RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 H3BQ15 152 aa10.95□□□□□ -0.66
LDLR-207ENST00000558013 PMELP40967 661 aa10.95□□□□□ -0.66
LDLR-207ENST00000558013 CEBPDP49716 269 aaPredicted RBP10.95□□□□□ -0.66
LDLR-207ENST00000558013 SRPXP78539 464 aa10.95□□□□□ -0.66
LDLR-207ENST00000558013 ARL16Q0P5N6 197 aa10.95□□□□□ -0.66
LDLR-207ENST00000558013 Q6ZS49 121 aa10.95□□□□□ -0.66
LDLR-207ENST00000558013 FAM58AQ8N1B3 248 aa10.95□□□□□ -0.66
LDLR-207ENST00000558013 OR5A2Q8NGI9 324 aa10.95□□□□□ -0.66
LDLR-207ENST00000558013 OR1J1Q8NGS3 322 aa10.95□□□□□ -0.66
LDLR-207ENST00000558013 TAAR9Q96RI9 348 aa10.95□□□□□ -0.66
LDLR-207ENST00000558013 OR2W1Q9Y3N9 320 aa10.95□□□□□ -0.66
LDLR-207ENST00000558013 DOCK11Q5JSL3 2073 aa10.95□□□□□ -0.66
LDLR-207ENST00000558013 KIR2DS1A0A191URI9 304 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 KIR2DS4P43632 304 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 KIR2DS1Q14954 304 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 RNFT1Q5M7Z0 435 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 NCMAPQ5T1S8 102 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 FAM180AQ6UWF9 173 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 BCL2L14Q9BZR8 327 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 COL27A1Q8IZC6 1860 aaPredicted RBP10.94□□□□□ -0.66
LDLR-207ENST00000558013 TMEM265A0A087WTH1 108 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 LNP1A1A4G5 178 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 FAM90A10PA6NDY2 464 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 FAM90A18PA6NE21 464 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 FAM90A16PA6NEW6 464 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 FAM90A20PA6NIJ5 464 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 FAM90A8PA6NJQ4 464 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 FAM90A7PA6NKC0 464 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 ANKRD30BLA7E2S9 258 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 FAM90A22PA8MWA6 464 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 KIAA1324LA8MWY0 1029 aaPredicted RBP10.94□□□□□ -0.66
LDLR-207ENST00000558013 FAM90A12PA8MX19 464 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 FAM90A5PA8MXJ8 464 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 FAM90A23PA8MXZ1 464 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 CNOT4O95628 575 aaKnown RBP10.94□□□□□ -0.66
LDLR-207ENST00000558013 SERPINE2P07093 398 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 FAM90A15PP0C7V4 464 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 FAM90A13PP0C7W8 464 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 FAM90A14PP0C7W9 464 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 FAM90A24PP0C7X0 464 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 ZNF806P0C7X5 589 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 MPV17LQ2QL34 196 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 NRN1LQ496H8 165 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 MDP1Q86V88 176 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 RAB39BQ96DA2 213 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 SPIN2AQ99865 258 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 SPIN2BQ9BPZ2 258 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 CACNG5Q9UF02 275 aa10.94□□□□□ -0.66
LDLR-207ENST00000558013 OR2C1O95371 312 aa10.93□□□□□ -0.66
LDLR-207ENST00000558013 OR8U8P0C7N1 319 aa10.93□□□□□ -0.66
LDLR-207ENST00000558013 METTL15P1P0C7V9 234 aa10.93□□□□□ -0.66
LDLR-207ENST00000558013 FGF8P55075 233 aaPredicted RBP10.93□□□□□ -0.66
LDLR-207ENST00000558013 PLP2Q04941 152 aa10.93□□□□□ -0.66
LDLR-207ENST00000558013 ICAM4Q14773 271 aa10.93□□□□□ -0.66
LDLR-207ENST00000558013 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.93□□□□□ -0.66
LDLR-207ENST00000558013 ZNF561Q8N587 486 aa10.93□□□□□ -0.66
LDLR-207ENST00000558013 RNASE11Q8TAA1 199 aaKnown RBP10.93□□□□□ -0.66
LDLR-207ENST00000558013 SLC25A31Q9H0C2 315 aa10.93□□□□□ -0.66
LDLR-207ENST00000558013 B4GALT7Q9UBV7 327 aa10.93□□□□□ -0.66
LDLR-207ENST00000558013 DMXL2Q8TDJ6 3036 aa10.93□□□□□ -0.66
LDLR-207ENST00000558013 H0Y980 276 aa10.93□□□□□ -0.66
LDLR-207ENST00000558013 WDR1O75083 606 aa10.93□□□□□ -0.66
LDLR-207ENST00000558013 SRP19P09132 144 aaKnown RBP10.93□□□□□ -0.66
LDLR-207ENST00000558013 PAX6P26367 422 aa10.93□□□□□ -0.66
LDLR-207ENST00000558013 CLN3Q13286 438 aa10.93□□□□□ -0.66
LDLR-207ENST00000558013 TESK1Q15569 626 aa10.93□□□□□ -0.66
LDLR-207ENST00000558013 SSX7Q7RTT5 188 aa10.93□□□□□ -0.66
LDLR-207ENST00000558013 TMPRSS7Q7RTY8 843 aa10.93□□□□□ -0.66
LDLR-207ENST00000558013 SAXO1Q8IYX7 474 aa10.93□□□□□ -0.66
LDLR-207ENST00000558013 OR5D13Q8NGL4 314 aa10.93□□□□□ -0.66
LDLR-207ENST00000558013 DEGS1O15121 323 aa10.93□□□□□ -0.66
LDLR-207ENST00000558013 IFNA4P05014 189 aa10.93□□□□□ -0.66
LDLR-207ENST00000558013 MEOX1P50221 254 aa10.93□□□□□ -0.66
LDLR-207ENST00000558013 CXorf67Q86X51 503 aaPredicted RBP10.93□□□□□ -0.66
LDLR-207ENST00000558013 MCEMP1Q8IX19 187 aa10.93□□□□□ -0.66
LDLR-207ENST00000558013 H1FOOQ8IZA3 346 aaPredicted RBP10.93□□□□□ -0.66
LDLR-207ENST00000558013 CNOT1A5YKK6 2376 aaKnown RBP10.93□□□□□ -0.66
LDLR-207ENST00000558013 CACNA1HO95180 2353 aa10.92□□□□□ -0.66
LDLR-207ENST00000558013 TNRC6AQ8NDV7 1962 aaKnown RBP10.92□□□□□ -0.66
LDLR-207ENST00000558013 CLEC18AA5D8T8 446 aa10.92□□□□□ -0.66
LDLR-207ENST00000558013 CDIPTO14735 213 aa10.92□□□□□ -0.66
LDLR-207ENST00000558013 IGKV1-5P01602 117 aa10.92□□□□□ -0.66
LDLR-207ENST00000558013 APLNRP35414 380 aa10.92□□□□□ -0.66
LDLR-207ENST00000558013 GNG3P63215 75 aa10.92□□□□□ -0.66
LDLR-207ENST00000558013 RNF212Q495C1 297 aa10.92□□□□□ -0.66
LDLR-207ENST00000558013 OR2B11Q5JQS5 317 aa10.92□□□□□ -0.66
LDLR-207ENST00000558013 CLEC18CQ8NCF0 446 aa10.92□□□□□ -0.66
LDLR-207ENST00000558013 OR2J1Q9GZK6 312 aa10.92□□□□□ -0.66
LDLR-207ENST00000558013 OR51I2Q9H344 312 aa10.92□□□□□ -0.66
LDLR-207ENST00000558013 RNF150Q9ULK6 438 aa10.92□□□□□ -0.66
LDLR-207ENST00000558013 RBM7Q9Y580 266 aaKnown RBP10.92□□□□□ -0.66
LDLR-207ENST00000558013 CHD3Q12873 2000 aaKnown RBP10.92□□□□□ -0.66
LDLR-207ENST00000558013 C19orf67A6NJJ6 358 aa10.92□□□□□ -0.66
LDLR-207ENST00000558013 UBE2CO00762 179 aa10.92□□□□□ -0.66
LDLR-207ENST00000558013 HSPA12AO43301 675 aa10.92□□□□□ -0.66
LDLR-207ENST00000558013 MPLP40238 635 aa10.92□□□□□ -0.66
LDLR-207ENST00000558013 AKR1C8PQ5T2L2 129 aa10.92□□□□□ -0.66
LDLR-207ENST00000558013 SP5Q6BEB4 398 aaPredicted RBP10.92□□□□□ -0.66
LDLR-207ENST00000558013 Q6P435 159 aa10.92□□□□□ -0.66
LDLR-207ENST00000558013 LCN15Q6UWW0 184 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms