC1-202ENST00000558324 NRG4Q8WWG1 115 aa9.46□□□□□ -0.9
HERC1-202ENST00000558324 THRSPQ92748 146 aa9.46□□□□□ -0.9
HERC1-202ENST00000558324 RBMXL1Q96E39 390 aaKnown RBP9.46□□□□□ -0.9
HERC1-202ENST00000558324 Q96M66 194 aa9.46□□□□□ -0.9
HERC1-202ENST00000558324 NOL4LQ96MY1 436 aaPredicted RBP9.46□□□□□ -0.9
HERC1-202ENST00000558324 KCNK15Q9H427 330 aa9.46□□□□□ -0.9
HERC1-202ENST00000558324 SCN3BQ9NY72 215 aa9.46□□□□□ -0.9
HERC1-202ENST00000558324 LINC00527Q9UJ94 153 aa9.46□□□□□ -0.9
HERC1-202ENST00000558324 TSSC4Q9Y5U2 329 aaPredicted RBP9.46□□□□□ -0.9
HERC1-202ENST00000558324 NCBP2LA6PVI3 153 aaKnown RBP9.45□□□□□ -0.9
HERC1-202ENST00000558324 SERPINE3A8MV23 424 aa9.45□□□□□ -0.9
HERC1-202ENST00000558324 HBZP02008 142 aa9.45□□□□□ -0.9
HERC1-202ENST00000558324 IL3RAP26951 378 aa9.45□□□□□ -0.9
HERC1-202ENST00000558324 ZNF816Q0VGE8 651 aaPredicted RBP9.45□□□□□ -0.9
HERC1-202ENST00000558324 SPHARQ15513 63 aa9.45□□□□□ -0.9
HERC1-202ENST00000558324 C6orf183Q5T699 404 aa9.45□□□□□ -0.9
HERC1-202ENST00000558324 KPRPQ5T749 579 aaPredicted RBP9.45□□□□□ -0.9
HERC1-202ENST00000558324 SIGIRRQ6IA17 410 aa9.45□□□□□ -0.9
HERC1-202ENST00000558324 C5orf24Q7Z6I8 188 aa9.45□□□□□ -0.9
HERC1-202ENST00000558324 OR52M1Q8NGK5 317 aa9.45□□□□□ -0.9
HERC1-202ENST00000558324 RTN4IP1Q8WWV3 396 aaPredicted RBP9.45□□□□□ -0.9
HERC1-202ENST00000558324 EAF1Q96JC9 268 aaPredicted RBP9.45□□□□□ -0.9
HERC1-202ENST00000558324 UQCC2Q9BRT2 126 aa9.45□□□□□ -0.9
HERC1-202ENST00000558324 CST11Q9H112 138 aa9.45□□□□□ -0.9
HERC1-202ENST00000558324 LSM2Q9Y333 95 aaKnown RBP9.45□□□□□ -0.9
HERC1-202ENST00000558324 FAM90A10PA6NDY2 464 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 FAM90A7PA6NKC0 464 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 FAM90A23PA8MXZ1 464 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 ZNF736B4DX44 427 aaPredicted RBP9.44□□□□□ -0.9
HERC1-202ENST00000558324 H0YHG0 523 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 FGF16O43320 207 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 PDCD6O75340 191 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 HSMCR30P0CW71 290 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 IGLL1P15814 213 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 FUT3P21217 361 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 GP2P55259 537 aaKnown RBP9.44□□□□□ -0.9
HERC1-202ENST00000558324 GNMTQ14749 295 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 HSD17B12Q53GQ0 312 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 LIPKQ5VXJ0 399 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 CEACAM19Q7Z692 300 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 SLC35E3Q7Z769 313 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 LRRTM1Q86UE6 522 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 MS4A15Q8N5U1 240 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 LINC00311Q8N616 119 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 ZNF439Q8NDP4 499 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 TMEM203Q969S6 136 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 PHF21AQ96BD5 680 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 TAF9BQ9HBM6 251 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 RAB9BQ9NP90 201 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 OR2S2Q9NQN1 319 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 KCNIP1Q9NZI2 227 aa9.44□□□□□ -0.9
HERC1-202ENST00000558324 SC5DO75845 299 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 VSIG8P0DPA2 414 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 ZNF134P52741 427 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 SLC35A2P78381 396 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 CT45A1Q5HYN5 189 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 RNLSQ5VYX0 342 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 GLT8D1Q68CQ7 371 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 TRAT1Q6PIZ9 186 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 UNQ9370/PRO34162Q6UXP9 181 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 SLC25A48Q6ZT89 311 aaKnown RBP9.43□□□□□ -0.9
HERC1-202ENST00000558324 TGIF2LXQ8IUE1 241 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 IZUMO1Q8IYV9 350 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 GAPTQ8N292 157 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 C8orf31Q8N9H6 132 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 OR52L2PQ8NGH6 319 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 OR2T10Q8NGZ9 312 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 CT45A3Q8NHU0 189 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 MRPL30Q8TCC3 161 aaKnown RBP9.43□□□□□ -0.9
HERC1-202ENST00000558324 CHPT1Q8WUD6 406 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms