RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 KIRREL1Q96J84 757 aa11.55□□□□□ -0.56
SUPT16H-208ENST00000557652 C6orf62Q9GZU0 229 aaPredicted RBP11.55□□□□□ -0.56
SUPT16H-208ENST00000557652 TAF9BQ9HBM6 251 aa11.55□□□□□ -0.56
SUPT16H-208ENST00000557652 ING3Q9NXR8 418 aa11.55□□□□□ -0.56
SUPT16H-208ENST00000557652 JPT1Q9UK76 154 aa11.55□□□□□ -0.56
SUPT16H-208ENST00000557652 TBL2Q9Y4P3 447 aaKnown RBP11.55□□□□□ -0.56
SUPT16H-208ENST00000557652 TRAV40A0A0B4J280 105 aa11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 IGHV1-69DA0A0B4J2H0 117 aa11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 CENPVL3A0A0U1RRI6 287 aa11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 TMEM235A6NFC5 223 aa11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 C12orf77C9JDV5 145 aa11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 IGHV1-69P01742 117 aa11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 FCGR3AP08637 254 aa11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 CTXN2P0C2S0 81 aa11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 FAM157CP0CG43 387 aa11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 HOXB4P17483 251 aaPredicted RBP11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 SRD5A1P18405 259 aa11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 RCC1P18754 421 aaPredicted RBP11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 PTBP1P26599 531 aaKnown RBP eCLIP11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 TAS2R20P59543 309 aa11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 HLA-DRB3P79483 266 aa11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 BEND2Q8NDZ0 799 aa11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 OR4A4PQ8NGN8 299 aa11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 CCDC107Q8WV48 283 aa11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 OCSTAMPQ9BR26 566 aa11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 DCUN1D5Q9BTE7 237 aa11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 CLEC7AQ9BXN2 247 aa11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 GHITMQ9H3K2 345 aa11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 ZNF286AQ9HBT8 521 aa11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 SIRT7Q9NRC8 400 aa11.54□□□□□ -0.56
SUPT16H-208ENST00000557652 TRDCB7Z8K6 153 aa11.53□□□□□ -0.56
SUPT16H-208ENST00000557652 RNASEK-C17orf49H0YIS7 233 aa11.53□□□□□ -0.56
SUPT16H-208ENST00000557652 ITGB1BP1O14713 200 aa11.53□□□□□ -0.56
SUPT16H-208ENST00000557652 HBZP02008 142 aa11.53□□□□□ -0.56
SUPT16H-208ENST00000557652 PRSS3P35030 304 aa11.53□□□□□ -0.56
SUPT16H-208ENST00000557652 SSTR5P35346 364 aa11.53□□□□□ -0.56
SUPT16H-208ENST00000557652 PRRX1P54821 245 aa11.53□□□□□ -0.56
SUPT16H-208ENST00000557652 SSBP1Q04837 148 aaKnown RBP11.53□□□□□ -0.56
SUPT16H-208ENST00000557652 MINOS1Q5TGZ0 78 aa11.53□□□□□ -0.56
SUPT16H-208ENST00000557652 ZNF626Q68DY1 528 aa11.53□□□□□ -0.56
SUPT16H-208ENST00000557652 LINC00311Q8N616 119 aa11.53□□□□□ -0.56
SUPT16H-208ENST00000557652 OR9G1Q8NH87 305 aa11.53□□□□□ -0.56
SUPT16H-208ENST00000557652 LHX4Q969G2 390 aa11.53□□□□□ -0.56
SUPT16H-208ENST00000557652 DIRAS2Q96HU8 199 aa11.53□□□□□ -0.56
SUPT16H-208ENST00000557652 ZMAT3Q9HA38 289 aaKnown RBP11.53□□□□□ -0.56
SUPT16H-208ENST00000557652 GFOD1Q9NXC2 390 aa11.53□□□□□ -0.56
SUPT16H-208ENST00000557652 EXTL2Q9UBQ6 330 aa11.53□□□□□ -0.56
SUPT16H-208ENST00000557652 AMMECR1Q9Y4X0 333 aaPredicted RBP11.53□□□□□ -0.56
SUPT16H-208ENST00000557652 MINOS1-NBL1R4GNA1 71 aa11.53□□□□□ -0.56
SUPT16H-208ENST00000557652 IGHV2-26A0A0B4J1V2 119 aa11.52□□□□□ -0.57
SUPT16H-208ENST00000557652 ODF3BA8MYP8 253 aa11.52□□□□□ -0.57
SUPT16H-208ENST00000557652 INAFM1C9JVW0 142 aa11.52□□□□□ -0.57
SUPT16H-208ENST00000557652 SDCBPO00560 298 aaPredicted RBP11.52□□□□□ -0.57
SUPT16H-208ENST00000557652 CTDSP2O14595 271 aa11.52□□□□□ -0.57
SUPT16H-208ENST00000557652 YPEL1O60688 119 aa11.52□□□□□ -0.57
SUPT16H-208ENST00000557652 HLA-DQB1P01920 261 aa11.52□□□□□ -0.57
SUPT16H-208ENST00000557652 LPLP06858 475 aa11.52□□□□□ -0.57
SUPT16H-208ENST00000557652 LGALS4P56470 323 aa11.52□□□□□ -0.57
SUPT16H-208ENST00000557652 LOXL3P58215 753 aa11.52□□□□□ -0.57
SUPT16H-208ENST00000557652 TUSC1Q2TAM9 212 aa11.52□□□□□ -0.57
SUPT16H-208ENST00000557652 KLF17Q5JT82 389 aaPredicted RBP11.52□□□□□ -0.57
SUPT16H-208ENST00000557652 FOXB2Q5VYV0 432 aa11.52□□□□□ -0.57
SUPT16H-208ENST00000557652 OLFML2AQ68BL7 652 aa11.52□□□□□ -0.57
SUPT16H-208ENST00000557652 PYHIN1Q6K0P9 492 aa11.52□□□□□ -0.57
SUPT16H-208ENST00000557652 YPEL2Q96QA6 119 aa11.52□□□□□ -0.57
SUPT16H-208ENST00000557652 CABLES2Q9BTV7 478 aa11.52□□□□□ -0.57
SUPT16H-208ENST00000557652 MS4A7Q9GZW8 240 aaPredicted RBP11.52□□□□□ -0.57
SUPT16H-208ENST00000557652 TOLLIPQ9H0E2 274 aa11.52□□□□□ -0.57
SUPT16H-208ENST00000557652 MIXL1Q9H2W2 232 aa11.52□□□□□ -0.57
SUPT16H-208ENST00000557652 GNG12Q9UBI6 72 aa11.52□□□□□ -0.57
SUPT16H-208ENST00000557652 A0A0A6YYJ9 748 aa11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 OOSP1A8MZH6 123 aa11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 TOR1AO14656 332 aa11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 NPFFO15130 113 aa11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 CTDSPLO15194 276 aa11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 FABP7O15540 132 aa11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 EPHA1P21709 976 aa11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 ZBTB25P24278 435 aa11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 CEACAM3P40198 252 aa11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 AANATQ16613 207 aa11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 PRAMEF5Q5TYX0 476 aa11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 HCP5Q6MZN7 132 aa11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 CNIH2Q6PI25 160 aa11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 ZNF782Q6ZMW2 699 aaPredicted RBP11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 HOGA1Q86XE5 327 aa11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 LAX1Q8IWV1 398 aa11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 ABHD12Q8N2K0 398 aa11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 PNKDQ8N490 385 aa11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 SETD6Q8TBK2 473 aa11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 EDARADDQ8WWZ3 215 aa11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 HDHD3Q9BSH5 251 aaPredicted RBP11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 PRDM13Q9H4Q3 707 aa11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 OR2S2Q9NQN1 319 aa11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 ZNF107Q9UII5 783 aaPredicted RBP11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 ANAPC10Q9UM13 185 aa11.51□□□□□ -0.57
SUPT16H-208ENST00000557652 MXRA5Q9NR99 2828 aa11.5□□□□□ -0.57
SUPT16H-208ENST00000557652 IGLV1-47P01700 117 aa11.5□□□□□ -0.57
SUPT16H-208ENST00000557652 FBP1P09467 338 aa11.5□□□□□ -0.57
SUPT16H-208ENST00000557652 IGHV4-38-2P0DP08 117 aa11.5□□□□□ -0.57
SUPT16H-208ENST00000557652 NAT1P18440 290 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms